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D

Danny Z. Chen

university of notre dame

49H-index
549Paper Count
9.7KCitation Count
Published Papers 80
Publication Date
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Efficient Approximation of Earth Mover’s Distance Based on Nearest Neighbor Search
errIEEE Transactions on Multimedia
IF9.7
err2026-01-01
err0
PREAI
errGuangyu Meng; Ruyu Zhou; Liu Liu; Peixian Liang; Fang Liu; Danny Z. Chen; Michael Niemier; Xiaobo Sharon Hu
errShare
errSave
Versatile and Risk-Sensitive Cardiac Diagnosis via Graph-Based ECG Signal Representation
errIEEE Transactions on Big Data
IF5.7
err2025-12-03
err0
PREAI
errYue Wang; Yuyang Xu; Renjun Hu; Fanqi Shen; Hanyun Jiang; Jun Wang; Jintai Chen; Danny Z. Chen; Jian Wu; Haochao Ying
errShare
errSave
Cell Instance Segmentation: The Devil Is in the Boundaries
errIEEE Transactions on Medical Imaging
IF9.8
err2025-10-14
err0
PREAI
errPeixian Liang; Yifan Ding; Yizhe Zhang; Jianxu Chen; Hao Zheng; Hongxiao Wang; Yejia Zhang; Guangyu Meng; Tim Weninger; Michael Niemier; X. Sharon Hu; Danny Z. Chen
errShare
errSave
DeepPhosPPI: a deep learning framework with attention-CNN and transformer for predicting phosphorylation effects on protein-protein interactions
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2025-09-01
err0
errOAAI
errGong, Yinyin; Li, Rui; Liu, Yan; Wang, Jilong; Chen, Danny Z.; Kwoh, Chee Keong
errShare
errSave
Universal conditional networks (UniCoN) for multi-age embryonic cartilage segmentation with sparsely annotated data (vol 15, 3893, 2025)
errSCIENTIFIC REPORTS
IF3.9
err2025-03-13
err0
errOAAI
errSapkota, Nishchal; Zhang, Yejia; Zhao, Zihao; Gomez, Maria Jose; Hsi, Yuhan; Wilson, Jordan A.; Kawasaki, Kazuhiko; Holmes, Greg; Wu, Meng; Jabs, Ethylin Wang; Richtsmeier, Joan T.; Perrine, Susan M. Motch; Chen, Danny Z.
errShare
errSave
Universal conditional networks (UniCoN) for multi-age embryonic cartilage segmentation with Sparsely annotated data
errSCIENTIFIC REPORTS
IF3.9
err2025-01-31
err0
errOAAI
errSapkota, Nishchal; Zhang, Yejia; Zhao, Zihao; Gomez, Maria Jose; Hsi, Yuhan; Wilson, Jordan A.; Kawasaki, Kazuhiko; Holmes, Greg; Wu, Meng; Jabs, Ethylin Wang; Richtsmeier, Joan T.; Perrine, Susan M. Motch; Chen, Danny Z.
errShare
errSave
A Protein-Context Enhanced Master Slave Framework for Zero-Shot Drug Target Interaction Prediction
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2024-11-01
err0
PREAI
errXu, Yuyang; Zhou, Jingbo; Ying, Haochao; Chen, Jintai; Chen, Wei; Chen, Danny Z.; Wu, Jian
errShare
errSave
Mapping cellular interactions from spatially resolved transcriptomics data
errNATURE METHODS
IF32.1
err2024-09-03
err2
PREAI
errZhu, James; Wang, Yunguan; Chang, Woo Yong; Malewska, Alicia; Napolitano, Fabiana; Gahan, Jeffrey C.; Unni, Nisha; Zhao, Min; Yuan, Rongqing; Wu, Fangjiang; Yue, Lauren; Guo, Lei; Zhao, Zhuo; Chen, Danny Z.; Hannan, Raquibul; Zhang, Siyuan; Xiao, Guanghua; Mu, Ping; Hanker, Ariella B.; Strand, Douglas; Arteaga, Carlos L.; Desai, Neil; Wang, Xinlei; Xie, Yang; Wang, Tao
errShare
errSave
Polygonal Approximation Learning for Convex Object Segmentation in Biomedical Images With Bounding Box Supervision
errIEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS
IF6.8
err2024-08-01
err1
PREAI
errZheng, Wenhao; Chen, Jintai; Zhang, Kai; Yan, Jiahuan; Wang, Jinhong; Cheng, Yi; Du, Bang; Chen, Danny Z.; Gao, Honghao; Wu, Jian; Xu, Hongxia
errShare
errSave
A Corresponding Region Fusion Framework for Multi-Modal Cervical Lesion Detection
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2024-07-01
err3
PREAI
errChen, Tingting; Zheng, Wenhao; Hu, Heping; Luo, Chunhua; Chen, Jintai; Yuan, Chunnv; Lu, Weiguo; Chen, Danny Z.; Gao, Honghao; Wu, Jian
errShare
errSave
Congenital heart disease detection by pediatric electrocardiogram based deep learning integrated with human concepts
errNATURE COMMUNICATIONS
IF15.7
err2024-02-01
err6
errOAAI
errChen, Jintai; Huang, Shuai; Zhang, Ying; Chang, Qing; Zhang, Yixiao; Li, Dantong; Qiu, Jia; Hu, Lianting; Peng, Xiaoting; Du, Yunmei; Gao, Yunfei; Chen, Danny Z.; Bellou, Abdelouahab; Wu, Jian; Liang, Huiying
errShare
errSave
TestFit: A plug-and-play one-pass test time method for medical image segmentation
errMEDICAL IMAGE ANALYSIS
IF11.8
err2024-02-01
err0
PREAI
errZhang, Yizhe; Zhou, Tao; Tao, Yuhui; Wang, Shuo; Wu, Ye; Liu, Benyuan; Gu, Pengfei; Chen, Qiang; Chen, Danny Z.
errShare
errSave
CCF-GNN: A Unified Model Aggregating Appearance, Microenvironment, and Topology for Pathology Image Classification
errIEEE TRANSACTIONS ON MEDICAL IMAGING
IF9.8
err2023-11-01
err7
PREAI
errWang, Hongxiao; Huang, Gang; Zhao, Zhuo; Cheng, Liang; Juncker-Jensen, Anna; Nagy, Mate Levente; Lu, Xin; Zhang, Xiangliang; Chen, Danny Z.
errShare
errSave
A CNN-LSTM Ensemble Model for Predicting Protein-Protein Interaction Binding Sites
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2023-11-01
err0
PREAI
errGong, Yinyin; Li, Rui; Fu, Bin; Liu, Yan; Wang, Jilong; Li, Renfa; Chen, Danny Z.
errShare
errSave
Learning from algorithm-generated pseudo-annotations for detecting ants in videos
errSCIENTIFIC REPORTS
IF3.9
err2023-07-18
err1
errOAAI
errZhang, Yizhe; Imirzian, Natalie; Kurze, Christoph; Zheng, Hao; Hughes, David P.; Chen, Danny Z.
errShare
errSave
Identifying Electrocardiogram Abnormalities Using a Handcrafted-Rule-Enhanced Neural Network
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2023-07-01
err3
errOAAI
errBian, Yuexin; Chen, Jintai; Chen, Xiaojun; Yang, Xiaoxian; Chen, Danny Z. Z.; Wu, Jian
errShare
errSave
A Robust Shape-Aware Rib Fracture Detection and Segmentation Framework With Contrastive Learning
errIEEE TRANSACTIONS ON MULTIMEDIA
IF9.7
err2023-01-01
err20
PREAI
errCao, Zheng; Xu, Liming; Chen, Danny Z.; Gao, Honghao; Wu, Jian
errShare
errSave
TANGO: A GO-Term Embedding Based Method for Protein Semantic Similarity Prediction
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2023-01-01
err3
PREAI
errWang, Hongxiao; Zheng, Hao; Chen, Danny Z.
errShare
errSave
A two-stage enhancement network with optimized effective receptive field for speckle image reconstruction
errMULTIMEDIA TOOLS AND APPLICATIONS
IF3
err2022-11-23
err1
PREAI
errXu, Linli; Liang, Peixian; Han, Jing; Bai, Lianfa; Chen, Danny Z.
errShare
errSave
KCB-Net: A 3D knee cartilage and bone segmentation network via sparse annotation
errMEDICAL IMAGE ANALYSIS
IF11.8
err2022-11-01
err8
errOAAI
errPeng, Yaopeng; Zheng, Hao; Liang, Peixian; Zhang, Lichun; Zaman, Fahim; Wu, Xiaodong; Sonka, Milan; Chen, Danny Z.
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
J
Jost B. Jonas
H-index: 175 · Papers: 1.9K
R
Richard N. Bergman
H-index: 143 · Papers: 923
C
Carlos L. Arteaga
H-index: 123 · Papers: 1.3K
E
Eric A. Hoffman
H-index: 114 · Papers: 1.4K
S
Srđan Verstovšek
H-index: 114 · Papers: 1.6K
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