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N

Nicholas A. Bokulich

eth zurich

48H指数
181论文数
5.1W被引数
收录论文 63
发表时间
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A standardized collection of human stool and fermented food microbiomes from the Launch Phase of the Microbiota Vault Initiative微生物组保险库计划启动阶段标准化的人类粪便和发酵食品微生物组收集
errScientific Data
IF6.9
err2026-09-29
err0
errOAAI
errAnton Lavrinienko; Vanni Benvenga; Diana Albertos Torres; Youzheng Teo; Jeanne Tamarelle; Margaux M. Crézé; Yuen Yi Li; Christian Hoffmann; Abdifatah Muhummed; Somphou Sayasone; Sengaloun Phonekeo; Phonemany Siengsounthone; Petra Zimmermann; Amma Larbi; Alex Kwarteng; Marcel Houngbédji; Segla Wilfrid Padonou; Chalat Santivarangkna; Dominik Steiger; Manuel Fankhauser; Maria Gloria Dominguez-Bello; Pascale Vonaesch; Adrian Egli; Nicholas A. Bokulich
err分享
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MOSHPIT: Accessible, reproducible metagenome data science on the QIIME 2 frameworkMOSHPIT：基于QIIME 2框架的易获取、可重现的元基因组数据科学
errCell Genomics
IF9
err2026-09-24
err0
errOAAI
errMichal Ziemski; Liz Gehret; Anthony Simard; Santiago Castro Dau; Vinzent Risch; Doriela Grabocka; Christos Matzoros; Colin Wood; Paula Momo Cabrera; Rodrigo Hernández-Velázquez; Milo R. Schärer; Felicia Sandberg; Chloe Herman; Keegan Evans; Michael S. Robeson; Evan Bolyen; J. Gregory Caporaso; Nicholas A. Bokulich
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Unlocking the biotechnological potential of traditional fermented food microbiomes揭示传统发酵食品微生物组的生物技术潜力
errCurrent Opinion in Biotechnology
IF7
err2026-07-06
err0
errOAAI
errRodrigo Hernández-Velázquez; Nicholas A Bokulich
err分享
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Indoor environmental conditions correlate with the microbial landscape of food production facilities across space and time室内环境条件与食品生产设施中微生物景观在空间和时间上的相关性
errFood Microbiology
IF4.6
err2026-07-01
err1
errOAAI
errBokulich, Nicholas A.; Florl, Lena; Beauchemin, Eve; Masarweh, Chad; Sitepu, Irnayuli R.; Kalanetra, Karen; Boulton, Roger; Mills, David A.; Boundy-Mills, Kyria
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Interaction of Environment and Vineyard Management Effects Shape Microbial Functionality, Terroir, and Grape Qualities环境与葡萄园管理效应的相互作用塑造微生物功能、风土和葡萄品质
errPhytobiomes Journal
IF2.6
err2026-05-01
err1
PREAI
errFlorl, Lena; Rueda-Mejia, Maria Paula; Reynard, Jean-Sebastien; Zufferey, Vivian; Mackie-Haas, Kathleen; Frossard, Emmanuel; Bokulich, Nicholas A.
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Spatial heterogeneity and microbial terroir: balancing dispersal limitation and cultivar as drivers of microbial diversity in viticulture空间异质性与微生物风土：平衡微生物多样性的驱动因素——扩散限制与品种在葡萄栽培中的应用
errISME Communications
IF6.1
err2026-03-23
err0
errOAAI
errReid G Griggs; David A Mills; Nicholas A Bokulich
err分享
err收藏
HighALPS: ultra-high-throughput marker-gene amplicon library preparation and sequencing on the Illumina NextSeq and NovaSeq PlatformsHighALPS：基于Illumina NextSeq和NovaSeq平台的超高通量标记基因扩增子文库制备与测序
errmSystems
IF4.6
err2026-02-01
err2
PREAI
errFlorl, Lena; Cabrera, Paula Momo; Moccia, Maria Domenica; Pluss, Serafina; Bokulich, Nicholas A.
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Grape expectations: disentangling environmental drivers of microbiome establishment in winegrowing ecosystems
errnpj Biofilms and Microbiomes
IF9.2
err2026-01-16
err0
errOAAI
errLena Flörl; Patrik Schönenberger; Markus Rienth; Nicholas A. Bokulich
err分享
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Shipped and shifted: modeling collection-induced bias in microbiome multi-omics using a tractable fermentation system已运输和转移：使用可处理的发酵系统对微生物组多组学中的采集诱导偏倚进行建模
errnpj Biofilms and Microbiomes
IF9.2
err2026-01-09
err0
errOAAI
errAnnina R. Meyer; Jan Patrick Tan; Mihnea Paul Mihaila; Michelle Neugebauer; Laura Nyström; Nicholas A. Bokulich
err分享
err收藏
FAIRer DNA sequence data with q2-ena-uploader: a QIIME 2 plugin for data deposition in the European Nucleotide Archive通过q2-ena-uploader实现更公平的DNA序列数据：一个用于欧洲核苷酸库数据存档的QIIME 2插件
errMicrobiology Resource Announcements
IF0.6
err2026-01-01
err1
PREAI
errSebechlebska, Zuzana; Ziemski, Michal; Bokulich, Nicholas A.
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Impacts of food additive sweeteners and emulsifiers on the gut microbiome: research trends and future directions食品添加剂甜味剂和乳化剂对肠道微生物组的影响：研究趋势与未来方向
errTrends in Food Science & Technology
IF15.4
err2025-10-09
err0
errOAAI
errAnton Lavrinienko; Anna Greppi; Salome Häcki; Dariya Paramonova; Nicholas A. Bokulich
err分享
err收藏
Tier-based standards for FAIR sequence data and metadata sharing in microbiome research基于分级的FAIR序列数据与元数据共享标准在微生物组研究中的应用
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-08-28
err1
errOAAI
errKim, Lina; Lavrinienko, Anton; Sebechlebska, Zuzana; Stoltenberg, Sven; Bokulich, Nicholas A.
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The genetic basis of microbiome recruitment in grapevine and its association with fermentative and pathogenic taxa葡萄藤微生物组招募的遗传基础及其与发酵性和致病性类群的关联
errNew Phytologist
IF8.1
err2025-07-22
err0
errOAAI
errLena Flörl; Jerry Lin; Reid G. Griggs; Mélanie Massonnet; Noé Cochetel; Rosa Figueroa-Balderas; Dario Cantù; Nicholas A. Bokulich
err分享
err收藏
The Oral Microbiome and All-Cause Mortality in a US Population-Representative Prospective Cohort口腔微生物组与全因死亡率：一项美国人群代表性前瞻性队列研究
errJOURNAL OF INFECTIOUS DISEASES
IF4.5
err2025-07-01
err1
PREAI
errVogtmann, Emily; Yano, Yukiko; Shi, Jianxin; Wan, Yunhu; Purandare, Vaishnavi; McLean, Jody; Li, Shilan; Knight, Rob; Kahle, Lisa; Hullings, Autumn G.; Hua, Xing; Graubard, Barry, I; Gillison, Maura L.; Caporaso, J. Gregory; Bokulich, Nicholas A.; Blaser, Martin J.; Freedman, Neal D.; Chaturvedi, Anil K.; Abnet, Christian C.
err分享
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Standardizing a microbiome pipeline for body fluid identification from complex crime scene stains标准化一种用于从复杂犯罪现场污渍中鉴定体液的微生物组分析流程
errAPPLIED AND ENVIRONMENTAL MICROBIOLOGY
IF3.7
err2025-05-21
err0
errOAAI
errSwayambhu, Meghna; Gysi, Mario; Haas, Cordula; Schuh, Larissa; Walser, Larissa; Javanmard, Fardin; Flury, Tamara; Ahannach, Sarah; Lebeer, Sarah; Hanssen, Eirik; Snipen, Lars; Bokulich, Nicholas A.; Kummerli, Rolf; Arora, Natasha
err分享
err收藏
Tertiary Lymphoid Organs Are Associated With Bacterial Dysbiosis in Chronic Rhinosinusitis三级淋巴器官与慢性鼻窦炎中的细菌菌群失调相关
errInternational Forum of Allergy & Rhinology
IF6.8
err2025-05-15
err0
errOAAI
errSathish Paramasivan; Ahmed Bassiouni; Nicholas A. Bokulich; Mahnaz Ramezanpour; Clare Cooksley; J. Gregory Caporasso; Shaun R. McColl
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Oral Microbiome Profile of the US Population美国人群口腔微生物组特征
errJAMA NETWORK OPEN
IF9.7
err2025-05-05
err0
errOAAI
errChaturvedi, Anil K.; Vogtmann, Emily; Shi, Jianxin; Yano, Yukiko; Blaser, Martin J.; Bokulich, Nicholas A.; Caporaso, J. Gregory; Gillison, Maura L.; Graubard, Barry I.; Hua, Xing; Hullings, Autumn G.; Kahle, Lisa; Knight, Rob; Li, Shilan; McLean, Jody; Purandare, Vaishnavi; Wan, Yunhu; Freedman, Neal D.; Abnet, Christian C.
err分享
err收藏
Integrating sequence composition information into microbial diversity analyses with k-mer frequency counting
errMSYSTEMS
IF4.6
err2025-02-20
err1
errOAAI
errBokulich, Nicholas A.
err分享
err收藏
Evaluating stool microbiome integrity after domestic freezer storage using whole-metagenome sequencing, genome assembly, and antimicrobial resistance gene analysis使用全基因组测序，基因组组装和抗菌素耐药性基因分析评估家庭冰箱储存后的粪便微生物组完整性
errMICROBIOLOGY SPECTRUM
IF3.8
err2025-02-11
err1
errOAAI
errCabrera, Paula Momo; Bokulich, Nicholas A.; Zimmermann, Petra
err分享
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Bioinformatics challenges for profiling the microbiome in cancer: pitfalls and opportunities
errTRENDS IN MICROBIOLOGY
IF14.9
err2024-12-01
err0
errOAAI
errBokulich, Nicholas A.; Robeson II, Michael S.
err分享
err收藏

研究方向

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