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Maternal balanced energy-protein supplementation reshapes the maternal gut microbiome and enhances carbohydrate metabolism in infants: a randomized controlled trial Deng, Lishi; Taelman, Steff; Olm, Matthew R.; Toe, Laeticia Celine; Balini, Eva; Ouedraogo, Lionel Olivier; Bastos-Moreira, Yuri; Argaw, Alemayehu; Tesfamariam, Kokeb; Sonnenburg, Erica D.; Hanley-Cook, Giles T.; Ouedraogo, Moctar; Ganaba, Rasmane; Van Criekinge, Wim; Huybregts, Lieven; Stock, Michiel; Kolsteren, Patrick; Sonnenburg, Justin L.; Lachat, Carl; Dailey-Chwalibog, Trenton Share Save
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Reporting guidelines for human microbiome research: the STORMS checklist Mirzayi, Chloe; Renson, Audrey; Zohra, Fatima; Elsafoury, Shaimaa; Geistlinger, Ludwig; Kasselman, Lora J.; Eckenrode, Kelly; van de Wijgert, Janneke; Loughman, Amy; Marques, Francine Z.; MacIntyre, David A.; Arumugam, Manimozhiyan; Azhar, Rimsha; Beghini, Francesco; Bergstrom, Kirk; Bhatt, Ami; Bisanz, Jordan E.; Braun, Jonathan; Bravo, Hector Corrada; Buck, Gregory A.; Bushman, Frederic; Casero, David; Clarke, Gerard; Carmen Collado, Maria; Cotter, Paul D.; Cryan, John F.; Demmer, Ryan T.; Devkota, Suzanne; Elinav, Eran; Escobar, Juan S.; Fettweis, Jennifer; Finn, Robert D.; Fodor, Anthony A.; Forslund, Sofia; Franke, Andre; Furlanello, Cesare; Gilbert, Jack; Grice, Elizabeth; Haibe-Kains, Benjamin; Handley, Scott; Herd, Pamela; Holmes, Susan; Jacobs, Jonathan P.; Karstens, Lisa; Knight, Rob; Knights, Dan; Koren, Omry; Kwon, Douglas S.; Langille, Morgan; Lindsay, Brianna; McGovern, Dermot; McHardy, Alice C.; McWeeney, Shannon; Mueller, Noel T.; Nezi, Luigi; Olm, Matthew; Palm, Noah; Pasolli, Edoardo; Raes, Jeroen; Redinbo, Matthew R.; Ruhlemann, Malte; Sartor, R. Balfour; Schloss, Patrick D.; Schriml, Lynn; Segal, Eran; Shardell, Michelle; Sharpton, Thomas; Smirnova, Ekaterina; Sokol, Harry; Sonnenburg, Justin L.; Srinivasan, Sujatha; Thingholm, Louise B.; Turnbaugh, Peter J.; Upadhyay, Vaibhav; Walls, Ramona L.; Wilmes, Paul; Yamada, Takuji; Zeller, Georg; Zhang, Mingyu; Zhao, Ni; Zhao, Liping; Bao, Wenjun; Culhane, Aedin; Devanarayan, Viswanath; Dopazo, Joaquin; Fan, Xiaohui; Fischer, Matthias; Jones, Wendell; Kusko, Rebecca; Mason, Christopher E.; Mercer, Tim R.; Sansone, Susanna-Assunta; Scherer, Andreas; Shi, Leming; Thakkar, Shraddha; Tong, Weida; Wolfinger, Russ; Hunter, Christopher; Segata, Nicola; Huttenhower, Curtis; Dowd, Jennifer B.; Jones, Heidi E.; Waldron, Levi Share Save
Infant gut strain persistence is associated with maternal origin, phylogeny, and traits including surface adhesion and iron acquisition Lou, Yue Clare; Olm, Matthew R.; Diamond, Spencer; Crits-Christoph, Alexander; Firek, Brian A.; Baker, Robyn; Morowitz, Michael J.; Banfield, Jillian F. Share Save
Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics West, Patrick T.; Peters, Samantha L.; Olm, Matthew R.; Yu, Feiqiao B.; Gause, Haley; Lou, Yue Clare; Firek, Brian A.; Baker, Robyn; Johnson, Alexander D.; Morowitz, Michael J.; Hettich, Robert L.; Banfield, Jillian F. Share Save
Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale Carnevali, Paula B. Matheus; Lavy, Adi; Thomas, Alex D.; Crits-Christoph, Alexander; Diamond, Spencer; Meheust, Raphael; Olm, Matthew R.; Sharrar, Allison; Lei, Shufei; Dong, Wenming; Falco, Nicola; Bouskill, Nicholas; Newcomer, Michelle E.; Nico, Peter; Wainwright, Haruko; Dwivedi, Dipankar; Williams, Kenneth H.; Hubbard, Susan; Banfield, Jillian F. Share Save
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Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants Crits-Christoph, Alexander; Kantor, Rose S.; Olm, Matthew R.; Whitney, Oscar N.; Al-Shayeb, Basem; Lou, Yue Clare; Flamholz, Avi; Kennedy, Lauren C.; Greenwald, Hannah; Hinkle, Adrian; Hetzel, Jonathan; Spitzer, Sara; Koble, Jeffery; Tan, Asako; Hyde, Fred; Schroth, Gary; Kuersten, Scott; Banfield, Jillian F.; Nelson, Kara L. Share Save
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Necrotizing enterocolitis is preceded by increased gut bacterial replication, Klebsiella, and fimbriae-encoding bacteria Olm, Matthew R.; Bhattacharya, Nicholas; Crits-Christoph, Alexander; Firek, Brian A.; Baker, Robyn; Song, Yun S.; Morowitz, Michael J.; Banfield, Jillian F. Share Save
Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria (vol 10, 463, 2019) Carnevali, Paula B. Matheus; Schulz, Frederik; Castelle, Cindy J.; Kantor, Rose S.; Shih, Patrick M.; Sharon, Itai; Santini, Joanne M.; Olm, Matthew R.; Amano, Yuki; Thomas, Brian C.; Anantharaman, Karthik; Burstein, David; Becraft, Eric D.; Stepanauskas, Ramunas; Woyke, Tanja; Banfield, Jillian F. Share Save
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