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Varuni Sarwal

University of California System

8H-index
35Paper Count
675Citation Count
Published Papers 7
Publication Date
VISTA: an integrated framework for structural variant discovery
err2024-09-19
err0
errOAAI
errSarwal, Varuni; Lee, Seungmo; Yang, Jianzhi; Sankararaman, Sriram; Chaisson, Mark; Eskin, Eleazar; Mangul, Serghei
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Packaging and containerization of computational methods
err2024-04-02
err2
PREAI
errAlser, Mohammed; Lawlor, Brendan; Abdill, Richard J.; Waymost, Sharon; Ayyala, Ram; Rajkumar, Neha; LaPierre, Nathan; Brito, Jaqueline; Ribeiro-dos-Santos, Andre M.; Almadhoun, Nour; Sarwal, Varuni; Firtina, Can; Osinski, Tomasz; Eskin, Eleazar; Hu, Qiyang; Strong, Derek; Kim, Byoung-Do (B. D); Abedalthagafi, Malak S.; Mutlu, Onur; Mangul, Serghei
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INSIGHTS INTO THE GENETICS OF PERINATAL DEPRESSION VIA POLYGENIC SCORES
err2023-10-01
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PREAI
errPimplaskar, Aditya; Gelev, Kyla; Sarwal, Varuni; Chiang, Jeffrey; Loohuis, Loes Olde
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TAMPA: interpretable analysis and visualization of metagenomics-based taxon abundance profiles
err2023-02-28
err0
errOAAI
errSarwal, Varuni; Brito, Jaqueline; Mangul, Serghei; Koslicki, David
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A comprehensive benchmarking of WGS-based deletion structural variant callers
err2022-06-27
err13
errOAAI
errSarwal, Varuni; Niehus, Sebastian; Ayyala, Ram; Kim, Minyoung; Sarkar, Aditya; Chang, Sei; Lu, Angela; Rajkumar, Neha; Darfci-Maher, Nicholas; Littman, Russell; Chhugani, Karishma; Soylev, Arda; Comarova, Zoia; Wesel, Emily; Castellanos, Jacqueline; Chikka, Rahul; Distler, Margaret G.; Eskin, Eleazar; Flint, Jonathan; Mangul, Serghei
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Critical Assessment of Metagenome Interpretation: the second round of challenges
err2022-04-08
err136
errOAAI
errMeyer, Fernando; Fritz, Adrian; Deng, Zhi-Luo; Koslicki, David; Lesker, Till Robin; Gurevich, Alexey; Robertson, Gary; Alser, Mohammed; Antipov, Dmitry; Beghini, Francesco; Bertrand, Denis; Brito, Jaqueline J.; Brown, C. Titus; Buchmann, Jan; Buluc, Aydin; Chen, Bo; Chikhi, Rayan; Clausen, Philip T. L. C.; Cristian, Alexandru; Dabrowski, Piotr Wojciech; Darling, Aaron E.; Egan, Rob; Eskin, Eleazar; Georganas, Evangelos; Goltsman, Eugene; Gray, Melissa A.; Hansen, Lars Hestbjerg; Hofmeyr, Steven; Huang, Pingqin; Irber, Luiz; Jia, Huijue; Jorgensen, Tue Sparholt; Kieser, Silas D.; Klemetsen, Terje; Kola, Axel; Kolmogorov, Mikhail; Korobeynikov, Anton; Kwan, Jason; LaPierre, Nathan; Lemaitre, Claire; Li, Chenhao; Limasset, Antoine; Malcher-Miranda, Fabio; Mangul, Serghei; Marcelino, Vanessa R.; Marchet, Camille; Marijon, Pierre; Meleshko, Dmitry; Mende, Daniel R.; Milanese, Alessio; Nagarajan, Niranjan; Nissen, Jakob; Nurk, Sergey; Oliker, Leonid; Paoli, Lucas; Peterlongo, Pierre; Piro, Vitor C.; Porter, Jacob S.; Rasmussen, Simon; Rees, Evan R.; Reinert, Knut; Renard, Bernhard; Robertsen, Espen Mikal; Rosen, Gail L.; Ruscheweyh, Hans-Joachim; Sarwal, Varuni; Segata, Nicola; Seiler, Enrico; Shi, Lizhen; Sun, Fengzhu; Sunagawa, Shinichi; Sorensen, Soren Johannes; Thomas, Ashleigh; Tong, Chengxuan; Trajkovski, Mirko; Tremblay, Julien; Uritskiy, Gherman; Vicedomini, Riccardo; Wang, Zhengyang; Wang, Ziye; Wang, Zhong; Warren, Andrew; Willassen, Nils Peder; Yelick, Katherine; You, Ronghui; Zeller, Georg; Zhao, Zhengqiao; Zhu, Shanfeng; Zhu, Jie; Garrido-Oter, Ruben; Gastmeier, Petra; Hacquard, Stephane; Haeussler, Susanne; Khaledi, Ariane; Maechler, Friederike; Mesny, Fantin; Radutoiu, Simona; Schulze-Lefert, Paul; Smit, Nathiana; Strowig, Till; Bremges, Andreas; Sczyrba, Alexander; McHardy, Alice Carolyn
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Unlocking capacities of genomics for the COVID-19 response and future pandemics
err2022-04-08
err32
errOAAI
errKnyazev, Sergey; Chhugani, Karishma; Sarwal, Varuni; Ayyala, Ram; Singh, Harman; Karthikeyan, Smruthi; Deshpande, Dhrithi; Baykal, Pelin Icer; Comarova, Zoia; Lu, Angela; Porozov, Yuri; Vasylyeva, Tetyana, I; Wertheim, Joel O.; Tierney, Braden T.; Chiu, Charles Y.; Sun, Ren; Wu, Aiping; Abedalthagafi, Malak S.; Pak, Victoria M.; Nagaraj, Shivashankar H.; Smith, Adam L.; Skums, Pavel; Pasaniuc, Bogdan; Komissarov, Andrey; Mason, Christopher E.; Bortz, Eric; Lemey, Philippe; Kondrashov, Fyodor; Beerenwinkel, Niko; Lam, Tommy Tsan-Yuk; Wu, Nicholas C.; Zelikovsky, Alex; Knight, Rob; Crandall, Keith A.; Mangul, Serghei
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