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Paul R. Jensen

university of california san diego

93H-index
462Paper Count
3.1WCitation Count
Published Papers 177
Publication Date
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Direct Capture Methods Reveal Extensive Organohalide Chemical Space in Marine Environments
errMarine Drugs
IF5.4
err2026-07-28
err0
errOAAI
errAlexander Bogdanov; Douglas Sweeney; Melissa L. Carter; Kayla Martin; Elena Beckhaus; Paul R. Jensen
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IDBac: an open-access web platform to identify bacteria and analyze relationships in culture collections using MALDI-TOF mass spectrometry
errNature Communications
IF15.7
err2026-07-23
err0
errOAAI
errNyssa K. Krull; Michael Strobel; Julia Saulog; Liana Zaroubi; Bruno S. Paulo; Mandisa Timba; Douglas R. Braun; Gabrielle Mingolelli; Jessia Raherisoanjato; Robert A. Shepherd; Abigail F. Scott; Carlo De Silva; Claire Fergusson; Zachary Daniel; Shailaja K. Pokharel; Sean Romanowski; Antonio Hernandez; Mónica Monge-Loría; Claire E. Dylla; Manasi M. Natu; Valentina Z. Petukhova; Chase M. Clark; Neha Garg; Paul R. Jensen; Adriana Blachowicz; Chelsi D. Cassilly; Lisa Guan; D. Cole Stevens; Jaclyn M. Winter; Shaun M. K. McKinnie; Barbara I. Adaikpoh; Skylar Carlson; Erin P. McCauley; William W. Metcalf; Tim S. Bugni; Michael W. Mullowney; Eric G. Pamer; Matthew T. Henke; Hazel Barton; David O. Carter; Alessandra S. Eustáquio; Roger G. Linington; Laura M. Sanchez; Mingxun Wang; Brian T. Murphy
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errSave
Taxonomic and biosynthetic diversity of the marine actinomycete Salinispora across spatial scales
errAPPLIED AND ENVIRONMENTAL MICROBIOLOGY
IF3.7
err2025-12-01
err0
PREAI
errCreamer, Kaitlin E.; Castro-Falcon, Gabriel; Ince, Ebru; Vasilat, Victoria; Gorbitz, David Vereau; Demko, Alyssa M.; Jensen, Paul R.
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errSave
Extremophile hotspots linked to containerized industrial waste dumping in a deep-sea basin
errPNAS NEXUS
IF3.8
err2025-09-01
err0
PREAI
errGutleben, Johanna; Podell, Sheila; Mizell, Kira; Sweeney, Douglas; Neira, Carlos; Levin, Lisa A.; Jensen, Paul R.
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errSave
Soil microbiome interventions for carbon sequestration and climate mitigation
errMSYSTEMS
IF4.6
err2025-01-21
err0
errOAAI
errBeattie, Gwyn A.; Edlund, Anna; Esiobu, Nwadiuto; Gilbert, Jack; Nicolaisen, Mette Haubjerg; Jansson, Janet K.; Jensen, Paul; Keiluweit, Marco; Lennon, Jay T.; Martiny, Jennifer; Minnis, Vanessa R.; Newman, Dianne; Peixoto, Raquel; Schadt, Christopher; van der Meer, Jan Roelof
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Pattern-Based Genome Mining Guides Discovery of the Antibiotic Indanopyrrole A from a Marine Streptomycete
errJOURNAL OF NATURAL PRODUCTS
IF3.6
err2024-11-22
err2
errOAAI
errSweeney, Douglas; Bogdanov, Alexander; Chase, Alexander B.; Castro-Falcon, Gabriel; Trinidad-Javier, Alma; Dahesh, Samira; Nizet, Victor; Jensen, Paul R.
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errSave
Small molecule in situ resin capture provides a compound first approach to natural product discovery
errNATURE COMMUNICATIONS
IF15.7
err2024-06-19
err1
errOAAI
errBogdanov, Alexander; Salib, Mariam N.; Chase, Alexander B.; Hammerlindl, Heinz; Muskat, Mitchell N.; Luedtke, Stephanie; da Silva, Elany Barbosa; O'Donoghue, Anthony J.; Wu, Lani F.; Altschuler, Steven J.; Molinski, Tadeusz F.; Jensen, Paul R.
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Identification of DDT plus in Deep Ocean Sediment and Biota in the Southern California Bight
errENVIRONMENTAL SCIENCE & TECHNOLOGY LETTERS
IF8.8
err2024-05-06
err2
errOAAI
errStack, Margaret E.; Richardot, William H.; Garcia, Raymmah; Nguyen, Tran; Choy, C. Anela; Jensen, Paul R.; Gutleben, Johanna; Dodder, Nathan G.; Aluwihare, Lihini I.; Hoh, Eunha
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errSave
MAR4 Streptomyces: A Unique Resource for Natural Product Discovery
errJOURNAL OF NATURAL PRODUCTS
IF3.6
err2024-02-14
err5
errOAAI
errSweeney, Douglas; Chase, Alexander B.; Bogdanov, Alexander; Jensen, Paul R.
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errSave
Metagenomic data reveals type I polyketide synthase distributions across biomes
errMSYSTEMS
IF4.6
err2023-06-29
err5
errOAAI
errSingh, Hans W.; Creamer, Kaitlin E.; Chase, Alexander B.; Klau, Leesa J.; Podell, Sheila; Jensen, Paul R.
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errSave
Biogeographic patterns of biosynthetic potential and specialized metabolites in marine sediments
errISME JOURNAL
IF10
err2023-04-15
err11
errOAAI
errChase, Alexander B.; Bogdanov, Alexander; Demko, Alyssa M.; Jensen, Paul R.
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errSave
The Natural Product Domain Seeker version 2 (NaPDoS2) webtool relates ketosynthase phylogeny to biosynthetic function
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2022-10-01
err42
errOAAI
errKlau, Leesa J.; Podell, Sheila; Creamer, Kaitlin E.; Demko, Alyssa M.; Singh, Hans W.; Allen, Eric E.; Moore, Bradley S.; Ziemert, Nadine; Letzel, Anne Catrin; Jensen, Paul R.
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errSave
Antibiotic Activity Altered by Competitive Interactions Between Two Coral Reef-Associated Bacteria
errMICROBIAL ECOLOGY
IF4
err2022-04-23
err1
errOAAI
errMascuch, Samantha J.; Demko, Alyssa; Viulu, Samson; Ginigini, Joape; Soapi, Katy; Jensen, Paul; Kubanek, Julia
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errSave
Specialized Metabolite-Mediated Predation Defense in the Marine Actinobacterium Salinispora
errAPPLIED AND ENVIRONMENTAL MICROBIOLOGY
IF3.7
err2022-01-11
err3
errOAAI
errTuttle, Robert N.; Rouse, Greg W.; Castro-Falcon, Gabriel; Hughes, Chambers C.; Jensen, Paul R.
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errSave
Vertical Inheritance Facilitates Interspecies Diversification in Biosynthetic Gene Clusters and Specialized Metabolites
errMBIO
IF4.7
err2021-12-21
err33
errOAAI
errChase, Alexander B.; Sweeney, Douglas; Muskat, Mitchell N.; Guillen-Matus, Dulce G.; Jensen, Paul R.
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errSave
Microbial diversity in tropical marine sediments assessed using culture-dependent and culture-independent techniques
errENVIRONMENTAL MICROBIOLOGY
IF4
err2021-10-11
err13
errOAAI
errDemko, Alyssa M.; Patin, Nastassia V.; Jensen, Paul R.
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errSave
Grincamycins P-T: Rearranged Angucyclines from the Marine Sediment-Derived Streptomyces sp. CNZ-748 Inhibit Cell Lines of the Rare Cancer Pseudomyxoma Peritonei
errJOURNAL OF NATURAL PRODUCTS
IF3.6
err2021-04-26
err11
errOAAI
errShang, Zhuo; Ferris, Zachary E.; Sweeney, Douglas; Chase, Alexander B.; Yuan, Chunhua; Hui, Yvonne; Hou, Lukuan; Older, Ethan A.; Xue, Dan; Tang, Xiaoyu; Zhang, Weipeng; Nagarkatti, Prakash; Nagarkatti, Mitzi; Testerman, Traci L.; Jensen, Paul R.; Li, Jie
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errSave
A community resource for paired genomic and metabolomic data mining
errNATURE CHEMICAL BIOLOGY
IF13.7
err2021-02-15
err90
errOAAI
errSchorn, Michelle A.; Verhoeven, Stefan; Ridder, Lars; Huber, Florian; Acharya, Deepa D.; Aksenov, Alexander A.; Aleti, Gajender; Moghaddam, Jamshid Amiri; Aron, Allegra T.; Aziz, Saefuddin; Bauermeister, Anelize; Bauman, Katherine D.; Baunach, Martin; Beemelmanns, Christine; Beman, J. Michael; Berlanga-Clavero, Maria Victoria; Blacutt, Alex A.; Bode, Helge B.; Boullie, Anne; Brejnrod, Asker; Bugni, Tim S.; Calteau, Alexandra; Cao, Liu; Carrion, Victor J.; Castelo-Branco, Raquel; Chanana, Shaurya; Chase, Alexander B.; Chevrette, Marc G.; Costa-Lotufo, Leticia V.; Crawford, Jason M.; Currie, Cameron R.; Cuypers, Bart; Dang, Tam; de Rond, Tristan; Demko, Alyssa M.; Dittmann, Elke; Du, Chao; Drozd, Christopher; Dujardin, Jean-Claude; Dutton, Rachel J.; Edlund, Anna; Fewer, David P.; Garg, Neha; Gauglitz, Julia M.; Gentry, Emily C.; Gerwick, Lena; Glukhov, Evgenia; Gross, Harald; Gugger, Muriel; Guillen Matus, Dulce G.; Helfrich, Eric J. N.; Hempel, Benjamin-Florian; Hur, Jae-Seoun; Iorio, Marianna; Jensen, Paul R.; Kang, Kyo Bin; Kaysser, Leonard; Kelleher, Neil L.; Kim, Chung Sub; Kim, Ki Hyun; Koester, Irina; Koenig, Gabriele M.; Leao, Tiago; Lee, Seoung Rak; Lee, Yi-Yuan; Li, Xuanji; Little, Jessica C.; Maloney, Katherine N.; Maennle, Daniel; Martin H., Christian; McAvoy, Andrew C.; Metcalf, Willam W.; Mohimani, Hosein; Molina-Santiago, Carlos; Moore, Bradley S.; Mullowney, Michael W.; Muskat, Mitchell; Nothias, Louis-Felix; O'Neill, Ellis C.; Parkinson, Elizabeth I.; Petras, Daniel; Piel, Jorn; Pierce, Emily C.; Pires, Karine; Reher, Raphael; Romero, Diego; Roper, M. Caroline; Rust, Michael; Saad, Hamada; Saenz, Carmen; Sanchez, Laura M.; Sorensen, Soren Johannes; Sosio, Margherita; Sussmuth, Roderich D.; Sweeney, Douglas; Tahlan, Kapil; Thomson, Regan J.; Tobias, Nicholas J.; Trindade-Silva, Amaro E.; van Wezel, Gilles P.; Wang, Mingxun; Weldon, Kelly C.; Zhang, Fan; Ziemert, Nadine; Duncan, Katherine R.; Cruesemann, Max; Rogers, Simon; Dorrestein, Pieter C.; Medema, Marnix H.; van der Hooft, Justin J. J.
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Expansion of Gamma-Butyrolactone Signaling Molecule Biosynthesis to Phosphotriester Natural Products
errACS CHEMICAL BIOLOGY
IF3.8
err2020-11-24
err9
errOAAI
errKudo, Yuta; Awakawa, Takayoshi; Du, Yi-Ling; Jordan, Peter A.; Creamer, Kaitlin E.; Jensen, Paul R.; Linington, Roger G.; Ryan, Katherine S.; Moore, Bradley S.
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errSave
Verrucosamide, a Cytotoxic 1,4-Thiazepane-Containing Thiodepsipeptide from a Marine-Derived Actinomycete
errMARINE DRUGS
IF5.4
err2020-11-05
err10
errOAAI
errNair, Vimal; Kim, Min Cheol; Golen, James A.; Rheingold, Arnold L.; Castro, Gabriel A.; Jensen, Paul R.; Fenical, William
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Research Directions

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Co-authors
Cooperation Journals
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Rob Knight
H-index: 255 · Papers: 1.8K
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Bernhard Ø. Palsson
H-index: 166 · Papers: 1.2K
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Ralph S. Baric
H-index: 147 · Papers: 1.1K
J
Jon Clardy
H-index: 137 · Papers: 1.4K
V
Victor Nizet
H-index: 123 · Papers: 871
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