arrow
返回
E

Erik van Nimwegen

swiss institute of bioinformatics

56H指数
207论文数
1.9W被引数
收录论文 73
发表时间
err分享
err收藏
MAPP unravels frequent co-regulation of splicing and polyadenylation by RNA-binding proteins and their dysregulation in cancer
err2024-05-15
err3
errOAAI
errBak, Maciej; van Nimwegen, Erik; Kouzel, Ian U.; Gur, Tamer; Schmidt, Ralf; Zavolan, Mihaela; Gruber, Andreas J.
err分享
err收藏
err分享
err收藏
Transcriptional Network Analysis in Muscle Reveals AP-1 as a Partner of PGC-1α in the Regulation of the Hypoxic Gene Program
err2023-03-20
err34
errOAAI
errBaresic, Mario; Salatino, Silvia; Kupr, Barbara; van Nimwegen, Erik; Handschin, Christoph
err分享
err收藏
The Corepressor NCoR1 Antagonizes PGC-1α and Estrogen-Related Receptor α in the Regulation of Skeletal Muscle Function and Oxidative Metabolism
err2023-03-20
err86
errOAAI
errPerez-Schindler, Joaqun; Summermatter, Serge; Salatino, Silvia; Zorzato, Francesco; Beer, Markus; Balwierz, Piotr J.; van Nimwegen, Erik; Feige, Jerome N.; Auwerx, Johan; Handschin, Christoph
err分享
err收藏
Temporal and sequential transcriptional dynamics define lineage shifts in corticogenesis
err2022-11-08
err5
errOAAI
errMukhtar, Tanzila; Breda, Jeremie; Adam, Manal A.; Boareto, Marcelo; Grobecker, Pascal; Karimaddini, Zahra; Grison, Alice; Eschbach, Katja; Chandrasekhar, Ramakrishnan; Vermeul, Swen; Okoniewski, Michal; Pachkov, Mikhail; Harwell, Corey C.; Atanasoski, Suzana; Beisel, Christian; Iber, Dagmar; van Nimwegen, Erik; Taylor, Verdon
err分享
err收藏
Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements
err2022-07-04
err34
errOAAI
errBaranasic, Damir; Hortenhuber, Matthias; Balwierz, Piotr J.; Zehnder, Tobias; Mukarram, Abdul Kadir; Nepal, Chirag; Varnai, Csilla; Hadzhiev, Yavor; Jimenez-Gonzalez, Ada; Li, Nan; Wragg, Joseph; D'Orazio, Fabio M.; Relic, Dorde; Pachkov, Mikhail; Diaz, Noelia; Hernandez-Rodriguez, Benjamin; Chen, Zelin; Stoiber, Marcus; Dong, Michael; Stevens, Irene; Ross, Samuel E.; Eagle, Anne; Martin, Ryan; Obasaju, Oluwapelumi; Rastegar, Sepand; McGarvey, Alison C.; Kopp, Wolfgang; Chambers, Emily; Wang, Dennis; Kim, Hyejeong R.; Acemel, Rafael D.; Naranjo, Silvia; Lapinski, Maciej; Chong, Vanessa; Mathavan, Sinnakaruppan; Peers, Bernard; Sauka-Spengler, Tatjana; Vingron, Martin; Carninci, Piero; Ohler, Uwe; Lacadie, Scott Allen; Burgess, Shawn M.; Winata, Cecilia; van Eeden, Freek; Vaquerizas, Juan M.; Luis Gomez-Skarmeta, Jose; Onichtchouk, Daria; Brown, Ben James; Bogdanovic, Ozren; van Nimwegen, Erik; Westerfield, Monte; Wardle, Fiona C.; Daub, Carsten O.; Lenhard, Boris; Muller, Ferenc
err分享
err收藏
Bayesian inference of gene expression states from single-cell RNA-seq data
err2021-04-29
err42
PREAI
errBreda, Jeremie; Zavolan, Mihaela; van Nimwegen, Erik
err分享
err收藏
Whole genome phylogenies reflect the distributions of recombination rates for many bacterial species
err2021-01-08
err44
errOAAI
errSakoparnig, Thomas; Field, Chris; van Nimwegen, Erik
err分享
err收藏
Tead transcription factors differentially regulate cortical development
err2020-03-13
err41
errOAAI
errMukhtar, Tanzila; Breda, Jeremie; Grison, Alice; Karimaddini, Zahra; Grobecker, Pascal; Iber, Dagmar; Beisel, Christian; van Nimwegen, Erik; Taylor, Verdon
err分享
err收藏
Crunch: integrated processing and modeling of ChIP-seq data in terms of regulatory motifs
err2019-05-28
err6
errOAAI
errBerger, Severin; Pachkov, Mikhail; Arnold, Phil; Omidi, Saeed; Kelley, Nicholas; Salatino, Silvia; van Nimwegen, Erik
err分享
err收藏
Single-cell mRNA profiling reveals the hierarchical response of miRNA targets to miRNA induction
err2018-08-27
err17
errOAAI
errRzepiela, Andrzej J.; Ghosh, Souvik; Breda, Jeremie; Vina-Vilaseca, Arnau; Syed, Afzal P.; Gruber, Andreas J.; Eschbach, Katja; Beisel, Christian; van Nimwegen, Erik; Zavolan, Mihaela
err分享
err收藏
Discovery of physiological and cancer-related regulators of 3′ UTR processing with KAPAC
err2018-03-28
err52
errOAAI
errGruber, Andreas J.; Schmidt, Ralf; Ghosh, Souvik; Martin, Georges; Gruber, Andreas R.; van Nimwegen, Erik; Zavolan, Mihaela
err分享
err收藏
Monitoring single-cell gene regulation under dynamically controllable conditions with integrated microfluidics and software
err2018-01-15
err89
errOAAI
errKaiser, Matthias; Jug, Florian; Julou, Thomas; Deshpande, Siddharth; Pfohl, Thomas; Silander, Olin K.; Myers, Gene; van Nimwegen, Erik
err分享
err收藏
Quantifying the strength of miRNA-target interactions (vol 85, pg 90, 2015)
errMETHODS
IF4.3
err2016-07-01
err1
errOAAI
errBreda, Jeremie; Rzepiela, Andrzej J.; Gumienny, Rafal; van Nimwegen, Erik; Zavolan, Mihaela
err分享
err收藏
The SIB Swiss Institute of Bioinformatics' resources: focus on curated databasesSIB瑞士生物信息学研究所的资源: 专注于精选数据库
err2015-11-28
err44
errOAAI
errBultet, Lisandra Aguilar; Aguilar-Rodriguez, Jose; Ahrens, Christian H.; Ahrne, Erik Lennart; Ai, Ni; Aimo, Lucila; Akalin, Altuna; Aleksiev, Tyanko; Alocci, Davide; Altenhoff, Adrian; Alves, Isabel; Ambrosini, Giovanna; Pedone, Pascale Anderle; Angelina, Paolo; Anisimova, Maria; Appel, Ron; Argoud-Puy, Ghislaine; Arnold, Konstantin; Arpat, Bulak; Artimo, Panu; Ascencao, Kelly; Auchincloss, Andrea; Axelsen, Kristian; Gerritsen, Vivienne Baillie; Bairoch, Amos; Barisal, Parit; Baratin, Delphine; Barbato, Alessandro; Barbie, Valerie; Barras, David; Barreiro, Maria; Barret, Sophie; Bastian, Frederic; Batista Neto, Teresa Manuela; Baudis, Michael; Beaudoing, Emmanuel; Beckmann, Jacques S.; Bekkar, Amel Kawter; Cammoun, Leila Ben Hamida; Benmohammed, Sara; Bernard, Madeleine; Bertelli, Claire; Bertoni, Martino; Bienert, Stefan; Bignucolo, Olivier; Bilbao, Aivett; Bilican, Adem; Blank, Diana; Blatter, Marie-Claude; Blum, Lorenz; Bocquet, Jocelyne; Boeckmann, Brigitte; Bolleman, Jerven Tjalling; Bordoli, Lorenza; Bosshard, Lars; Boucher, Gerard; Bougueleret, Lydie; Boutet, Emmanuel; Bovigny, Christophe; Bratulic, Sinisa; Breuza, Lionel; Bridge, Alan James; Britan, Aurore; Brito, Francisco; Frazao, Josias Brito; Bruggmann, Remy; Bucher, Philipp; Burdet, Frederic; Burger, Lukas; Cabello, Elena Maria; Gomez, Ruben Martin Cabezon; Calderon, Sandra; Cannarozzi, Gina; Carl, Sarah; Casas, Cristina Casals; Catherinet, Sebastien; Perier, Rouayda Cavin; Charpilloz, Christophe; Chaskar, Prasad Datatray; Chen, Weihua; Pepe, Anush Chiappino; Chopard, Bastion; Chu, Hoi Yee; Civic, Natacha; Claassen, Manfred; Clottu, Sylvie; Colombo, Martino; Cosandier, Isabelle; Coudert, Elisabeth; Crespo, Isaac; Creus, Marc; Cuche, Beatrice; Cuendet, Michel A.; Cusin, Isabelle; Daga, Neha; Daina, Antoine; Dauvillier, Jerome; David, Fabrice; Davydov, Iakov; Ferreira, Mariana De Sa Ricca Manadelo; de Beer, Tjaart; de Castro, Edouard; de Santana, Charles; Delafontaine, Julien; Delorenzi, Mauro; Delucinge-Vivier, Celine; Demirel, Oemer; Derham, Robert; Dermitzakis, Emmanouil Manolis; Dib, Linda; Diene, Seydina; Dilek, Nahzli; Dilmi, Julian; Domagalski, Marcin Jakub; Dorier, Julien; Dornevil, Dolnide; Dousse, Aline; Dreos, Rene; Duchen, Pablo; Roggli, Paula Duck; Duperret, Isabelle Dupanloup; Durinx, Christine; Duvaud, Severine; Engler, Robin; Frkek, Scrap; Lopez, Pablo Escobar; Fstreicher, Anne; Excoffier, Laurent; Fabbretti, Roberto; Falcone, Jean-Luc; Falquet, Laurent; Famiglietti, Maria Livia; Ferreira, Anne-Maud; Feuermann, Marc; Filliettaz, Marc; Hegel, Volker; Foucal, Adrien; Franceschini, Andrea; Fucile, Geoffrey; Gaidatzis, Dimos; Garcia, Victor; Gasteiger, Elisabeth; Gateau, Alain; Gatti, Lorenzo; Gaudet, Pascale; Gaudinat, Arnaud; Gehant, Sebastien; Gfeller, David; Gharib, Walid H.; Ghraichy, Marie; Gidoin, Cindy; Gil, Manuel; Gleizes, Anne; Gobeill, Julien; Gonnet, Gaston; Gos, Arnaud; Gotz, Lou; Gouy, Alexandre; Grbic, Djordje; Groux, Romain; Gruaz-Gumowski, Nadine; Grun, Delphine; Gschwind, Andreas; Guex, Nicolas; Gupta, Saumya; Getaz, Michael; Haake, Dennis; Haas, Juergen; Hatzimanikatis, Vassily; Heckel, Gerald; Gardiol, Daniel Federico Hernandez; Hinard, Valerie; Hinz, Ursula; Homicsko, Krisztian; Horlacher, Oliver; Hosseini, Sayed-Rzgar; Hotz, Hans-Rudolf; Hulo, Chantal; Hundsrucker, Christian; Ibberson, Mark; Ilmjarv, Sten; Ioannidis, Vassilios; Ioannidis, Panagiotis; Iseli, Christian; Ivanek, Robert; Iwaszkiewicz, Justyna; Jacquet, Philippe; Jacquot, Martin; Jagannathan, Vidhya; Jan, Maxime; Jensen, Jeffrey; Johansson, Maria U.; Johner, Niklaus; Jungo, Florence; Junier, Thomas; Kahraman, Abdullah; Katsantoni, Maria; Keller, Guillaume; Kerhornou, Arnaud; Khalid, Fahad; Klingbiel, Dirk; Kimljenovic, Andrea; Kriventseva, Evgenia; Kryuchkova, Nadezda; Kumar, Sunil; Kutalik, Zoltan; Kuznetsov, Dmitry; Kuzyakiv, Rostyslav; Lane, Lydie; Lara, Vicente; Ledesma, Leonardo; Leleu, Marion; Lemercier, Philippe; Lew, Daniel; Lieberherr, Damien; Liechti, Robin; Lisacek, Frederique; Fischer, Heidi; Litsios, Glenn; Liu, Jialin; Lombardot, Thierry; Mace, Aurelien; Maffioletti, Sergio; Mahi, Mohamed-Ali; Maiolo, Massimo; Majjigapu, Somi Reddy; Malmstrom, Lars; Mangold, Veronique; Marek, Diana; Mariethoz, Julien; Marin, Ray; Martin, Olivier; Martin, Xavier; Martin-Campos, Trinidad; Mary, Camille; Masclaux, Frederic; Masson, Patrick; Meier, Cecile; Messina, Antonio; Lenoir, Muriel Metrailler; Meyer, Xavier; Michel, Pierre-Andre; Michielin, Olivier; Milanese, Alessi; Missiaglia, Edoardo; Perez, Jorge Molina; Caria, Vanessa Monteiro; Moret, Philippe; Moretti, Sebastien; Morgat, Anne; Mottaz, Anais; Mottin, Luc; Mouscaz, Yoann; Mueller, Markus; Murri, Riccardo; Mylonas, Roman; Neuenschwander, Samuel; Nikitin, Frederic; Niknejad, Anne; Nouspikel, Nevila; Nso, Lydie Nso; Okoniewski, Michal; Omasits, Ulrich; Paccaud, Benjamin; Pachkov, Mikhail; Paesano, Salvo Giacomo; Pagni, Marco; Palagi, Patricia M.; Pasche, Emilie; Payne, Joshua L.; Pedruzzi, Ivo; Peischl, Stephan; Peitsch, Manuel; Perlini, Sabine; Pilbout, Sandrine.; Podvinec, Michael; Pohlmann, Rainer; Polizzi, Davide; Potter, Douglas; Poux, Sylvain; Pozzato, Monica; Pradervand, Sylvain; Praz, Viviane; Pruess, Manuela; Pujadas, Eva; Racle, Julien; Raschi, Marcelo; Ratib, Osman; Rausell, Antonio; de Laval, Valentine Rech; Redaschi, Nicole; Rempfer, Christine; Ren, Guangpeng; Vandati, Reza Ali Rezaee; Rib, Leonor; Grognuz, Oksana Riba; Altimiras, Emma Ricart; Rivoire, Catherine; Robin, Thibault; Robinson-Rechavi, Marc; Rodrigues, Joao; Roechert, Bernd; Roelli, Patrick; Romano, Valentina; Rossier, Gregoire; Roth, Alexander; Rougemont, Jacques; Roux, Julien; Royo, Helene; Ruch, Patrick; Ruinelli, Michela; Rustom, Mohamad; Sates, Abdul; Roehrig, Ute F.; Rueeger, Sina; Salamin, Nicolas; Sankar, Martial; Sarkar, Namrata; Saxenhofer, Moritz; Schaeffer, Mathieu; Schaerli, Yolanda; Schaper, Eike; Schmid, Annette; Schmid, Emanuel; Schmid, Christoph; Schmid, Michael; Schmidt, Sebastian; Schmocker, Daniel; Schneider, Michel; Schuepbach, Thierry; Schwede, Torsten; Schuetz, Frederic; Sengstag, Thierry; Serrano, Martha; Sethi, Atul; Shahmirzadi, Omid; Sigrist, Christian; Silvestro, Daniele; Simao Neto, Felipe Aristides; Simillion, Cedric; Simonovic, Milan; Skunca, Nives; Sluzek, Kasia; Soneson, Charlotte; Sprouffske, Kathleen; Stadler, Michael; Staehli, Sylvie; Stevenson, Brian; Stockinger, Heinz; Straszewski, Jakub; Stricker, Thomas; Studer, Gabriel; Stutz, Andre; Suffiotti, Madeleine; Sundaram, Shyamala; Szklarczyk, Damian; Szovenyi, Peter; Tegenfeldt, Fredrik; Teixeira, Daniel; Tellenbach, Susanne; Smith, Adam Alexander Thil; Tognolli, Michael; Topolsky, Ivan; Thuong Van Du Tran; Tsantoulis, Petros; Tzika, Athanasia C.; Agote, Asier Ullate; van Nimwegen, Erik; von Mering, Christian; Varadarajan, Adithi; Veranneman, Maren; Verbregue, Lance; Veuthey, Anne-Lise; Vishnyakova, Dina; Vyas, Rounak; Wagner, Andreas; Walther, Daniel; Wan, Hon Wai; Wang, Mingcong; Waterhouse, Robert; Waterhouse, Andrew; Wicki, Adrian; Wigger, Leonore; Wirapati, Pratyaksha; Witschi, Ursula; Wyder, Stefan; Wyler, Kurt; Wuethrich, Daniel; Xenarios, Ioannis; Yamada, Kana; Yan, Zheng; Yasrebi, Haleh; Zahn, Monique; Zangger, Nadine; Zdobnov, Evgeny; Zerzion, Daniel; Zoete, Vincent; Zoller, Stefan
err分享
err收藏