Yu Li - Publications, H-index & Citations

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Yu Li

The Chinese University of Hong Kong

49H-index

379Paper Count

7.8KCitation Count

Published Papers 93

Publication Date

RNA G-quadruplex structure recognition by chimeric peptides

Nucleic Acids Research

IF13.1

2026-07-30

OAAI

Xi Mou; Jiuming Wang; Yanruisheng Shao; Yu Li; Chun Kit Kwok

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Nucleotide flipping correlates with fluorescence activation in the RhoBAST imaging platform

Nature Communications

IF15.7

2026-07-21

OAAI

Xiaoqing Tai; Mengqi He; Christoph Mitteregger; Huiqin You; Zejia Hu; Peng Xiong; Xinyue Bao; Xin Shen; Hongcheng Li; Yu Li; Jinzhu Zhang; Ronald Micura; Aiming Ren

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Uncovering evolutionarily remote and highly potent antimicrobial peptides with protein language models

Nature Biomedical Engineering

IF26.6

2026-03-03

PREAI

Qinze Yu; Hongbin Liu; Haimei Shi; Yerzhan Abdrakhmanov; Junbo Shen; Chunhe Zhang; Zhihang Dong; Licheng Zong; Longlong Si; Lei Dai; Yu Li

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Shortwave signal modulation recognition method using adaptive time-Frequency threshold denoising and feature fusion

Physical Communication

IF2.2

2026-01-01

PREAI

Shen, Chen; Lyu, Tingting; Li, Yu; Lin, Tianqi; Liu, Yulong

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Exploring functional insights into the human gut microbiome via the structural proteome

Cell Host & Microbe

IF18.7

2025-11-26

PREAI

Hongbin Liu; Juntao Shen; Zhiwei Zhang; Jiuming Wang; Chengxin Zhang; Linggang Zheng; Haoran Ni; Liang Hong; Jieqiong Zhang; Dongfang Xue; Jiayang Chen; Qinze Yu; Zepeng Qu; Yingfei Ma; Tong Si; Liangzhen Zheng; Sheng Wang; Changtao Jiang; Yu Li; Kai Wang

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Neolithic genomes reveal long distance interactions in agropastoral border zone of Yan Mountain Region

Science Bulletin

IF21.1

2025-11-07

OAAI

Daxuan Zhang; Bing Sun; Fajun Li; Xue Zhao; Zhanhu Zhao; Jun Li; Shizhu Gao; Yu Li; Qiankun Quan; Natalia Berdnikova; Ivan Berdnikov; Shan Chen; Fan Zhang; Chunxiang Li; Choongwon Jeong; Yinqiu Cui

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Effects of Microwave Processing on the Conformational Characteristics of Konjac Glucomannan and Its Prebiotic Properties During In Vitro Fermentation

Food and Bioprocess Technology

IF5.8

2025-10-23

PREAI

Jie Huang; Yu Li; Jielun Hu; Huan Liu

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Toward large reasoning models: A survey of reinforced reasoning with large language models

Patterns

IF7.4

2025-10-10

OAAI

Fengli Xu; Qianyue Hao; Chenyang Shao; Zefang Zong; Yu Li; Jingwei Wang; Yunke Zhang; Jingyi Wang; Xiaochong Lan; Jiahui Gong; Tianjian Ouyang; Fanjin Meng; Yuwei Yan; Qinglong Yang; Yiwen Song; Sijian Ren; Xinyuan Hu; Jie Feng; Chen Gao; Yong Li

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BF2-Postmodified Cobalt–Porphyrin Covalent Organic Framework for High-Performance Specific Detection of NH3

ACS Sensors

IF9.1

2025-10-08

PREAI

Qi Liu; Binghan Hou; Qiang Li; Taotao Su; Yu Li; Yuexing Zhang; Youzhi Xu

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Predicting drug responses of unseen cell types through transfer learning with foundation models

Nature Computational Science

IF18.3

2025-10-03

PREAI

Yixuan Wang; Xinyuan Liu; Yimin Fan; Binghui Xie; James Cheng; Kam Chung Wong; Peter Cheung; Irwin King; Yu Li

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Structural analysis of ASCH domain-containing proteins and their implications for nucleotide processing

Structure

IF4.3

2025-09-11

PREAI

Chunyan Meng; Xiaoyan Shi; Wenting Guo; Xing Jian; Jie Zhao; Yan Wen; Ruiqi Wang; Yu Li; Sha Xu; Haitao Chen; Jiayu Zhang; Mingjia Chen; Hao Chen; Baixing Wu

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Constructing CRISPR-Cas9 system for metabolic reprogramming and cordycepin biomanufacturing in Pichia pastoris

Bioresource Technology

IF9

2025-07-10

PREAI

Bingjie Zhao; Jinlei Shi; Ruoyu Zhao; Shan Gao; Yu Li; Yong Zhang; Yuquan Wei; Yanbin Guo

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A two-stage scheduling algorithm based on pointer network with attention mechanism for micro-nano Earth observation satellite constellation

Chinese Journal of Aeronautics

IF5.7

2025-05-05

OAAI

Hai LI; Yuanhao LIU; Boyu DENG; Yongjun LI; Xin LI; Yu LI; Taijiang ZHANG; Shanghong ZHAO

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Deep learning for RNA structure prediction

CURRENT OPINION IN STRUCTURAL BIOLOGY

IF7

2025-04-01

OAAI

Wang, Jiuming; Fan, Yimin; Hong, Liang; Hu, Zhihang; Li, Yu

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Efficacy of dexamethasone combined with intravenous immunoglobulin for the treatment of pediatric autoimmune encephalitis

FRONTIERS IN NEUROLOGY

IF2.8

2025-03-12

OAAI

Zhou, Xiaolin; Luo, Xiangyang; He, Zhanwen; Tang, Danxia; Li, Yu; Li, Pinggan

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Linking dietary fiber to human malady through cumulative profiling of microbiota disturbance

IMETA

IF33.2

2025-02-19

OAAI

Zhang, Xin; Liu, Huan; Li, Yu; Wen, Yanlong; Xu, Tianxin; Chen, Chen; Hao, Shuxia; Hu, Jielun; Nie, Shaoping; Gao, Fei; Jia, Gengjie

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RETRACTION: [Retracted] NG25, an inhibitor of transforming growth factor-β-activated kinase 1, ameliorates neuronal apoptosis in neonatal hypoxic-ischemic rats

MOLECULAR MEDICINE REPORTS

IF3.5

2024-12-23

PREAI

Wang, Hua; Chen, Zhong; Li, Yu; Ji, Qiaoyun

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Accurate RNA 3D structure prediction using a language model-based deep learning approach

NATURE METHODS

IF32.1

2024-11-21

OAAI

Shen, Tao; Hu, Zhihang; Sun, Siqi; Liu, Di; Wong, Felix; Wang, Jiuming; Chen, Jiayang; Wang, Yixuan; Hong, Liang; Xiao, Jin; Zheng, Liangzhen; Krishnamoorthi, Tejas; King, Irwin; Wang, Sheng; Yin, Peng; Collins, James J.; Li, Yu

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Deep generative design of RNA aptamers using structural predictions

NATURE COMPUTATIONAL SCIENCE

IF18.3

2024-11-06

PREAI

Wong, Felix; He, Dongchen; Krishnan, Aarti; Hong, Liang; Wang, Alexander Z.; Wang, Jiuming; Hu, Zhihang; Omori, Satotaka; Li, Alicia; Rao, Jiahua; Yu, Qinze; Jin, Wengong; Zhang, Tianqing; Ilia, Katherine; Chen, Jack X.; Zheng, Shuangjia; King, Irwin; Li, Yu; Collins, James J.

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Progress and opportunities of foundation models in bioinformatics

BRIEFINGS IN BIOINFORMATICS

IF7.7

2024-10-26

OAAI

Li, Qing; Hu, Zhihang; Wang, Yixuan; Li, Lei; Fan, Yimin; King, Irwin; Jia, Gengjie; Wang, Sheng; Song, Le; Li, Yu

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Research Directions