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Olga G. Troyanskaya

princeton university

79H-index
315Paper Count
3.2WCitation Count
Published Papers 122
Publication Date
Single-cell profiling reveals epithelial and immune responses in BK polyomavirus-infected human kidney biopsies
err2026-04-22
err0
PREAI
errMarvin, Tess; Sealfon, Rachel; McCown, Phillip J.; AlAkwaa, Fadhl; Farkash, Evan A.; Otto, Edgar A.; Eichinger, Felix; An, Ping; Menon, Rajasree; Berthier, Celine C.; Reed, Tavis J.; Arrowsmith, Paula; Subramanian, Lalita; Shaffer, Kelly J.; Norman, Silas P.; Gumber, Ramnika; Imperiale, Michael J.; Pipas, James M.; Troyanskaya, Olga G.; Kretzler, Matthias; Theesfeld, Chandra L.; Naik, Abhijit S.
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HumanBase: an interactive AI platform for human biology
err2026-01-14
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PREAI
errRachel S. G. Sealfon; Chandra L. Theesfeld; Julien Funk; Natalie Sauerwald; Aaron K. Wong; Olga G. Troyanskaya
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Exploring How Workflow Variations in Denaturation-Based Assays Impact Global Protein-Protein Interaction Predictions
err2026-01-01
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errOAAI
errReed, Tavis J.; Haubold, Laura M.; Hutton, Josiah E.; Troyanskaya, Olga G.; Cristea, Ileana M.
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Age-related nigral downregulation of the Parkinson’s risk factor FAM49B primes human microglia for inflammaging
err2025-12-19
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errOAAI
errJacqueline Martin; Guan-Ju Lai; Christopher Y. Park; Colista West; Trevor Van Brunt; Samarah Ahmed; Saheed Lawal; Maya Dickson; Taylor Russo; Wendy Akmentin; Molly Weiner; Zachary B. Hobel; Benjamin Kolisnyk; Joshua L. Plotkin; Olga G. Troyanskaya; Markus Riessland
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Innate immune molecular landscape following controlled human influenza virus infection
err2025-09-16
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PREAI
errWilliam Thistlethwaite; Sindhu Vangeti; Wan-Sze Cheng; Pankaj Agarwal; Antonio Cappuccio; Wenliang Wang; Bei Wei; Rachel Myers; Aliza B. Rubenstein; Daniel Chawla; Manoj Hariharan; Micah T. McClain; Thomas W. Burke; Steven H. Kleinstein; Joseph R. Ecker; Christopher W. Woods; William J. Greenleaf; Xi Chen; Irene Ramos; Elena Zaslavsky; Thomas G. Evans; Olga G. Troyanskaya; Stuart C. Sealfon
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3D chromatin structures precede genome activation in Drosophila embryogenesis
err2025-09-15
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errOAAI
errGabriel A. Dolsten; Evan M. Cofer; Xin Yang Bing; Benjamin Brack; Marcus Curlin; Chandra L. Theesfeld; Olga G. Troyanskaya; Michael S. Levine; Yuri Pritykin
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Decomposition of phenotypic heterogeneity in autism reveals underlying genetic programs
err2025-07-09
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errOAAI
errAviya Litman; Natalie Sauerwald; LeeAnne Green Snyder; Jennifer Foss-Feig; Christopher Y. Park; Yun Hao; Ilan Dinstein; Chandra L. Theesfeld; Olga G. Troyanskaya
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Deep Learning Sequence Models for Transcriptional Regulation
err2024-08-27
err2
PREAI
errSokolova, Ksenia; Chen, Kathleen M.; Hao, Yun; Zhou, Jian; Troyanskaya, Olga G.
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NOVEL CNS SENSING SYNNOTCH-CAR T CELLS FOR TARGETING DIFFUSE MIDLINE GLIOMA
err2024-06-18
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errOAAI
errLakshmanachetty, Senthilnath; Simic, Milos; Haegelin, Jeffrey; Watchmaker, Payal; Long, Haoyu; Deucker, Jason; Zhu, Robert; Sheperd, Chanelle; Yu, Wei; Ng, Ben; Wang, Yuan; Troyanskaya, Olga; Cardarelli, Lia; Sidhu, Sachdev; Lim, Wendell; Okada, Hideho
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New genetic signals for lung function highlight pathways and chronic obstructive pulmonary disease associations across multiple ancestries (vol 51, pg 481, 2019)
err2024-04-19
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errOAAI
errShrine, Nick; Guyatt, Anna L.; Erzurumluoglu, A. Mesut; Jackson, Victoria E.; Hobbs, Brian D.; Melbourne, Carl A.; Batini, Chiara; Fawcett, Katherine A.; Song, Kijoung; Sakornsakolpat, Phuwanat; Li, Xingnan; Boxall, Ruth; Reeve, Nicola F.; Obeidat, Ma'en; Zhao, Jing Hua; Wielscher, Matthias; Weiss, Stefan; Kentistou, Katherine A.; Cook, James P.; Sun, Benjamin B.; Zhou, Jian; Hui, Jennie; Karrasch, Stefan; Imboden, Medea; Harris, Sarah E.; Marten, Jonathan; Enroth, Stefan; Kerr, Shona M.; Surakka, Ida; Vitart, Veronique; Lehtimaeki, Terho; Allen, Richard J.; Bakke, Per S.; Beaty, Terri H.; Bleecker, Eugene R.; Bosse, Yohan; Brandsma, Corry-Anke; Chen, Zhengming; Crapo, James D.; Danesh, John; DeMeo, Dawn L.; Dudbridge, Frank; Ewert, Ralf; Gieger, Christian; Gulsvik, Amund; Hansell, Anna L.; Hao, Ke; Hoffman, Joshua D.; Hokanson, John E.; Homuth, Georg; Joshi, Peter K.; Joubert, Philippe; Langenberg, Claudia; Li, Xuan; Li, Liming; Lin, Kuang; Lind, Lars; Locantore, Nicholas; Luan, Jian'an; Mahajan, Anubha; Maranville, Joseph C.; Murray, Alison; Nickle, David C.; Packer, Richard; Parker, Margaret M.; Paynton, Megan L.; Porteous, David J.; Prokopenko, Dmitry; Qiao, Dandi; Rawal, Rajesh; Runz, Heiko; Sayers, Ian; Sin, Don D.; Smith, Blair H.; Artigas, Maria Soler; Sparrow, David; Tal-Singer, Ruth; Timmers, Paul R. H. J.; Van den Berge, Maarten; Whittaker, John C.; Woodruff, Prescott G.; Yerges-Armstrong, Laura M.; Troyanskaya, Olga G.; Raitakari, Olli T.; Kaehoenen, Mika; Polasek, Ozren; Gyllensten, Ulf; Rudan, Igor; Deary, Ian J.; Probst-Hensch, Nicole M.; Schulz, Holger; James, Alan L.; Wilson, James F.; Stubbe, Beate; Zeggini, Eleftheria; Jarvelin, Marjo-Riitta; Wareham, Nick; Silverman, Edwin K.; Hayward, Caroline; Morris, Andrew P.; Butterworth, Adam S.; Scott, Robert A.; Walters, Robin G.; Meyers, Deborah A.; Cho, Michael H.; Strachan, David P.; Hall, Ian P.; Tobin, Martin D.; Wain, Louise V.
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A cell autonomous regulator of neuronal excitability modulates tau in Alzheimer's disease vulnerable neurons
errBRAIN
IF11.7
err2024-03-11
err0
errOAAI
errRodriguez-Rodriguez, Patricia; Arroyo-Garcia, Luis Enrique; Tsagkogianni, Christina; Li, Lechuan; Wang, Wei; Vegvari, Akos; Salas-Allende, Isabella; Plautz, Zakary; Cedazo-Minguez, Angel; Sinha, Subhash C.; Troyanskaya, Olga; Flajolet, Marc; Yao, Vicky; Roussarie, Jean-Pierre
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Tapioca: a platform for predicting de novo protein-protein interactions in dynamic contexts
err2024-02-15
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PREAI
errReed, Tavis. J.; Tyl, Matthew. D.; Tadych, Alicja; Troyanskaya, Olga. G.; Cristea, Ileana. M.
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The chromatin landscape of healthy and injured cell types in the human kidney
err2024-01-10
err8
errOAAI
errGisch, Debora L.; Brennan, Michelle; Lake, Blue B.; Basta, Jeannine; Keller, Mark S.; Melo Ferreira, Ricardo; Akilesh, Shreeram; Ghag, Reetika; Lu, Charles; Cheng, Ying-Hua; Collins, Kimberly S.; Parikh, Samir V.; Rovin, Brad H.; Robbins, Lynn; Stout, Lisa; Conklin, Kimberly Y.; Diep, Dinh; Zhang, Bo; Knoten, Amanda; Barwinska, Daria; Asghari, Mahla; Sabo, Angela R.; Ferkowicz, Michael J.; Sutton, Timothy A.; Kelly, Katherine J.; De Boer, Ian H.; Rosas, Sylvia E.; Kiryluk, Krzysztof; Hodgin, Jeffrey B.; Alakwaa, Fadhl; Winfree, Seth; Jefferson, Nichole; Turkmen, Aydin; Gaut, Joseph P.; Gehlenborg, Nils; Phillips, Carrie L.; El-Achkar, Tarek M.; Dagher, Pierre C.; Hato, Takashi; Zhang, Kun; Himmelfarb, Jonathan; Kretzler, Matthias; Mollah, Shamim; Lake, Blue; Morales, Alexander; Stillman, Isaac; Lecker, Stewart; Bogen, Steve; Verma, Ashish; Yu, Guanghao; Schmidt, Insa; Henderson, Joel; Beck, Laurence; Yadati, Pranav; Waikar, Sushrut; Amodu, Afolarin A.; Maikhor, Shana; Ilori, Titlayo; Colona, Mia R.; Weins, Astrid; Mcmahon, Gearoid; Hacohen, Nir; Greka, Anna; Marshall, Jamie L.; Hoover, Paul J.; Viswanathan, Vidya S.; Crawford, Dana; Aulisio, Mark; Bush, William; Chen, Yijiang; Madabhushi, Anant; O'Malley, Charles; Gadegbeku, Crystal; Sendrey, Dianna; Poggio, Emilio; O'Toole, John; Sedor, John; Taliercio, Jonathan; Bush, Lakeshia; Herlitz, Leal; Palmer, Ellen; Nguyen, Jane; Spates-Harden, Kassandra; Cooperman, Leslie; Jolly, Stacey; Vinovskis, Carissa; Bomback, Andrew; Barasch, Jonathan; Kiryluk, Krzysztof; Appelbaum, Paul; D'Agati, Vivette; Berrouet, Cecilia; Mehl, Karla; Sabatello, Maya; Shang, Ning; Balderes, Olivia; Canetta, Pietro A.; Kudose, Satoru; de Pinho Goncalves, Joana; Migas, Lukasz; van de Plas, Raf; Lardenoije, Roy; Barisoni, Laura; Rennke, Helmut; Verdoes, Abraham; Sabo, Angela; Gisch, Debora Lidia; Williams, James; Kelly, Katherine; Dunn, Kenneth; Eadon, Michael; Ferkowicz, Michael; Dagher, Pierre; Winfree, Seth; Bledsoe, Sharon; Wofford, Stephanie; (El-Achkar), Tarek Ashkar; Sutton, Timothy; Bowen, William; Slade, Austen; Record, Elizabeth; Cheng, Yinghua; Jain, Yashvardhan; Herr, Bruce; Quardokus, Ellen; Wang, Ashley; Villalobos, Celia Pamela Corona; Parikh, Chirag; Atta, Mohamed; Menez, Steven; Wen, Yumeng; Xu, Alan; Bernard, Lauren; Johansen, Camille; Chen, Sarah; Rosas, Sylvia; Donohoe, Isabel; Sun, Jennifer; Knight, Richard; Shpigel, Anna; Bebiak, Jack; Saul, John; Ardayfio, Joseph; Koewler, Robert; Pinkeney, Roy; Campbell, Taneisha; Azeloglu, Evren; Nadkarni, Girish; He, John; Tokita, Joji; Campbell, Kirk; Patel, Marissa; Lefferts, Sean; Iyengar, Srinivas Ravi; Ward, Stephen; Coca, Steven; He, Cijang; Xiong, Yuguang; Prasad, Pottumarthi; Rovin, Brad; Shapiro, John P.; Parikh, Samir; Madhavan, Sethu M.; Lukowski, Jessica; Velickovic, Dusan; Pasa-Tolic, Ljiljana; Oliver, George (Holt); Troyanskaya, Olga; Sealfon, Rachel; Mao, Weiguang; Wong, Aaron; Pollack, Ari; Goltsev, Yury; Ginley, Brandon; Lutnick, Brendon; Nolan, Garry; Anjani, Kavya; Mukatash, Tariq; Laszik, Zoltan G.; Campos, Baltazar; Thajudeen, Bijin; Beyda, David; Bracamonte, Erika; Brosius, Frank; Woodhead, Gregory; Mendoza, Katherine; Marquez, Nicole; Scott, Raymond; Tsosie, Rebecca; Saunders, Milda; Rike, Adele; Woodle, E. Steve; Lee, Paul J.; Alloway, Rita R.; Shi, Tiffany; Hsieh, Elena; Kendrick, Jessica; Thurman, Joshua; Wrobel, Julia; Pyle, Laura; Bjornstad, Petter; Lucarelli, Nicholas; Sarder, Pinaki; Renteria, Amada; Ricardo, Ana; Srivastava, Anand; Redmond, Devona; Carmona-Powell, Eunice; Bui, James; Lash, James; Fox, Monica; Meza, Natalie; Gaba, Ron; Setty, Suman; Kelly, Tanika; Lienczewski, Chrysta; Demeke, Dawit; Otto, Edgar; Ascani, Heather; Hodgin, Jeff; Schaub, Jennifer; Hartman, John; Mariani, Laura; Bitzer, Markus; Rose, Michael; Bonevich, Nikki; Conser, Ninive; Mccown, Phillip; Dull, Rachel; Menon, Rajasree; Reamy, Rebecca; Eddy, Sean; Balis, Ul; Blanc, Victoria; Nair, Viji; He, Yongqun Oliver; Wright, Zachary; Steck, Becky; Luo, Jinghui; Frey, Renee; Coleman, Alyson; Henderson-Brown, Dorisann; Berge, Jerica; Caramori, Maria Luiza; Adeyi, Oyedele; Nachman, Patrick; Safadi, Sami; Flanagan, Siobhan; Ma, Sisi; Klett, Susan; Wolf, Susan; Harindhanavudhi, Tasma; Rao, Via; Mottl, Amy; Froment, Anne; Zeitler, Evan; Bream, Peter; Kelley, Sara; Rosengart, Matthew; Elder, Michele; Palevsky, Paul; Murugan, Raghavan; Hall, Daniel E.; Bender, Filitsa; Winters, James; Kellum, John A.; Gilliam, Matthew; Tublin, Mitchell; Tan, Roderick; Zhang, Guanshi; Sharma, Kumar; Venkatachalam, Manjeri; Hendricks, Allen; Kermani, Asra; Torrealba, Jose; Vazquez, Miguel; Wang, Nancy; Cai, Qi; Miller, Richard Tyler; Ma, Shihong; Hedayati, Susan; Hoofnagle, Andrew; Wangperawong, Artit; Berglund, Ashley; Dighe, Ashveena L.; Young, Bessie; Larson, Brandon; Berry, Brooke; Alpers, Charles; Limonte, Christine; Stutzke, Christy; Roberts, Glenda; de Boer, Ian; Snyder, Jaime; Phuong, Jimmy; Carson, Jonas; Rezaei, Kasra; Tuttle, Katherine; Brown, Keith; Blank, Kristina; Sarkisova, Natalya; Jefferson, Nichole; Mcclelland, Robyn; Mooney, Sean; Nam, Yunbi; Wilcox, Adam; Park, Christopher; Dowd, Frederick; Williams, Kayleen; Grewenow, Stephanie M.; Daniel, Stephen; Shankland, Stuart; Pamreddy, Annapurna; Ye, Hongping; Montellano, Richard; Bansal, Shweta; Pillai, Anil; Zhang, Dianbo; Park, Harold; Patel, Jiten; Sambandam, Kamalanathan; Basit, Mujeeb; Wen, Natasha; Moe, Orson W.; Toto, Robert D.; Lee, Simon C.; Sharman, Kavya; Caprioli, Richard M.; Fogo, Agnes; Allen, Jamie; Spraggins, Jeffrey; Djambazova, Katerina; de Caestecker, Mark; Dufresne, Martin; Farrow, Melissa; Vijayan, Anitha; Minor, Brittany; Nwanne, Gerald; Gaut, Joseph; Conlon, Kristine; Kaushal, Madhurima; Diettman, Sabine M.; Victoria Castro, Angela M.; Moledina, Dennis; Wilson, Francis P.; Moeckel, Gilbert; Cantley, Lloyd; Shaw, Melissa; Kakade, Vijayakumar; Arora, Tanima; Jain, Sanjay; Rauchman, Michael; Eadon, Michael T.
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Peak-agnostic high-resolution cis-regulatory circuitry mapping using single cell multiome data
err2023-12-12
err1
errOAAI
errZhang, Zidong; Ruf-Zamojski, Frederique; Zamojski, Michel; Bernard, Daniel J.; Chen, Xi; Troyanskaya, Olga G.; Sealfon, Stuart C.
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Atlas of primary cell-type-specific sequence models of gene expression and variant effects
err2023-09-01
err4
errOAAI
errSokolova, Ksenia; Theesfeld, Chandra L.; Wong, Aaron K.; Zhang, Zijun; Dolinski, Kara; Troyanskaya, Olga G.
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Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data (vol 3, pg 644, 2023)
err2023-08-31
err1
errOAAI
errChen, Xi; Wang, Yuan; Cappuccio, Antonio; Cheng, Wan-Sze; Zamojski, Frederique Ruf; Nair, Venugopalan D.; Miller, Clare M.; Rubenstein, Aliza B.; Nudelman, German; Tadych, Alicja; Theesfeld, Chandra L.; Vornholt, Alexandria; George, Mary-Catherine; Ruffin, Felicia; Dagher, Michael; Chawla, Daniel G.; Soares-Schanoski, Alessandra; Spurbeck, Rachel R.; Ndhlovu, Lishomwa C.; Sebra, Robert; Kleinstein, Steven H.; Letizia, Andrew G.; Ramos, Irene; Fowler Jr, Vance G.; Woods, Christopher W.; Zaslavsky, Elena; Troyanskaya, Olga G.; Sealfon, Stuart C.
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Mapping disease regulatory circuits at cell-type resolution from single-cell multiomics data
err2023-07-25
err6
errOAAI
errChen, Xi; Wang, Yuan; Cappuccio, Antonio; Cheng, Wan-Sze; Zamojski, Frederique Ruf; Nair, Venugopalan D.; Miller, Clare M.; Rubenstein, Aliza B.; Nudelman, German; Tadych, Alicja; Theesfeld, Chandra L.; Vornholt, Alexandria; George, Mary-Catherine; Ruffin, Felicia; Dagher, Michael; Chawla, Daniel G.; Soares-Schanoski, Alessandra; Spurbeck, Rachel R.; Ndhlovu, Lishomwa C.; Sebra, Robert; Kleinstein, Steven H.; Letizia, Andrew G.; Ramos, Irene; Fowler Jr, Vance G.; Woods, Christopher W.; Zaslavsky, Elena; Troyanskaya, Olga G.; Sealfon, Stuart C.
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Involvement of Histone Demethylase LSD1 in Short-Time-Scale Gene Expression Changes during Cell Cycle Progression in Embryonic Stem Cells
err2023-03-20
err38
errOAAI
errNair, Venugopalan D.; Ge, Yongchao; Balasubramaniyan, Natarajan; Kim, Jaeyun; Okawa, Yuya; Chikina, Maria; Troyanskaya, Olga; Sealfon, Stuart C.
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A methylation clock model of mild SARS-CoV-2 infection provides insight into immune dysregulation
err2023-03-15
err7
errOAAI
errMao, Weiguang; Miller, Clare M.; Nair, Venugopalan D.; Ge, Yongchao; Amper, Mary Anne S.; Cappuccio, Antonio; George, Mary-Catherine; Goforth, Carl W.; Guevara, Kristy; Marjanovic, Nada; Nudelman, German; Pincas, Hanna; Ramos, Irene; Sealfon, Rachel S. G.; Soares-Schanoski, Alessandra; Vangeti, Sindhu; Vasoya, Mital; Weir, Dawn L.; Zaslavsky, Elena; Biobank Team, Seunghee; Kim-Schulze, Seunghee; Gnjatic, Sacha; Merad, Miriam; Letizia, Andrew G.; Troyanskaya, Olga G.; Sealfon, Stuart C.; Chikina, Maria
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