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Molecular responses of chicken embryos to maternal heat stress through DNA methylation and gene expression: a pilot study Karami, Keyvan; Sabban, Jules; Cerutti, Chloe; Devailly, Guillaume; Foissac, Sylvain; Gourichon, David; Hubert, Alexandre; Hubert, Jean-Noel; Leroux, Sophie; Zerjal, Tatiana; Lagarrigue, Sandrine; Pitel, Frederique Share Save
Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues Degalez, Fabien; Charles, Mathieu; Foissac, Sylvain; Zhou, Haijuan; Guan, Dailu; Fang, Lingzhao; Klopp, Christophe; Allain, Coralie; Lagoutte, Laetitia; Lecerf, Frederic; Acloque, Herve; Giuffra, Elisabetta; Pitel, Frederique; Lagarrigue, Sandrine Share Save
Cell specification and functional interactions in the pig blastocyst inferred from single-cell transcriptomics and uterine fluids proteomics Dufour, Adrien; Kurylo, Cyril; Stoeckl, Jan B.; Laloe, Denis; Bailly, Yoann; Manceau, Patrick; Martins, Frederic; Turhan, Ali G.; Ferchaud, Stephane; Pain, Bertrand; Froehlich, Thomas; Foissac, Sylvain; Artus, Jerome; Acloque, Herve Share Save
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An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues (vol 10, 20457, 2020) Jehl, Frederic; Muret, Kevin; Bernard, Maria; Boutin, Morgane; Lagoutte, Laetitia; Desert, Colette; Dehais, Patrice; Esquerre, Diane; Acloque, Herve; Giuffra, Elisabetta; Djebali, Sarah; Foissac, Sylvain; Derrien, Thomas; Pitel, Frederique; Zerjal, Tatiana; Klopp, Christophe; Lagarrigue, Sandrine Share Save
An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues Jehl, Frederic; Muret, Kevin; Bernard, Maria; Boutin, Morgane; Lagoutte, Laetitia; Desert, Colette; Dehais, Patrice; Esquerre, Diane; Acloque, Herve; Giuffra, Elisabetta; Djebali, Sarah; Foissac, Sylvain; Derrien, Thomas; Pitel, Frederique; Zerjal, Tatiana; Klopp, Christophe; Lagarrigue, Sandrine Share Save
Functional Annotation of Animal Genomes (FAANG): Current Achievements and Roadmap Giuffra, Elisabetta; Tuggle, Christopher K.; Archibald, Alan L.; Acloque, Herve; Chamberlain, Amanda J.; Cochrane, Guy; Daetwyler, Hans D.; Djebali, Sarah; Eory, Lel; Foissac, Sylvain; Goddard, Michael E.; Groenen, Martien A. M.; Halstead, Michelle; Harrison, Peter W.; Hayes, Benjamin J.; Kern, Colin; Khatib, Hasan; Kuo, Richard I.; MacHugh, David E.; Macleod, Iona M.; Madsen, Ole; Reecy, James M.; Ross, Pablo J.; Watson, Mick; Wells, Jerry M.; Zhou, Huaijun Share Save
Long noncoding RNA repertoire in chicken liver and adipose tissue Muret, Kevin; Klopp, Christophe; Wucher, Valentin; Esquerre, Diane; Legeai, Fabrice; Lecerf, Frederic; Desert, Colette; Boutin, Morgane; Jehl, Frederic; Acloque, Herve; Giuffra, Elisabetta; Djebali, Sarah; Foissac, Sylvain; Derrien, Thomas; Lagarrigue, Sandrine Share Save
Modeling of autosomal-dominant retinitis pigmentosa in Caenorhabditis elegans uncovers a nexus between global impaired functioning of certain splicing factors and cell type-specific apoptosis Rubio-Pena, Karinna; Fontrodona, Laura; Aristizabal-Corrales, David; Torres, Silvia; Cornes, Eric; Garcia-Rodriguez, Francisco J.; Serrat, Xenia; Gonzalez-Knowles, David; Foissac, Sylvain; Porta-de-la-Riva, Montserrat; Ceron, Julian Share Save
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project Andersson, Leif; Archibald, Alan L.; Bottema, Cynthia D.; Brauning, Rudiger; Burgess, Shane C.; Burt, Dave W.; Casas, Eduardo; Cheng, Hans H.; Clarke, Laura; Couldrey, Christine; Dalrymple, Brian P.; Elsik, Christine G.; Foissac, Sylvain; Giuffra, Elisabetta; Groenen, Martien A.; Hayes, Ben J.; Huang, LuSheng S.; Khatib, Hassan; Kijas, James W.; Kim, Heebal; Lunney, Joan K.; McCarthy, Fiona M.; McEwan, John C.; Moore, Stephen; Nanduri, Bindu; Notredame, Cedric; Palti, Yniv; Plastow, Graham S.; Reecy, James M.; Rohrer, Gary A.; Sarropoulou, Elena; Schmidt, Carl J.; Silverstein, Jeffrey; Tellam, Ross L.; Tixier-Boichard, Michele; Tosser-Klopp, Gwenola; Tuggle, Christopher K.; Vilkki, Johanna; White, Stephen N.; Zhao, Shuhong; Zhou, Huaijun Share Save
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Efficient targeted transcript discovery via array-based normalization of RACE libraries Djebali, Sarah; Kapranov, Philipp; Foissac, Sylvain; Lagarde, Julien; Reymond, Alexandre; Ucla, Catherine; Wyss, Carine; Drenkow, Jorg; Dumais, Erica; Murray, Ryan R.; Lin, Chenwei; Szeto, David; Denoeud, France; Calvo, Miquel; Frankish, Adam; Harrow, Jennifer; Makrythanasis, Periklis; Vidal, Marc; Salehi-Ashtiani, Kourosh; Antonarakis, Stylianos E.; Gingeras, Thomas R.; Guigo, Roderic Share Save
Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions Denoeud, France; Kapranov, Philipp; Ucla, Catherine; Frankish, Adam; Castelo, Robert; Drenkow, Jorg; Lagarde, Julien; Alioto, Tyler; Manzano, Caroline; Chrast, Jacqueline; Dike, Sujit; Wyss, Carine; Henrichsen, Charlotte N.; Holroyd, Nancy; Dickson, Mark C.; Taylor, Ruth; Hance, Zahra; Foissac, Sylvain; Myers, Richard M.; Rogers, Jane; Hubbard, Tim; Harrow, Jennifer; Guigo, Roderic; Gingeras, Thomas R.; Antonarakis, Stylianos E.; Reymond, Alexandre Share Save
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