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A

Alfredo Herrera‐Estrella

Cinvestav

59H-index
231Paper Count
1.3WCitation Count
Published Papers 70
Publication Date
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Phenogenomics reveals the ecology and evolution of Trichoderma fungi for sustainable agriculture
errNature Microbiology
IF19.4
err2026-03-03
err0
errOAAI
errAndrei S. Steindorff; Feng M. Cai; Mingyue Ding; Siqi Jiang; Lea Atanasova; Scott E. Baker; Jomal Rodrigues Barbosa-Filho; Gunseli Bayram Akcapinar; Daren W. Brown; Priscila Chaverri; Peijie Chen; Komal Chenthamara; Chris Daum; Elodie Drula; Mukesh Dubey; Mikael Brandström Durling; Daniel Flatschacher; Thomas Ebner; Tamás Emri; Renwei Gao; Raphaela Castro Georg; Bernard Henrissat; Rosa Hermosa; Alfredo Herrera-Estrella; Wolfgang Hinterdobler; Philipp Kainz; Magnus Karlsson; László Kredics; Christian P. Kubicek; Alan Kuo; Kurt LaButti; Anna Lipzen; Matteo Lorito; Robert L. Mach; Gelsomina Manganiello; Tamás Marik; Natalia Martinez-Reyes; Michael Mayrhofer-Reinhartshuber; Márton Miskei; Marie-Claude Moisan; Stephen Mondo; Enrique Monte; Vivian Ng; Guan Pang; Jasmyn Pangilinan; Mao Peng; Edoardo Piombo; István Pócsi; Mohammad Javad Rahimi; Sumitha K. Reddy; Robert Riley; Sabrina Sarrocco; Matthias Schmal; Monika Schmoll; Attila Szűcs; Sheridan L. Woo; Oded Yarden; Susanne Zeilinger; Christian Zimmermann; Ekaterina Shelest; Adrian Tsang; Randy Berka; Ronald P. de Vries; Igor V. Grigoriev; Irina S. Druzhinina
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errSave
Transcriptome and metabolite profiles reveal differential molecular responses of wild and cultivated amaranth species to water deficit and salt stress
errPlanta
IF3.8
err2026-01-29
err0
errOAAI
errAna P. Barba de la Rosa; Jose Cetz; Esaú Bojórquez-Velázquez; José P. Martínez; Antonio De León-Rodríguez; Eduardo Espitia-Rangel; Alfredo Herrera-Estrella
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errSave
Genomic Diversity and Geographic Distribution of SARS-CoV-2 in Mexico: Insights From 4 Years of Genomic Surveillance
errArchives of Medical Research
IF3.4
err2025-09-04
err0
PREAI
errBlanca Taboada; Selene Zárate; José Esteban Muñoz-Medina; Alejandro Sanchez-Flores; Alfredo Herrera-Estrella; Bruno Gómez-Gil; Joel Armando Vazquez-Perez; Angel Gustavo Salas-Lais; Alida Zárate; Carlos F. Arias
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errSave
Genomic, socio-environmental, and sequencing capability patterns in the surveillance of SARS-CoV-2 in Latin America and the Caribbean up to 2023
errSCIENTIFIC REPORTS
IF3.9
err2025-04-26
err0
errOAAI
errConcha-Toloza, Macarena; Gonzalez, Luis Collado; Estrella, Alfredo Herrera; Do Porto, Dario Fernandez; Sanchez, Rebeca Campos; Molina-Mora, Jose Arturo
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errSave
Recovery of Novel Sequence Variants in Chemically Mutagenized Seed and Vegetatively Propagated Coffea arabica L.
errHORTICULTURAE
IF3
err2024-10-09
err0
errOAAI
errTill, Bradley J.; Jimenez-Madrigal, Jose P.; Herrera-Estrella, Alfredo; Atriztan-Hernandez, Karina; Gatica-Arias, Andres
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errSave
Comparative Proteomic Analysis of Wild and Cultivated Amaranth Species Seeds by 2-DE and ESI-MS/MS
errPLANTS-BASEL
IF4.1
err2024-09-29
err0
errOAAI
errBojorquez-Velazquez, Esau; Zamora-Briseno, Jesus Alejandro; Barrera-Pacheco, Alberto; Espitia-Rangel, Eduardo; Herrera-Estrella, Alfredo; de la Rosa, Ana Paulina Barba
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Argonaute and Dicer are essential for communication between Trichoderma atroviride and fungal hosts during mycoparasitism
errMICROBIOLOGY SPECTRUM
IF3.8
err2024-04-02
err0
errOAAI
errEnriquez-Felix, Eli Efrain; Perez-Salazar, Camilo; Rico-Ruiz, Jose Guillermo; de Carvalho, Ana Calheiros; Cruz-Morales, Pablo; Villalobos-Escobedo, Jose Manuel; Herrera-Estrella, Alfredo
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errSave
Exploration of low- frequency allelic variants of SARS- CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover
errMICROBIAL GENOMICS
IF4
err2024-03-21
err0
errOAAI
errGarcia-Lopez, Rodrigo; Taboada, Blanca; Zarate, Selene; Munoz-Medina, Jose Esteban; Salas-Lais, Angel Gustavo; Herrera-Estrella, Alfredo; Boukadida, Celia; Vazquez-Perez, Joel Armando; Gomez-Gil, Bruno; Sanchez-Flores, Alejandro; Arias, Carlos F.
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errSave
Inferring co-expression networks of Arabidopsis thaliana genes during their interaction with Trichoderma spp.
errSCIENTIFIC REPORTS
IF3.9
err2024-01-30
err0
errOAAI
errVega-Arroy, Javier-David; Herrera-Estrella, Alfredo; Ovando-Vazquez, Cesare; Casas-Flores, Sergio
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errSave
SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico
errMICROBIAL GENOMICS
IF4
err2023-12-19
err2
errOAAI
errTaboada, Blanca Itzelt; Zarate, Selene; Garcia-Lopez, Rodrigo; Munoz-Medina, Jose Esteban; Gomez-Gil, Bruno; Herrera-Estrella, Alfredo; Sanchez-Flores, Alejandro; Salas-Lais, Angel Gustavo; Roche, Benjamin; Martinez-Morales, Gabriela; Zarate, Hermilo Dominguez; Molina, Celida Duque; Hernandez, Ricardo Aviles; Lopez, Susana; Arias, Carlos F.
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errSave
LOX1-and PLP1-dependent transcriptional reprogramming is essential for injury-induced conidiophore development in a filamentous fungus
errMICROBIOLOGY SPECTRUM
IF3.8
err2023-12-12
err1
errOAAI
errCamargo-Escalante, Martin O.; Balcazar-Lopez, Edgar; Mendez, Exsal M. Albores; Winkler, Robert; Herrera-Estrella, Alfredo
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errSave
ATM and ATR, two central players of the DNA damage response, are involved in the induction of systemic acquired resistance by extracellular DNA, but not the plant wound response
errFRONTIERS IN IMMUNOLOGY
IF5.9
err2023-05-15
err8
errOAAI
errVega-Munoz, Isaac; Herrera-Estrella, Alfredo; Martinez-de la Vega, Octavio; Heil, Martin
errShare
errSave
Plant disease management in the post-genomic era: from functional genomics to genome editing, Volume II
errFRONTIERS IN MICROBIOLOGY
IF4.5
err2023-05-10
err0
errOAAI
errSarrocco, Sabrina; Herrera-Estrella, Alfredo; Collinge, David B.
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errSave
SARS-CoV-2 BW lineage, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations
errINFECTION
IF3.6
err2023-04-14
err4
errOAAI
errGarcia-Lopez, Rodrigo; Rivera-Gutierrez, Xaira; Rosales-Rivera, Mauricio; Zarate, Selene; Munoz-Medina, Jose Esteban; Roche, Benjamin; Herrera-Estrella, Alfredo; Gomez-Gil, Bruno; Sanchez-Flores, Alejandro; Taboada, Blanca; Arias, Carlos F.
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errSave
Overview of the SARS-CoV-2 genotypes circulating in Latin America during 2021
errFRONTIERS IN PUBLIC HEALTH
IF3.4
err2023-03-02
err7
errOAAI
errMolina-Mora, Jose Arturo; Reales-Gonzalez, Jhonnatan; Camacho, Erwin; Duarte-Martinez, Francisco; Tsukayama, Pablo; Soto-Garita, Claudio; Brenes, Hebleen; Cordero-Laurent, Estela; Ribeiro dos Santos, Andrea; Guedes Salgado, Claudio; Santos Silva, Caio; Santana de Souza, Jorge; Nunes, Gisele; Negri, Tatianne; Vidal, Amanda; Oliveira, Renato; Oliveira, Guilherme; Munoz-Medina, Jose Esteban; Salas-Lais, Angel Gustavo; Mireles-Rivera, Guadalupe; Sosa, Ezequiel; Turjanski, Adrian; Monzani, Maria Cecilia; Carobene, Mauricio G.; Remes Lenicov, Federico; Schottlender, Gustavo; Fernandez Do Porto, Dario A.; Kreuze, Jan Frederik; Sacristan, Luisa; Guevara-Suarez, Marcela; Cristancho, Marco; Campos-Sanchez, Rebeca; Herrera-Estrella, Alfredo
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errSave
Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants
errVIRUSES-BASEL
IF3.5
err2023-01-15
err6
errOAAI
errZarate, Selene; Taboada, Blanca; Rosales-Rivera, Mauricio; Garcia-Lopez, Rodrigo; Munoz-Medina, Jose Esteban; Sanchez-Flores, Alejandro; Herrera-Estrella, Alfredo; Gomez-Gil, Bruno; Selem Mojica, Nelly; Salas-Lais, Angel Gustavo; Vazquez-Perez, Joel Armando; Cabrera-Gaytan, David Alejandro; Fernandes-Matano, Larissa; Uribe-Noguez, Luis Antonio; Chale-Dzul, Juan Bautista; Maldonado Meza, Brenda Irasema; Mejia-Nepomuceno, Fidencio; Perez-Padilla, Rogelio; Gutierrez-Rios, Rosa Maria; Loza, Antonio; Roche, Benjamin; Lopez, Susana; Arias, Carlos F.
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errSave
Two-year follow-up of the COVID-19 pandemic in Mexico
errFRONTIERS IN PUBLIC HEALTH
IF3.4
err2023-01-13
err15
errOAAI
errLoza, Antonio; Wong-Chew, Rosa Maria; Jimenez-Corona, Maria-Eugenia; Zarate, Selene; Lopez, Susana; Ciria, Ricardo; Palomares, Diego; Garcia-Lopez, Rodrigo; Isa, Pavel; Taboada, Blanca; Rosales, Mauricio; Boukadida, Celia; Herrera-Estrella, Alfredo; Mojica, Nelly Selem; Rivera-Gutierrez, Xaira; Munoz-Medina, Jose Esteba; Salas-Lais, Angel Gustavo; Sanchez-Flores, Alejandro; Vazquez-Perez, Joel Armando; Arias, Carlos F.; Gutierrez-Rios, Rosa Maria
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errSave
Carbon-concentrating mechanisms in pods are key elements for terminal drought resistance in Phaseolus vulgaris
errJOURNAL OF EXPERIMENTAL BOTANY
IF5.7
err2022-12-21
err3
PREAI
errGonzalez-Lemes, Ingrid; Acosta-Maspons, Alexis; Cetz-Chel, Jose E.; Polania, Jose A.; Acosta-Gallegos, Jorge A.; Herrera-Estrella, Alfredo; Covarrubias, Alejandra A.
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Genomic and Morphological Differentiation of Spirit Producing Agave angustifolia Traditional Landraces Cultivated in Jalisco, Mexico
errPLANTS-BASEL
IF4.1
err2022-08-31
err11
errOAAI
errCabrera-Toledo, Danae; Mendoza-Galindo, Eddy; Larranaga, Nerea; Herrera-Estrella, Alfredo; Vasquez-Cruz, Marilyn; Hernandez-Hernandez, Tania
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Circadian oscillations in Trichoderma atroviride and the role of core clock components in secondary metabolism, development, and mycoparasitism against the phytopathogen Botrytis cinerea
errELIFE
IF0
err2022-08-11
err13
errOAAI
errHenriquez-Urrutia, Marlene; Spanner, Rebecca; Olivares-Yanez, Consuelo; Seguel-Avello, Aldo; Perez-Lara, Rodrigo; Guillen-Alonso, Hector; Winkler, Robert; Herrera-Estrella, Alfredo; Canessa, Paulo; Larrondo, Luis F.
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Research Directions

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Co-authors
Cooperation Journals
B
Bernard Henrissat
H-index: 170 · Papers: 1.1K
J
Joseph Heitman
H-index: 134 · Papers: 1.1K
R
Roderic Guigó
H-index: 126 · Papers: 704
I
Igor V. Grigoriev
H-index: 120 · Papers: 858
J
Jeremy Schmutz
H-index: 112 · Papers: 511
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