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Ultra-high-scale cytometry-based cellular interaction mapping

delete2025-08-07
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OA
AI
D
Dominik Vonficht
L
Lea Jopp‐Saile
S
Schayan Yousefian
V
Viktoria Flore
I
Inés Simó Vesperinas
R
Ruth Teuber
B
Bogdan Avanesyan
Y
Yanjiang Luo
C
Caroline Röthemeier
F
Florian Grünschläger
M
Mirian Fernández-Vaquero
V
Vincent Fregona
D
Diana Ordoñez‐Rueda
L
Laura K. Schmalbrock
L
Luca Deininger
A
Angelo Jovin Yamachui Sitcheu
Z
Zuguang Gu
M
Maja C. Funk
R
Ralf Mikut
M
Mathias Heikenwälder
A
Angelika Eggert
A
Arend von Stackelberg
S
Sebastian Kobold
J
Jan Krönke
U
Ulrich Keller
A
Andreas Trumpp
A
Ahmed N. Hegazy
C
Cornelia Eckert
D
Daniel Hübschmann *
S
Simon Haas *
DOI:10.1038/s41592-025-02744-wdelete
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摘要

摘要

En 中文
细胞相互作用具有基础性重要意义,在调控机体发育、组织稳态和免疫应答中发挥关键作用。近年来,已开发出利用单细胞基因组技术解析物理接触细胞的强大方法。然而,这些方法的特点是细胞通量低、处理时间长、成本高,且通常仅限于预定义的细胞类型。在此,我们介绍Interact-omics,一种基于流式细胞术的框架,能够以超高通量和分辨率精确绘制所有免疫细胞类型的细胞景观和细胞相互作用。我们展示了该方法的实用性,用于研究免疫治疗的动力学、作用机制和个性化响应预测,以及感染后体内全机体范围内的细胞组成变化和细胞相互作用动态。我们的可扩展框架可应用于现有流式细胞术数据集进行后续分析,或整合到新设计的基于流式细胞术的研究中,以绘制细胞相互作用,其应用范围广泛,从基础生物学到应用生物医学。Interact-omics,一种高通量、基于流式细胞术的框架,解析了细胞相互作用的景观。

期刊

Nature Methods 封面图
Nature Methods
IF:
32.1
论文数:
7.3K
被引数:
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机构

H
Helmholtz Zentrum München
学者数:
236
论文数: 77
被引数: 2.2W
G
German Cancer Research Center (DKFZ)
学者数:
1.5W
论文数: 1.1W
被引数: 17
E
european molecular biology laboratory (embl)
学者数:
8.3K
论文数: 5.1K
被引数: 31
F
Faculty of Biosciences
学者数:
75
论文数: 36
被引数: 0
I
Institute for Automation and Applied Informatics
学者数:
14
论文数: 6
被引数: 0
C
Charité – Universitätsmedizin Berlin
学者数:
561
论文数: 200
被引数: 2
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