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Tanja Woyke

lawrence berkeley national laboratory

104H-index
841Paper Count
5.1WCitation Count
Published Papers 193
Publication Date
Genomic catalogue of giant viruses reveals expanded diversity and functional potential
err2026-08-13
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errYumary M. Vasquez; Tiago Nardi; Gbocho Masato Terasaki; Petra Byl; Tomáš Brůna; Juan C. Villada; Miguel F. Romero-Gutiérrez; Thomas Mock; Timothy Y. James; Tanja Woyke; Frederik Schulz
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Vicennial metagenomic time series unveils evolutionary dynamics of giant viruses in a freshwater ecosystem
err2026-06-05
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errYumary M. Vasquez; Miguel F. Romero; Robert M. Bowers; Robin R. Rohwer; Katherine D. McMahon; Tanja Woyke; Frederik Schulz
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Aerobic sister lineage of breviates has gene-rich mitochondrial genomes
err2026-03-13
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PREAI
errAnna Cho; John A. Burns; Tanja Woyke; Ramunas Stepanauskas; Nicole Poulton; Jeremy G. Wideman
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Single-cell genomics reveals complex microbial and viral associations in ciliates and testate amoebae
err2025-11-24
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errFrederik Schulz; Ying Yan; Agnes K. M. Weiner; Ragib Ahsan; Laura A. Katz; Tanja Woyke
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Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome
err2025-10-31
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errRobert M. Bowers; Shayna Bennett; Robert Riley; Juan C. Villada; Iolanda Ramalho Da Silva; Tanja Woyke; A. Carolin Frank
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A genomic view of Earth’s biomes
err2025-09-15
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PREAI
errGitta Szabó; Emiley A. Eloe-Fadrosh; Jennifer Pett-Ridge; Tanja Woyke
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Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
err2025-07-29
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PREAI
errMarike Palmer; Nancy O. Nou; Lara A. Turello; Carolyn E. Power; John C. Ong; Jonathan K. Covington; Dengxun Lai; Xavier Mayali; Anna-Louise Reysenbach; Yan-Ling Qi; Jeremy A. Dodsworth; Jian-Yu Jiao; Lan Liu; Zheng-Han Lian; Meng-Meng Li; Yitai Liu; Ranjani Murali; Brandon R. Briggs; Hongyan Zuo; Stephen R. Quake; Emiley A. Eloe-Fadrosh; Tanja Woyke; Peter K. Weber; Hailiang Dong; Wen-Jun Li; Zheng-Shuang Hua; Brian P. Hedlund
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Proposal of Patescibacterium danicum gen. nov., sp. nov. in the ubiquitous bacterial phylum Patescibacteriota phyl. nov.
err2024-11-19
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errDutkiewicz, Zuzanna; Singleton, Caitlin M.; Sereika, Mantas; Villada, Juan C.; Mussig, Aaron J.; Chuvochina, Maria; Albertsen, Mads; Schulz, Frederik; Woyke, Tanja; Nielsen, Per H.; Hugenholtz, Philip; Rinke, Christian
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Genomes OnLine Database (GOLD) v.10: new features and updates
err2024-11-05
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errMukherjee, Supratim; Stamatis, Dimitri; Li, Cindy Tianqing; Ovchinnikova, Galina; Kandimalla, Mahathi; Handke, Van; Reddy, Anuha; Ivanova, Natalia; Woyke, Tanja; Eloe-Fardosh, Emiley A.; Chen, I-Min A.; Kyrpides, Nikos C.; Reddy, T. B. K.
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Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota
err2024-11-04
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errNou, Nancy O.; Covington, Jonathan K.; Lai, Dengxun; Mayali, Xavier; Seymour, Cale O.; Johnston, Juliet; Jiao, Jian-Yu; Buessecker, Steffen; Mosier, Damon; Muok, Alise R.; Torosian, Nicole; Cook, Allison M.; Briegel, Ariane; Woyke, Tanja; Eloe-Fadrosh, Emiley; Shapiro, Nicole; Bryan, Scott G.; Sleezer, Savannah; Dimapilis, Joshua; Gonzalez, Cristina; Gonzalez, Lizett; Noriega, Marlene; Hess, Matthias; Carlson, Ross P.; Liu, Lan; Li, Meng-Meng; Lian, Zheng-Han; Zhu, Siqi; Liu, Fan; Sun, Xian; Gao, Beile; Mewalal, Ritesh; Harmon-Smith, Miranda; Blaby, Ian K.; Cheng, Jan-Fang; Weber, Peter K.; Grigorean, Gabriela; Li, Wen-Jun; Dekas, Anne E.; Pett-Ridge, Jennifer; Dodsworth, Jeremy A.; Palmer, Marike; Hedlund, Brian P.
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Time-series metagenomics reveals changing protistan ecology of a temperate dimictic lake
err2024-07-20
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errKrinos, Arianna I.; Bowers, Robert M.; Rohwer, Robin R.; McMahon, Katherine D.; Woyke, Tanja; Schulz, Frederik
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scMicrobe PTA: near complete genomes from single bacterial cells
err2024-07-12
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errBowers, Robert M.; Gonzalez-Pena, Veronica; Wardhani, Kartika; Goudeau, Danielle; Blow, Matthew James; Udwary, Daniel; Klein, David; Vill, Albert C.; Brito, Ilana L.; Woyke, Tanja; Malmstrom, Rex R.; Gawad, Charles
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
err2024-07-06
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errJiao, Jian-Yu; Ma, Shi-Chun; Salam, Nimaichand; Zhou, Zhuo; Lian, Zheng-Han; Fu, Li; Chen, Ying; Peng, Cheng-Hui; Ouyang, Yu-Ting; Fan, Hui; Li, Ling; Yi, Yue; Zhang, Jing-Yi; Wang, Jing-Yuan; Liu, Lan; Gao, Lei; Oren, Aharon; Woyke, Tanja; Dodsworth, Jeremy A.; Hedlund, Brian P.; Li, Wen-Jun; Cheng, Lei
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
err2024-07-06
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errBhat, Aditi; Sharma, Reena; Desigan, Kumaran; Lucas, M. Mercedes; Mishra, Ankita; Bowers, Robert M.; Woyke, Tanja; Epstein, Brendan; Tiffin, Peter; Pueyo, Jose J.; Paape, Tim
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Fluorometric Analysis of Carrier-Protein-Dependent Biosynthesis through a Conformationally Sensitive Solvatochromic Pantetheinamide Probe
err2024-06-23
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PREAI
errMiyada, Matthew G.; Choi, Yuran; Stepanauskas, Ramunas; Woyke, Tanja; La Clair, James J.; Burkart, Michael D.
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Genetic and Functional Diversity Help Explain Pathogenic, Weakly Pathogenic, and Commensal Lifestyles in the Genus Xanthomonas
err2024-04-22
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errPena, Michelle M.; Bhandari, Rishi; Bowers, Robert M.; Weis, Kylie; Newberry, Eric; Wagner, Naama; Pupko, Tal; Jones, Jeffrey B.; Woyke, Tanja; Vinatzer, Boris A.; Jacques, Marie-Agnes; Potnis, Neha
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Genomes OnLine Database (GOLD) v.8: overview and updates (vol 49,Pg D723-D733,2021)
err2024-02-28
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errMukherjee, Supratim; Stamatis, Dimitri; Bertsch, Jon; Ovchinnikova, Galina; Sundaramurthi, Jagadish Chandrabose; Lee, Janey; Kandimalla, Mahathi; Woyke, Tanja; Eloe-Fardosh, Emiley A.; Kyrpides, Nikos C.; Reddy, T. B. K.
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
err2023-11-01
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errCamargo, Antonio Pedro; Call, Lee; Roux, Simon; Nayfach, Stephen; Huntemann, Marcel; Palaniappan, Krishnaveni; Ratner, Anna; Chu, Ken; Mukherjeep, Supratim; Reddy, T. B. K.; Chen, I-Min A.; Ivanova, Natalia N.; Eloe-Fadrosh, Emiley A.; Woyke, Tanja; Baltrus, David A.; Castaneda-Barba, Salvador; de la Cruz, Fernando; Funnell, Barbara E.; Hall, James P. J.; Mukhopadhyay, Aindrila; Rocha, Eduardo P. C.; Stalder, Thibault; Top, Eva; Kyrpides, Nikos C.
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Synthase-selected sorting approach identifies a beta-lactone synthase in a nudibranch symbiotic bacterium
err2023-06-13
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errDzunkova, Maria; La Clair, James J.; Tyml, Tomas; Doud, Devin; Schulz, Frederik; Piquer-Esteban, Samuel; Sanchis, Dafne Porcel; Osborn, Andrew; Robinson, David; Louie, Katherine B.; Bowen, Ben P.; Bowers, Robert M.; Lee, Janey; Arnau, Vicente; Diaz-Villanueva, Wladimiro; Stepanauskas, Ramunas; Gosliner, Terrence; Date, Shailesh V.; Northen, Trent R.; Cheng, Jan-Fang; Burkart, Michael D.; Woyke, Tanja
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