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D

Daniel Dimitrov

Ruprecht Karls University Heidelberg

15H-index
69Paper Count
3.0KCitation Count
Published Papers 12
Publication Date
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Interpretation, extrapolation and perturbation of single cells
errNature Reviews Genetics
IF52
err2026-01-02
err0
PREAI
errDaniel Dimitrov; Stefan Schrod; Martin Rohbeck; Oliver Stegle
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errSave
OmniPath: integrated knowledgebase for multi-omics analysis
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-11-01
err1
errOAAI
errTurei, Denes; Schaul, Jonathan; Palacio-Escat, Nicolas; Bohar, Balazs; Bai, Yunfan; Ceccarelli, Francesco; Cevrim, Elif; Daley, Macabe; Darcan, Melih; Dimitrov, Daniel; Dogan, Tunca; Domingo-Fernandez, Daniel; Dugourd, Aurelien; Gabor, Attila; Gul, Lejla; Hall, Benjamin A.; Hoyt, Charles Tapley; Ivanova, Olga; Klein, Michal; Lawrence, Toby; Mananes, Diego; Modos, Dezso; Muller-Dott, Sophia; Olbei, Marton; Schmidt, Christina; Sen, Bunyamin; Theis, Fabian J.; Unlu, Atabey; Ulusoy, Erva; Valdeolivas, Alberto; Korcsmaros, Tamas; Saez-Rodriguez, Julio
errShare
errSave
Defining and benchmarking open problems in single-cell analysis
errNature Biotechnology
IF41.7
err2025-07-01
err0
errOAAI
errMalte D. Luecken; Scott Gigante; Daniel B. Burkhardt; Robrecht Cannoodt; Daniel C. Strobl; Nikolay S. Markov; Luke Zappia; Giovanni Palla; Wesley Lewis; Daniel Dimitrov; Michael E. Vinyard; D. S. Magruder; Michaela F. Mueller; Alma Andersson; Emma Dann; Qian Qin; Dominik J. Otto; Michal Klein; Olga Borisovna Botvinnik; Louise Deconinck; Kai Waldrant; Sai Nirmayi Yasa; Artur Szałata; Andrew Benz; Zhijian Li; Jonathan M. Bloom; Angela Oliveira Pisco; Julio Saez-Rodriguez; Drausin Wulsin; Luca Pinello; Yvan Saeys; Fabian J. Theis; Smita Krishnaswamy
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errSave
Unveiling the role of sex in the metabolism of indoxyl sulfate and apixaban
errSCIENTIFIC REPORTS
IF3.9
err2025-02-19
err0
errOAAI
errPina-Beltran, Blanca; Dimitrov, Daniel; Mckay, Nathalie; Giot, Matthieu; Zdrahal, Zbynek; Potesil, David; Pustka, Vaclav; Peinado-Izaguerri, Jorge; Saez-Rodriguez, Julio; Poitevin, Stephane; Burtey, Stephane
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errSave
LIANA plus provides an all-in-one framework for cell-cell communication inference
errNATURE CELL BIOLOGY
IF19.1
err2024-09-02
err4
errOAAI
errDimitrov, Daniel; Schaefer, Philipp Sven Lars; Farr, Elias; Rodriguez-Mier, Pablo; Lobentanzer, Sebastian; Badia-i-Mompel, Pau; Dugourd, Aurelien; Tanevski, Jovan; Flores, Ricardo Omar Ramirez; Saez-Rodriguez, Julio
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errSave
MetalinksDB: a flexible and contextualizable resource of metabolite-protein interactions
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-07-22
err2
errOAAI
errFarr, Elias; Dimitrov, Daniel; Schmidt, Christina; Turei, Denes; Lobentanzer, Sebastian; Dugourd, Aurelien; Saez-Rodriguez, Julio
errShare
errSave
Combining LIANA and Tensor-cell2cell to decipher cell-cell communication across multiple samples
errCELL REPORTS METHODS
IF4.5
err2024-04-01
err1
errOAAI
errBaghdassarian, Hratch M.; Dimitrov, Daniel; Armingol, Erick; Saez-Rodriguez, Julio; Lewis, Nathan E.
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errSave
Integrating single-cell multi-omics and prior biological knowledge for a functional characterization of the immune system
errNATURE IMMUNOLOGY
IF27.6
err2024-02-27
err3
PREAI
errSchaefer, Philipp Sven Lars; Dimitrov, Daniel; Villablanca, Eduardo J.; Saez-Rodriguez, Julio
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errSave
Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease
errELIFE
IF0
err2023-11-22
err17
errOAAI
errFlores, Ricardo Omar Ramirez; Lanzer, Jan David; Dimitrov, Daniel; Velten, Britta; Saez-Rodriguez, Julio
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errSave
Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
errNATURE COMMUNICATIONS
IF15.7
err2022-06-09
err180
errOAAI
errDimitrov, Daniel; Tuerei, Denes; Garrido-Rodriguez, Martin; Burmedi, Paul L.; Nagai, James S.; Boys, Charlotte; Flores, Ricardo O. Ramirez; Kim, Hyojin; Szalai, Bence; Costa, Ivan G.; Valdeolivas, Alberto; Dugourd, Aurelien; Saez-Rodriguez, Julio
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errSave
How will artificial intelligence and bioinformatics change our understanding of IgA Nephropathy in the next decade? (Apr, 10.1007/s00281-021-00847-y, 2021)
errSEMINARS IN IMMUNOPATHOLOGY
IF9.2
err2021-05-07
err0
errOAAI
errBulow, Roman David; Dimitrov, Daniel; Boor, Peter; Saez-Rodriguez, Julio
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errSave
How will artificial intelligence and bioinformatics change our understanding of IgA in the next decade?
errSEMINARS IN IMMUNOPATHOLOGY
IF9.2
err2021-04-09
err17
errOAAI
errBuelow, Roman David; Dimitrov, Daniel; Boor, Peter; Saez-Rodriguez, Julio
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
F
Fabian J. Theis
H-index: 125 · Papers: 1.1K
O
Oliver Stegle
H-index: 112 · Papers: 512
J
Julio Sáez-Rodríguez
H-index: 91 · Papers: 651
Y
Yvan Saeys
H-index: 82 · Papers: 480
P
Peter Boor
H-index: 82 · Papers: 792
View more