arrow
Return

Dose-Response Activity-Based DNA-Encoded Library Screening

delete2023-08-21
delete7
delete
OA
AI
P
Patrick R. Fitzgerald
W
Wesley G. Cochrane
B
Brian M. Paegel *
DOI:10.1021/acsmedchemlett.3c00159delete
deleteOriginal
deleteShare
deleteSave
View PDF
Abstract

Abstract

En 中文
Dose-response, or conforming behavior,increasesconfidence in a screening hit's authenticity. Here, we demonstratedose-response solid-phase DNA-encoded library (DEL) screening.Compound dose in microfluidic droplets is modulated via the UV intensityof photocleavage from DEL beads. A 55,296-member DEL was screenedat different UV intensities against model enzyme drug targets factorXa (FXa) and autotaxin (ATX). Both screens yielded photochemical dose-dependenthit rates (FXa hit rates of 0.08/0.05% at 100/30% UV exposure; ATXhit rates of 0.24/0.08% at 100/20% UV exposure). FXa hits containedstructures reflective of FXa inhibitors and four hits inhibited FXa(IC50 = 4.2 & PLUSMN; 0.1, 7.4 & PLUSMN; 0.3, 9.0 & PLUSMN; 0.3,and 19 & PLUSMN; 2 & mu;M.) The top ATX hits (two dihydrobenzamidazolonesand a tetrahydroisoquinoline) were validated as inhibitors (IC50 = 7 & PLUSMN; 2, 13 & PLUSMN; 2, and 1 & PLUSMN; 0.3 & mu;M). Photochemicaldose-response DEL screening data prioritized hits for synthesis,the rate-limiting step in DEL lead identification.
Keywords:
microfluidic
miniaturization
assay development
protease inhibition
phosphodiesterase inhibition
combinatorial chemistry
AI Summary

AI Summary

Key information extracted from the uploaded paper, including a brief overview, abstract, background, key highlights, visual analysis, and future outlook.

Journal

ACS Medicinal Chemistry Letters cover
ACS Medicinal Chemistry Letters
IF:
4
Papers:
4.4K
Citations:
10.0K

Organization

S
Scripps Research Institute
Scholars:
1.1W
Papers: 8.3K
Citations: 2.3W
University of California System cover
University of California System
Scholars:
37.7W
Papers: 33.8W
Citations: 6.6K
Cited Papers

Cited Papers

Regulation of adrenal steroidogenesis during chronic stress
err2012-05-12
err0
PREAI
errGreti Aguilera; Alexander Kiss; Andrew Lu; Cheri Camacho
errShare
errSave
Novel Autotaxin Inhibitors for the Treatment of Osteoarthritis Pain: Lead Optimization via Structure-Based Drug Design
err2016-08-02
err50
errOAAI
errJones, Spencer B.; Pfeifer, Lance A.; Bleisch, Thomas J.; Beauchamp, Thomas J.; Durbin, Jim D.; Klimkowski, V. Joseph; Hughes, Norman E.; Rito, Christopher J.; Dao, Yen; Gruber, Joseph M.; Bui, Hai; Chambers, Mark G.; Chandrasekhar, Srinivasan; Lin, Chaohua; McCann, Denis J.; Mudra, Daniel R.; Oskins, Jennifer L.; Swearingen, Craig A.; Thirunavukkarasu, Kannan; Norman, Bryan H.
errShare
errSave
DNA-Encoded Library Screening Identifies Benzo[b][1,4]oxazepin-4-ones as Highly Potent and Monoselective Receptor Interacting Protein 1 Kinase Inhibitors
err2016-02-23
err259
errOAAI
errHarris, Philip A.; King, Bryan W.; Bandyopadhyay, Deepak; Berger, Scott B.; Campobasso, Nino; Capriotti, Carol A.; Cox, Julie A.; Dare, Lauren; Dong, Xiaoyang; Finger, Joshua N.; Grady, LaShadric C.; Hoffmann, Sandra J.; Jeong, Jae U.; Kang, James; Kasparcova, Viera; Lakdawala, Ami S.; Lehr, Ruth; McNulty, Dean E.; Nagilla, Rakesh; Ouellette, Michael T.; Pao, Christina S.; Rendina, Alan R.; Schaeffer, Michelle C.; Summerfield, Jennifer D.; Swift, Barbara A.; Totoritis, Rachel D.; Ward, Paris; Zhang, Aming; Zhang, Daohua; Marquis, Robert W.; Bertin, John; Gough, Peter J.
errShare
errSave
DNA-Encoded Library Hit Confirmation: Bridging the Gap Between On-DNA and Off-DNA Chemistry
err2021-06-03
err20
errOAAI
errXia, Bing; Franklin, G. Joseph; Lu, Xiaojie; Bedard, Katie L.; Grady, LaShadric C.; Summerfield, Jennifer D.; Shi, Eric X.; King, Bryan W.; Lind, Kenneth E.; Chiu, Cynthia; Watts, Eleanor; Bodmer, Vera; Bai, Xiaopeng; Marcaurelle, Lisa A.
errShare
errSave
Discovery of a First-in-Class Receptor Interacting Protein 1 (RIP1) Kinase Specific Clinical Candidate (GSK2982772) for the Treatment of Inflammatory Diseases
err2017-02-10
err427
PREAI
errHarris, Philip A.; Berger, Scott B.; Jeong, Jae U.; Nagilla, Rakesh; Bandyopadhyay, Deepak; Campobasso, Nino; Capriotti, Carol A.; Cox, Julie A.; Dare, Lauren; Dong, Xiaoyang; Eidam, Patrick M.; Finger, Joshua N.; Hoffman, Sandra J.; Kang, James; Kasparcova, Viera; King, Bryan W.; Lehr, Ruth; Lan, Yunfeng; Leister, Lara K.; Lich, John D.; MacDonald, Thomas T.; Miller, Nathan A.; Ouellette, Michael T.; Pao, Christina S.; Rahman, Attiq; Reilly, Michael A.; Rendina, Alan R.; Rivera, Elizabeth J.; Schaeffer, Michelle C.; Sehon, Clark A.; Singhaus, Robert R.; Sun, Helen H.; Swift, Barbara A.; Totoritis, Rachel D.; Vossenkaemper, Anna; Ward, Paris; Wisnoski, David D.; Zhang, Daohua; Marquis, Robert W.; Gough, Peter J.; Bertin, John
errShare
errSave
Discovery of a Tetrahydropyrimidin-2(1H)-one Derivative (TAK-442) as a Potent, Selective, and Orally Active Factor Xa Inhibitor
err2010-03-31
err55
PREAI
errFujimoto, Takuya; Imaeda, Yasuhiro; Konishi, Noriko; Hiroe, Katsuhiko; Kawamura, Masaki; Textor, Garret P.; Aertgeerts, Kathleen; Kubo, Keiji
errShare
errSave
Data Warrior: An Open-Source Program For Chemistry Aware Data Visualization And Analysis
err2015-02-02
err1.3K
PREAI
errSander, Thomas; Freyss, Joel; von Korff, Modest; Rufener, Christian
errShare
errSave
researcher View more