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Alexander Crits‐Christoph

University of Tennessee Knoxville

34H-index
117Paper Count
7.1KCitation Count
Published Papers 27
Publication Date
Recently reported SARS-CoV-2 genomes suggested to be intermediate between the two early main lineages are instead likely derived
err2025-02-22
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errOAAI
errPekar, Jonathan E.; Moshiri, Niema; Lemey, Philippe; Crits-Christoph, Alexander; Debarre, Florence; Goldstein, Stephen A.; Hensel, Zach; Rambaut, Andrew; Worobey, Michael; Holmes, Edward C.; Wertheim, Joel O.
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No evidence that mutations in SARS-CoV-2 variants of concern derive from homologous fragments in gut microbiota
err2024-12-17
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PREAI
errParry, Rhys H.; Lytras, Spyros; Petrone, Mary E.; Wille, Michelle; Crits-Christoph, Alexander; Gifford, Robert J.; Saito, Akatsuki; Smura, Teemu; Peacock, Thomas P.
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Complete genomes of Asgard archaea reveal diverse integrated and mobile genetic elements
err2024-10-15
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errValentin-Alvarado, Luis E.; Shi, Ling-Dong; Appler, Kathryn E.; Crits-Christoph, Alexander; De Anda, Valerie; Adler, Benjamin A.; Cui, Michael L.; Ly, Lynn; Leao, Pedro; Roberts, Richard J.; Sachdeva, Rohan; Baker, Brett J.; Savage, David F.; Banfield, Jillian F.
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Asgard archaea modulate potential methanogenesis substrates in wetland soil
err2024-07-31
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errValentin-Alvarado, Luis E.; Appler, Kathryn E.; De Anda, Valerie; Schoelmerich, Marie C.; West-Roberts, Jacob; Kivenson, Veronika; Crits-Christoph, Alexander; Ly, Lynn; Sachdeva, Rohan; Greening, Chris; Savage, David F.; Baker, Brett J.; Banfield, Jillian F.
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A widely distributed genus of soil Acidobacteria genomically enriched in biosynthetic gene clusters
err2022-08-13
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errCrits-Christoph, Alexander; Diamond, Spencer; Al-Shayeb, Basem; Valentin-Alvarado, Luis; Banfield, Jillian F.
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Good microbes, bad genes? The dissemination of antimicrobial resistance in the human microbiome
err2022-03-25
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errOAAI
errCrits-Christoph, Alexander; Hallowell, Haley Anne; Koutouvalis, Kalia; Suez, Jotham
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Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)
err2022-01-05
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errDiamond, Spencer; Lavy, Adi; Crits-Christoph, Alexander; Carnevali, Paula B. Matheus; Sharrar, Allison; Williams, Kenneth H.; Banfield, Jillian F.
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Priority effects in microbiome assembly (Aug, 10.1038/s41579-021-00604-w, 2021)
err2021-10-01
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errOAAI
errDebray, Reena; Herbert, Robin A.; Jaffe, Alexander L.; Crits-Christoph, Alexander; Power, Mary E.; Koskella, Britt
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Infant gut strain persistence is associated with maternal origin, phylogeny, and traits including surface adhesion and iron acquisition
err2021-09-01
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errLou, Yue Clare; Olm, Matthew R.; Diamond, Spencer; Crits-Christoph, Alexander; Firek, Brian A.; Baker, Robyn; Morowitz, Michael J.; Banfield, Jillian F.
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Priority effects in microbiome assembly
err2021-08-27
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PREAI
errDebray, Reena; Herbert, Robin A.; Jaffe, Alexander L.; Crits-Christoph, Alexander; Power, Mary E.; Koskella, Britt
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Tools for interpretation of wastewater SARS-CoV-2 temporal and spatial trends demonstrated with data collected in the San Francisco Bay Area
err2021-08-01
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errOAAI
errGreenwald, Hannah D.; Kennedy, Lauren C.; Hinkle, Adrian; Whitney, Oscar N.; Fan, Vinson B.; Crits-Christoph, Alexander; Harris-Lovett, Sasha; Flamholz, Avi, I; Al-Shayeb, Basem; Liao, Lauren D.; Beyers, Matt; Brown, Daniel; Chakrabarti, Alicia R.; Dow, Jason; Frost, Dan; Koekemoer, Mark; Lynch, Chris; Sarkar, Payal; White, Eileen; Kantor, Rose; Nelson, Kara L.
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
err2021-05-22
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errCarnevali, Paula B. Matheus; Lavy, Adi; Thomas, Alex D.; Crits-Christoph, Alexander; Diamond, Spencer; Meheust, Raphael; Olm, Matthew R.; Sharrar, Allison; Lei, Shufei; Dong, Wenming; Falco, Nicola; Bouskill, Nicholas; Newcomer, Michelle E.; Nico, Peter; Wainwright, Haruko; Dwivedi, Dipankar; Williams, Kenneth H.; Hubbard, Susan; Banfield, Jillian F.
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Sewage, Salt, Silica, and SARS-CoV-2 (4S): An Economical Kit-Free Method for Direct Capture of SARS-CoV-2 RNA from Wastewater
err2021-03-24
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errWhitney, Oscar N.; Kennedy, Lauren C.; Fan, Vinson; Hinkle, Adrian; Kantor, Rose; Greenwald, Hannah; Crits-Christoph, Alexander; Al-Shayeb, Basem; Chaplin, Mira; Maurer, Anna C.; Tjian, Robert; Nelson, Kara L.
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Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants
errMBIO
IF4.7
err2021-02-23
err244
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errCrits-Christoph, Alexander; Kantor, Rose S.; Olm, Matthew R.; Whitney, Oscar N.; Al-Shayeb, Basem; Lou, Yue Clare; Flamholz, Avi; Kennedy, Lauren C.; Greenwald, Hannah; Hinkle, Adrian; Hetzel, Jonathan; Spitzer, Sara; Koble, Jeffery; Tan, Asako; Hyde, Fred; Schroth, Gary; Kuersten, Scott; Banfield, Jillian F.; Nelson, Kara L.
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inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains
err2021-01-18
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errOlm, Matthew R.; Crits-Christoph, Alexander; Bouma-Gregson, Keith; Firek, Brian A.; Morowitz, Michael J.; Banfield, Jillian F.
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Transporter genes in biosynthetic gene clusters predict metabolite characteristics and siderophore activity
err2020-12-23
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errCrits-Christoph, Alexander; Bhattacharya, Nicholas; Olm, Matthew R.; Song, Yun S.; Banfield, Jillian F.
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Bacterial Secondary Metabolite Biosynthetic Potential in Soil Varies with Phylum, Depth, and Vegetation Type
errMBIO
IF4.7
err2020-06-30
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errSharrar, Allison M.; Crits-Christoph, Alexander; Meheust, Raphael; Diamond, Spencer; Starr, Evan P.; Banfield, Jillian F.
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Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow
err2020-04-23
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errCrits-Christoph, Alexander; Olm, Matthew R.; Diamond, Spencer; Bouma-Gregson, Keith; Banfield, Jillian F.
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Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease
err2020-03-23
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errRyan, F. J.; Ahern, A. M.; Fitzgerald, R. S.; Laserna-Mendieta, E. J.; Power, E. M.; Clooney, A. G.; O'Donoghue, K. W.; McMurdie, P. J.; Iwai, S.; Crits-Christoph, A.; Sheehan, D.; Moran, C.; Flemer, B.; Zomer, A. L.; Fanning, A.; O'Callaghan, J.; Walton, J.; Temko, A.; Stack, W.; Jackson, L.; Joyce, S. A.; Melgar, S.; DeSantis, T. Z.; Bell, J. T.; Shanahan, F.; Claesson, M. J.
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Consistent Metagenome-Derived Metrics Verify and Delineate Bacterial Species Boundaries
err2020-02-11
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errOAAI
errOlm, Matthew R.; Crits-Christoph, Alexander; Diamond, Spencer; Lavy, Adi; Carnevali, Paula B. Matheus; Banfield, Jillian F.
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