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Sergey Ovchinnikov

massachusetts institute of technology

51H指数
167论文数
3.2W被引数
收录论文 45
发表时间
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Learning millisecond protein dynamics from what is missing in NMR spectra从NMR谱中缺失的信息学习毫秒级蛋白质动力学
errNature
IF48.5
err2026-08-10
err0
PREAI
errHannah K. Wayment-Steele; Gina El Nesr; Ramith Hettiarachchi; Adedolapo M. Ojoawo; Hasindu Kariyawasam; Sergey Ovchinnikov; Dorothee Kern
err分享
err收藏
Expanding the scope of protein language modeling to protein-protein interactions with MSA Pairformer将蛋白质语言建模的范围扩展到蛋白质-蛋白质相互作用，使用多序列比对配对转换器
errCell
IF42.5
err2026-07-21
err0
errOAAI
errYo Akiyama; Zhidian Zhang; Olivia Tang; Rachel Seongeun Kim; Milot Mirdita; Martin Steinegger; Sergey Ovchinnikov
err分享
err收藏
Toward life with a 19–amino acid alphabet through generative artificial intelligence design通过生成式人工智能设计实现包含19种氨基酸字母表的生物合成
errScience
IF45.8
err2026-04-30
err0
PREAI
errLiyuan Liu; Charlotte Rochereau; Simon Kozlov; Guillaume Urtecho; Xiaonan Liu; Jiahui Zhao; Jasmine Wang; Yiming Huang; Yiming Qu; Zetian Zhang; Tomasz Blazejewski; Avi Swartz; Sergey Ovchinnikov; Harris H. Wang
err分享
err收藏
Stable de novo protein design via joint conformational landscape and sequence optimization通过结合构象景观和序列优化的稳定从头蛋白质设计
errNature Communications
IF15.7
err2025-12-24
err0
errOAAI
errYehlin Cho; Justas Dauparas; Kotaro Tsuboyama; Gabriel J. Rocklin; Sergey Ovchinnikov
err分享
err收藏
Designing novel solenoid proteins with in silico evolution设计具有计算机模拟进化的新型螺线管蛋白
errCommunications Chemistry
IF6.2
err2025-12-04
err0
errOAAI
errDaniella Pretorius; Georgi I. Nikov; Kono Washio; Steve-William Florent; Henry N. Taunt; Sergey Ovchinnikov; James W. Murray
err分享
err收藏
Democratizing protein language model training, sharing and collaboration蛋白质语言模型训练、共享和协作民主化
errNature Biotechnology
IF41.7
err2025-10-24
err0
PREAI
errJin Su; Zhikai Li; Tianli Tao; Chenchen Han; Yan He; Fengyuan Dai; Qingyan Yuan; Yuan Gao; Tong Si; Xuting Zhang; Yuyang Zhou; Junjie Shan; Xibin Zhou; Xing Chang; Shiyu Jiang; Dacheng Ma; Martin Steinegger; Sergey Ovchinnikov; Fajie Yuan
err分享
err收藏
One-shot design of functional protein binders with BindCraft使用BindCraft进行功能性蛋白质结合物的一体化设计
errNature
IF48.5
err2025-08-27
err0
errOAAI
errMartin Pacesa; Lennart Nickel; Christian Schellhaas; Joseph Schmidt; Ekaterina Pyatova; Lucas Kissling; Patrick Barendse; Jagrity Choudhury; Srajan Kapoor; Ana Alcaraz-Serna; Yehlin Cho; Kourosh H. Ghamary; Laura Vinué; Brahm J. Yachnin; Andrew M. Wollacott; Stephen Buckley; Adrie H. Westphal; Simon Lindhoud; Sandrine Georgeon; Casper A. Goverde; Georgios N. Hatzopoulos; Pierre Gönczy; Yannick D. Muller; Gerald Schwank; Daan C. Swarts; Alex J. Vecchio; Bernard L. Schneider; Sergey Ovchinnikov; Bruno E. Correia
err分享
err收藏
De novo design of a peptide modulator to reverse sodium channel dysfunction linked to cardiac arrhythmias and epilepsy从头设计一种肽类调节剂，以逆转与心律失常和癫痫相关的钠通道功能障碍
errCell
IF42.5
err2025-08-18
err0
PREAI
errRyan Mahling; Bence Hegyi; Erin R. Cullen; Timothy M. Cho; Aaron R. Rodriques; Lucile Fossier; Marc Yehya; Lin Yang; Bi-Xing Chen; Alexander N. Katchman; Nourdine Chakouri; Ruiping Ji; Elaine Y. Wan; Jared Kushner; Steven O. Marx; Sergey Ovchinnikov; Christopher D. Makinson; Donald M. Bers; Manu Ben-Johny
err分享
err收藏
Does sequence clustering confound AlphaFold2?序列聚类是否会影响AlphaFold2？
errJournal of Molecular Biology
IF4.5
err2025-08-06
err0
errOAAI
errHannah K. Wayment-Steele; Sergey Ovchinnikov; Lucy Colwell; Dorothee Kern
err分享
err收藏
Accurate de novo design of high-affinity protein-binding macrocycles using deep learning使用深度学习精确从头设计高亲和力蛋白质结合大环
errNature Chemical Biology
IF13.7
err2025-06-20
err0
errOAAI
errStephen A. Rettie; David Juergens; Victor Adebomi; Yensi Flores Bueso; Qinqin Zhao; Alexandria N. Leveille; Andi Liu; Asim K. Bera; Joana A. Wilms; Alina Üffing; Alex Kang; Evans Brackenbrough; Mila Lamb; Stacey R. Gerben; Analisa Murray; Paul M. Levine; Maika Schneider; Vibha Vasireddy; Sergey Ovchinnikov; Oliver H. Weiergräber; Dieter Willbold; Joshua A. Kritzer; Joseph D. Mougous; David Baker; Frank DiMaio; Gaurav Bhardwaj
err分享
err收藏
Artificial intelligence methods for protein folding and design蛋白质折叠与设计的人工智能方法
errCurrent Opinion in Structural Biology
IF7
err2025-06-11
err0
PREAI
errZhidian Zhang; Chenxi Ou; Yehlin Cho; Yo Akiyama; Sergey Ovchinnikov
err分享
err收藏
Easy and accurate protein structure prediction using ColabFold使用ColabFold进行简单而准确的蛋白质结构预测
errNATURE PROTOCOLS
IF16
err2024-10-14
err1
PREAI
errKim, Gyuri; Lee, Sewon; Karin, Eli Levy; Kim, Hyunbin; Moriwaki, Yoshitaka; Ovchinnikov, Sergey; Steinegger, Martin; Mirdita, Milot
err分享
err收藏
Integrated structure prediction of protein-protein docking with experimental restraints using ColabDock (vol 6, pg 924, 2024)
errNATURE MACHINE INTELLIGENCE
IF23.9
err2024-09-10
err0
PREAI
errFeng, Shihao; Chen, Zhenyu; Zhang, Chengwei; Xie, Yuhao; Ovchinnikov, Sergey; Gao, Yi Qin; Liu, Sirui
err分享
err收藏
Integrated structure prediction of protein-protein docking with experimental restraints using ColabDock使用ColabDock进行具有实验约束的蛋白质-蛋白质对接的集成结构预测
errNATURE MACHINE INTELLIGENCE
IF23.9
err2024-08-05
err1
PREAI
errFeng, Shihao; Chen, Zhenyu; Zhang, Chengwei; Xie, Yuhao; Ovchinnikov, Sergey; Gao, Yi Qin; Liu, Sirui
err分享
err收藏
Genomic language model predicts protein co-regulation and function
errNATURE COMMUNICATIONS
IF15.7
err2024-04-03
err9
errOAAI
errHwang, Yunha; Cornman, Andre L.; Kellogg, Elizabeth H.; Ovchinnikov, Sergey; Girguis, Peter R.
err分享
err收藏
NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomesNMPFamsDB: 来自微生物宏基因组和元基因组的新型蛋白质家族数据库
errNUCLEIC ACIDS RESEARCH
IF13.1
err2023-10-09
err4
errOAAI
errBaltoumas, Fotis A.; Karatzas, Evangelos; Liu, Sirui; Ovchinnikov, Sergey; Sofianatos, Yorgos; Chen, I-Min; Kyrpides, Nikos C.; Pavlopoulos, Georgios A.
err分享
err收藏
De novo design of small beta barrel proteins小 β 桶蛋白的从头设计
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-03-10
err19
errOAAI
errKim, David E.; Jensen, Davin R.; Feldman, David; Tischer, Doug; Saleem, Ayesha; Chow, Cameron M.; Li, Xinting; Carter, Lauren; Milles, Lukas; Nguyen, Hannah; Kang, Alex; Bera, Asim K.; Peterson, Francis C.; Volkman, Brian F.; Ovchinnikov, Sergey; Baker, David
err分享
err收藏
Co-evolution-based prediction of metal-binding sites in proteomes by machine learning
errNATURE CHEMICAL BIOLOGY
IF13.7
err2023-01-02
err19
PREAI
errCheng, Yao; Wang, Haobo; Xu, Hua; Liu, Yuan; Ma, Bin; Chen, Xuemin; Zeng, Xin; Wang, Xianghe; Wang, Bo; Shiau, Carina; Ovchinnikov, Sergey; Su, Xiao-Dong; Wang, Chu
err分享
err收藏
Computational design of constitutively active cGAS
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2023-01-02
err8
PREAI
errDowling, Quinton M.; Volkman, Hannah E.; Gray, Elizabeth E.; Ovchinnikov, Sergey; Cambier, Stephanie; Bera, Asim K.; Sankaran, Banumathi; Johnson, Max R.; Bick, Matthew J.; Kang, Alex; Stetson, Daniel B.; King, Neil P.
err分享
err收藏
A structural biology community assessment of AlphaFold2 applications对AlphaFold2应用的结构生物学社区评估
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2022-11-07
err259
errOAAI
errAkdel, Mehmet; Pires, Douglas E., V; Porta Pardo, Eduard; Janes, Jurgen; Zalevsky, Arthur O.; Meszaros, Balint; Bryant, Patrick; Good, Lydia L.; Laskowski, Roman A.; Pozzati, Gabriele; Shenoy, Aditi; Zhu, Wensi; Kundrotas, Petras; Serra, Victoria Ruiz; Rodrigues, Carlos H. M.; Dunham, Alistair S.; Burke, David; Borkakoti, Neera; Velankar, Sameer; Frost, Adam; Basquin, Jerome; Lindorff-Larsen, Kresten; Bateman, Alex; Kajava, Andrey, V; Valencia, Alfonso; Ovchinnikov, Sergey; Durairaj, Janani; Ascher, David B.; Thornton, Janet M.; Davey, Norman E.; Stein, Amelie; Elofsson, Arne; Croll, Tristan, I; Beltrao, Pedro
err分享
err收藏

研究方向

暂时未获取到该数据
合作学者
合作期刊
J
Janet M. Thornton
H 指数: 135 · 论文数: 784
A
Alfonso Valencia
H 指数: 127 · 论文数: 866
D
Donald M. Bers
H 指数: 127 · 论文数: 840
H
Harold A. Scheraga
H 指数: 126 · 论文数: 1.4K
N
Nikos C. Kyrpides
H 指数: 116 · 论文数: 945
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