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J

Jo Vandesompele

ghent university

96H-index
803Paper Count
7.5WCitation Count
Published Papers 243
Publication Date
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A living biobank of sarcoma patient-derived cell cultures reveals multi-omic and functional insights that capture disease heterogeneity
errClinical and Translational Medicine
IF6.8
err2026-07-30
err0
errOAAI
errStefanie Gijsels; Suzanne Fischer; David Creytens; Sándor Dedeyne; Felix De Vuyst; Cláudio Pinheiro; Fleur Cordier; Sarah-Lee Bekaert; Nadine Van Roy; Kaat Durinck; Jarne Pauwels; Kris Gevaert; Pieter Mestdagh; Jo Vandesompele; Pekka Rappu; Jyrki Heino; An Hendrix; Gabrielle H. van Ramshorst; Gwen Sys; Olivier De Wever
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errSave
Benchmarking DNA barcode decoding strategies under high error rates
errBMC Bioinformatics
IF3.3
err2026-06-23
err0
errOAAI
errFranco Poma-Soto; Hanne Van Droogenbroeck; Brecht Soulliaert; Maya Giridhar; Jürgen Behr; Hamed Sabzalipoor; Mark Somoza; Pieter Mestdagh; Jo Vandesompele
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MISEV and MIQE: integrating domain-specific and general standards to strengthen extracellular vesicle biomarker research
errEXTRACELLULAR VESICLES AND CIRCULATING NUCLEIC ACIDS
IF4.8
err2025-12-01
err1
PREAI
errPfaffl, Michael W.; Kubista, Mikael; Vandesompele, Jo; Bustin, Stephen A.
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errSave
Multiplexed Digital PCR Reference Gene Measurement for Genomic and Cell-Free DNA Analysis
errCells 2025, Vol. 14, Page 1544
IF5.2
err2025-10-03
err0
errOAAI
errDilek Yener; Eloise J. Busby; Jo Vandesompele; Gertjan Wils; Susan D. Richman; Henry M. Wood; Jim F. Huggett; Carole A. Foy; Alison S. Devonshire
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errSave
Author Correction: Sequential orthogonal assays for longitudinal and endpoint characterization of three-dimensional spheroids
errNature Protocols
IF16
err2025-06-09
err0
PREAI
errEva Blondeel; Sam Ernst; Felix De Vuyst; Ákos Diósdi; Cláudio Pinheiro; Diogo Estêvão; Pekka Rappu; Robin Boiy; Sándor Dedeyne; Ligia Craciun; Vera Goossens; Jonas Dehairs; Tânia Cruz; Dominique Audenaert; Wim Ceelen; Michael Linnebacher; Tom Boterberg; Jo Vandesompele; Pieter Mestdagh; Johan Swinnen; Jyrki Heino; Peter Horvath; Maria José Oliveira; An Hendrix; Pieter Demetter; Olivier De Wever
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errSave
MIQE 2.0: Revision of the Minimum Information for Publication of Quantitative Real-Time PCR Experiments Guidelines
errCLINICAL CHEMISTRY
IF6.3
err2025-04-24
err0
PREAI
errBustin, Stephen A.; Ruijter, Jan M.; van den Hoff, Maurice J. B.; Kubista, Mikael; Pfaffl, Michael W.; Shipley, Gregory L.; Tran, Nham; Roediger, Stefan; Untergasser, Andreas; Mueller, Reinhold; Nolan, Tania; Milavec, Mojca; Burns, Malcolm J.; Huggett, Jim F.; Vandesompele, Jo; Wittwer, Carl T.
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errSave
Sequential orthogonal assays for longitudinal and endpoint characterization of three-dimensional spheroids
errNATURE PROTOCOLS
IF16
err2025-04-08
err1
PREAI
errBlondeel, Eva; Ernst, Sam; De Vuyst, Felix; Diosdi, Akos; Pinheiro, Claudio; Estevao, Diogo; Rappu, Pekka; Boiy, Robin; Dedeyne, Sandor; Craciun, Ligia; Goossens, Vera; Dehairs, Jonas; Cruz, Tania; Audenaert, Dominique; Ceelen, Wim; Linnebacher, Michael; Boterberg, Tom; Vandesompele, Jo; Mestdagh, Pieter; Swinnen, Johan; Heino, Jyrki; Horvath, Peter; Hendrix, An; De Metter, Pieter; De Wever, Olivier
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errSave
Polytect: an automatic clustering and labeling method for multicolor digital PCR data
errgenomics proteomics bioinformatics
IF2.8
err2025-03-08
err0
errOAAI
errChen, Yao; De Spiegelaere, Ward; Trypsteen, Wim; Vandesompele, Jo; Wils, Gertjan; Gleerup, David; Lievens, Antoon; Thas, Olivier; Vynck, Matthijs
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errSave
Human skeletal muscle fiber heterogeneity beyond myosin heavy chains
errNATURE COMMUNICATIONS
IF15.7
err2025-02-19
err2
errOAAI
errRoger Moreno-Justicia; Thibaux Van der Stede; Ben Stocks; Jenni Laitila; Robert A. Seaborne; Alexia Van de Loock; Eline Lievens; Diana Samodova; Leyre Marín-Arraiza; Oksana Dmytriyeva; Robin Browaeys; Kim Van Vossel; Lukas Moesgaard; Nurten Yigit; Jasper Anckaert; Anneleen Weyns; Ruud Van Thienen; Ronni E. Sahl; Edmar Zanoteli; Michael W. Lawlor; Michael Wierer; Pieter Mestdagh; Jo Vandesompele; Julien Ochala; Morten Hostrup; Wim Derave; Atul S. Deshmukh
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errSave
Therapy response monitoring in blood plasma from esophageal adenocarcinoma patients using cell-free DNA methylation profiling
errSCIENTIFIC REPORTS
IF3.9
err2024-12-28
err0
errOAAI
errSchoofs, Kathleen; Ferro Dos Santos, Maisa R.; De Wilde, Jilke; Roelandt, Sofie; van de Velde, Sofie; Decruyenaere, Philippe; Meuris, Leander; Thas, Olivier; Philippron, Annouck; Depypere, Lieven; Nafteux, Philippe; Vanommeslaeghe, Hanne; Van Daele, Elke; Pattyn, Piet; Vandesompele, Jo; De Preter, Katleen
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errSave
Transcriptomic signatures of human single skeletal muscle fibers in response to high-intensity interval exercise
errAMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY
IF4.7
err2024-11-01
err2
PREAI
errVan der Stede, Thibaux; Van de Loock, Alexia; Lievens, Eline; Yigit, Nurten; Anckaert, Jasper; Van Thienen, Ruud; Weyns, Anneleen; Mestdagh, Pieter; Vandesompele, Jo; Derave, Wim
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errSave
Digital PCR threshold robustness analysis and optimization using dipcensR
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-10-14
err0
errOAAI
errVynck, Matthijs; Trypsteen, Wim; Thas, Olivier; Vandesompele, Jo; De Spiegelaere, Ward
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errSave
Subpar reporting of pre-analytical variables in RNA-focused blood plasma studies
errMOLECULAR ONCOLOGY
IF4.5
err2024-04-02
err2
errOAAI
errvan der Schueren, Celeste; Decruyenaere, Philippe; Cobos, Francisco Avila; Bult, Johanna; Deleu, Jill; Dipalo, Laudonia Lidia; Helsmoortel, Hetty Hilde; Hulstaert, Eva; Morlion, Annelien; Varas, Elena Ramos; Schoofs, Kathleen; Trypsteen, Wim; Eynde, Eveline Vanden; Van Droogenbroeck, Hanne; Verniers, Kimberly; Vandesompele, Jo; Decock, Anneleen
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errSave
Identification and validation of extracellular vesicle reference genes for the normalization of RT-qPCR data
errJOURNAL OF EXTRACELLULAR VESICLES
IF14.5
err2024-03-28
err2
errOAAI
errPinheiro, Claudio; Guilbert, Nike; Lippens, Lien; Roux, Quentin; Boiy, Robin; Fischer, Suzanne; Van Dorpe, Sofie; De Craene, Bram; Berx, Geert; Boterberg, Tom; Sys, Gwen; Denys, Hannelore; Miinalainen, Ilkka; Mestdagh, Pieter; Vandesompele, Jo; De Wever, Olivier; Hendrix, An
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errSave
Benchmarking digital PCR partition classification methods with empirical and simulated duplex data
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-03-28
err2
errOAAI
errChen, Yao; De Spiegelaere, Ward; Trypsteen, Wim; Gleerup, David; Vandesompele, Jo; Lievens, Antoon; Vynck, Matthijs; Thas, Olivier
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errSave
Exploiting tumor RNA-sequencing data for prediction of immune checkpoint inhibition response
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errMestdagh, Pieter; Van Dam, Pieter-Jan; De Baene, Frederick; Fierro, Carolina; Van Hoof, Elise; Riviere, Emmanuel; Dangreau, Hanne; Van Cauwenberge, Reindert; Vandesompele, Jo
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errSave
Proof-of-concept study to enumerate large oncosomes using the RareCyte CTC platform
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errPapp, Eszter; Vandesompele, Jo; Vermeulen, Peter B.; Dirix, Luc Y.; Kockx, Mark
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errSave
Nationwide quality assurance of high-throughput diagnostic molecular testing during the SARS-CoV-2 pandemic: role of the Belgian National Reference Centre
errVIROLOGY JOURNAL
IF3.8
err2024-02-10
err1
errOAAI
errJanssen, Reile; Cuypers, Lize; Laenen, Lies; Keyaerts, Els; Beuselinck, Kurt; Janssenswillen, Sunita; Slechten, Bram; Bode, Jannes; Wollants, Elke; Van Laethem, Kristel; Rector, Annabel; Bloemen, Mandy; Sijmons, Anke; de Schaetzen, Nathalie; Capron, Arnaud; Van Baelen, Kurt; Pascal, Thierry; Vermeiren, Celine; Bureau, Fabrice; Vandesompele, Jo; De Smet, Pieter; Uten, Wouter; Malonne, Hugues; Kerkhofs, Pierre; De Cock, Jo; Matheeussen, Veerle; Verhasselt, Bruno; Gillet, Laurent; Detry, Gautier; Bearzatto, Bertrand; Degosserie, Jonathan; Henin, Coralie; Pairoux, Gregor; Maes, Piet; Van Ranst, Marc; Lagrou, Katrien; Dequeker, Elisabeth; Andre, Emmanuel
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errSave
Exploring the cell-free total RNA transcriptome in diffuse large B-cell lymphoma and primary mediastinal B-cell lymphoma patients as biomarker source in blood plasma liquid biopsies
errFRONTIERS IN ONCOLOGY
IF3.3
err2023-10-25
err2
errOAAI
errDecruyenaere, Philippe; Giuili, Edoardo; Verniers, Kimberly; Anckaert, Jasper; De Grove, Katrien; Van der Linden, Malaika; Deeren, Dries; Van Dorpe, Jo; Offner, Fritz; Vandesompele, Jo
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errSave
Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision
errNATURE METHODS
IF32.1
err2023-07-13
err32
errOAAI
errVromman, Marieke; Anckaert, Jasper; Bortoluzzi, Stefania; Buratin, Alessia; Chen, Chia-Ying; Chu, Qinjie; Chuang, Trees-Juen; Dehghannasiri, Roozbeh; Dieterich, Christoph; Dong, Xin; Flicek, Paul; Gaffo, Enrico; Gu, Wanjun; He, Chunjiang; Hoffmann, Steve; Izuogu, Osagie; Jackson, Michael S.; Jakobi, Tobias; Lai, Eric C.; Nuytens, Justine; Salzman, Julia; Santibanez-Koref, Mauro; Stadler, Peter; Thas, Olivier; Eynde, Eveline Vanden; Verniers, Kimberly; Wen, Guoxia; Westholm, Jakub; Yang, Li; Ye, Chu-Yu; Yigit, Nurten; Yuan, Guo-Hua; Zhang, Jinyang; Zhao, Fangqing; Vandesompele, Jo; Volders, Pieter-Jan
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Research Directions

No research directions
Co-authors
Cooperation Journals
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H-index: 222 · Papers: 3.2K
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Robert A. Weinberg
H-index: 194 · Papers: 673
S
Stefan Schreiber
H-index: 192 · Papers: 1.9K
J
Jay Shendure
H-index: 167 · Papers: 662
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