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Stephen D. Bentley

Peter Doherty Institute

102H-index
501Paper Count
4.5WCitation Count
Published Papers 264
Publication Date
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Epidemiological, immunological and virulence characteristics of persistent Streptococcus pneumoniae vaccine serotypes following vaccine introduction
errNature Communications
IF15.7
err2026-05-15
err0
errOAAI
errPaige Skoko; Sam Manna; Laura K. Boelsen; Jason Hinds; Stephanie W. Lo; Casey L. Pell; Belinda D. Ortika; Rachel A. Higgins; Vicki Bennett-Wood; Hanwen Hou; Odgerel Tundev; Eileen M. Dunne; Cattram D. Nguyen; Fiona M. Russell; E. Kim Mulholland; Tuya Mungun; Paul V. Licciardi; Claire von Mollendorf; Stephen D. Bentley; Catherine Satzke
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Strain-level transmission inference across multi-kingdom metagenomic data using TRACS
errNature Microbiology
IF19.4
err2026-04-01
err0
errOAAI
errTonkin-Hill, Gerry; Shao, Yan; Zarebski, Alexander E.; Mallawaarachchi, Sudaraka; Xie, Ouli; Maklin, Tommi; Thorpe, Harry A.; Davies, Mark R.; Bentley, Stephen D.; Lawley, Trevor D.; Corander, Jukka
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Population snapshot of Streptococcus pneumoniae causing invasive disease among adults aged ≥18 years in South Africa before and after implementation of pneumococcal conjugate vaccines in 2005-2020
errMICROBIAL GENOMICS
IF4
err2025-11-01
err0
PREAI
errNdlangisa, Kedibone Maria; Lekhuleni, Cebile; Skosana, Happy; De Gouveia, Linda; Meiring, Susan; Walaza, Sibongile; Quan, Vanessa; Bentley, Stephen D.; Lo, Stephanie W.; Cohen, Cheryl; Von Gottberg, Anne; Du Plessis, Mignon
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Genetic population structure of Haemophilus influenzae at local and global scales
errNature Microbiology
IF19.4
err2025-10-31
err0
errOAAI
errNeil MacAlasdair; Anna K. Pöntinen; Clare Ling; Sudaraka Mallawaarachchi; Janjira Thaipadungpanit; Francois H. Nosten; Claudia Turner; Stephen D. Bentley; Nicholas J. Croucher; Paul Turner; Jukka Corander
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SeroBA(v2.0) and SeroBAnk: a robust genome-based serotyping scheme and comprehensive atlas of capsular diversity in Streptococcus pneumoniae
errMICROBIAL GENOMICS
IF4
err2025-10-01
err0
PREAI
errLorenz, Oliver; King, Alannah C.; Hung, Harry C. H.; Ganaie, Feroze A.; Wyllie, Anne L.; Manna, Sam; Satzke, Catherine; van der Linden, Mark; Ravenscroft, Neil; Slotved, Hans-Christian; Mcgee, Lesley; Nahm, Moon H.; Bentley, Stephen D.; Lo, Stephanie W.
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Changes in carriage and serotype diversity of Streptococcus pneumoniae and other respiratory pathobionts in the UK between pre-PCV13 (2006-10), early-PCV13 (2010-12) and late-PCV13 (2012-23) periods
errPneumonia
IF6.2
err2025-09-18
err0
errOAAI
errDavid W. Cleary; Rebecca Anderson; Jessica Jones; Rebecca A. Gladstone; Karen L. Osman; Vanessa T. Devine; Denise E. Morris; Alex J. J. Lister; Stephen Gomer; Rebecca E. Hocknell; Emily J. Dineen; Johanna M. Jefferies; James Campling; Maria Lahuerta; Kyla Hayford; Jo Southern; Bradford D. Gessner; Stephanie W. Lo; Stephen D. Bentley; Saul N. Faust; Stuart C. Clarke
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errSave
Naturally acquired promoter variation influences Streptococcus pneumoniae infection outcomes
errCell Host & Microbe
IF18.7
err2025-09-02
err0
errOAAI
errThomas E. Barton; Angharad E. Green; Kate C. Mellor; Abigail E. McKnight; Katharina Bacher; Sumit Kumar; Kyle Newbold; Oliver Lorenz; Elizabeth Pohler; Manal S. Monshi; Adam Bryson; Felix Dube; Heather J. Zar; Mark P. Nicol; Stephen D. Bentley; Markus Hilty; Jason W. Rosch; Stephanie Lo; Daniel R. Neill
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errSave
High Propensity for Multidrug-Resistant Pneumococcal Shedding Among Adults Living With HIV on Stable Antiretroviral Therapy in Malawi
errOPEN FORUM INFECTIOUS DISEASES
IF3.8
err2025-08-01
err1
errOAAI
errSibale, Lusako L.; Kalata, Newton; Mitole, Ndaona; Nyazika, Tinashe K.; Phiri, Joseph A.; Kusakala, Alice; Khwiya, Mercy; Sagawa, Gift; Lo, Stephanie W.; Chaguza, Chrispin; Thindwa, Deus; Swarthout, Todd D.; French, Neil; Malisita, Ken; Kamng'ona, Arox; Ferreira, Daniela M.; Bentley, Stephen D.; Heyderman, Robert S.; Kwambana-Adams, Brenda A.; Jambo, Kondwani C.
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Within-host bacterial evolution and the emergence of pathogenicity
errNature Microbiology
IF19.4
err2025-07-25
err0
PREAI
errGerry Tonkin-Hill; Christopher Ruis; Stephen D. Bentley; Katrina A. Lythgoe; Josephine M. Bryant
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errSave
Long-term effects of azithromycin mass administration to reduce childhood mortality on Streptococcus pneumoniae antimicrobial resistance: a population-based, cross-sectional, follow-up carriage survey
errThe Lancet Infectious Diseases
IF0
err2025-06-02
err0
errOAAI
errAkuzike Kalizang'oma; Jia Mun Chan; Khumbo Kalua; Farouck Bonomali; Comfort Brown; Jacqueline Msefula; David Chaima; Lyson Samikwa; Harry Meleke; John D Hart; Alison Craik; Chrispin Chaguza; Rory Cave; Jennifer Cornick; Brenda Kwambana-Adams; Stephen D Bentley; Thandie Mwalukomo; Dorothee Van Breevoort; Robin Bailey; Ana Belén Ibarz-Pavón; Todd D Swarthout; Neil French; Robert S Heyderman
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Genomic characterization of group B Streptococcus from Argentina: insights into prophage diversity, virulence factors and antibiotic resistance genes
errMICROBIAL GENOMICS
IF4
err2025-04-23
err0
errOAAI
errKovacec, Veronica; Di Gregorio, Sabrina; Pajon, Mario; Khan, Uzma Basit; Poklepovich, Tomas; Campos, Josefina; Crestani, Chiara; Bentley, Stephen D.; Jamrozy, Dorota; Mollerach, Marta; Bonofiglio, Laura
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Epidemiology of Group B Streptococcus: Maternal Colonization and Infant Disease in Kampala, Uganda
errOPEN FORUM INFECTIOUS DISEASES
IF3.8
err2025-04-01
err0
errOAAI
errKyohere, Mary; Davies, Hannah Georgia; Karampatsas, Konstantinos; Cantrell, Liberty; Musoke, Philippa; Nakimuli, Annettee; Tusubira, Valerie; Nsimire, Juliet Sendagala; Jamrozy, Dorota; Khan, Uzma Basit; Bentley, Stephen D.; Spiller, Owen B.; Farley, Caitlin; Hall, Tom; Daniel, Olwenn; Beach, Simon; Andrews, Nick; Schrag, Stephanie J.; Cutland, Clare L.; Gorringe, Andrew; Leung, Stephanie; Taylor, Stephen; Heath, Paul T.; Cose, Stephen; Baker, Carol; Voysey, Merryn; Le Doare, Kirsty; Sekikubo, Musa
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Streptococcus pneumoniae serotype 33H: a novel serotype with frameshift mutations in the acetyltransferase gene wciG
errPNEUMONIA
IF6.2
err2025-03-25
err0
errOAAI
errManna, Sam; Ortika, Belinda D.; Werren, Joel P.; Pell, Casey L.; Gjuroski, Ilche; Lo, Stephanie W.; Hinds, Jason; Tundev, Odgerel; Dunne, Eileen M.; Gessner, Bradford D.; Russell, Fiona M.; Mulholland, E. Kim; Mungun, Tuya; von Mollendorf, Claire; Bentley, Stephen D.; Hilty, Markus; Ravenscroft, Neil; Satzke, Catherine
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Investigating two decades of Streptococcus pneumoniae bacteraemia in the Gelderland area, the Netherlands, using whole-genome sequencing
errMICROBIAL GENOMICS
IF4
err2025-03-18
err0
errOAAI
errFerreira, Ana D. Sanches; King, Alannah C.; Wolters, Femke; Wertheim, Heiman F. L.; Mulder, Bert; Swanink, Caroline M. A.; van der Gaast-de Jongh, Christa E.; Arends, Daan W.; van Sorge, Nina M.; Schaars, Carel; Hung, Harry C. H.; Hawkins, Paulina A.; McGee, Lesley; Bentley, Stephen D.; Veening, Jan-Willem; de Jonge, Marien I.; Lo, Stephanie W.; Cremers, Amelieke J. H.
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Agar-Dilution Is Comparable to Broth Dilution for MIC Determination in Streptococcus agalactiae
errANTIBIOTICS-BASEL
IF4.6
err2025-02-05
err0
errOAAI
errPortal, Edward A. R.; Farley, Caitlin; Iannetelli, Teresa; Coelho, Juliana; Efstratiou, Androulla; Bentley, Stephen D.; Chalker, Victoria J.; Spiller, Owen B.
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Discovery and Characterization of Pneumococcal Serogroup 36 Capsule Subtypes, Serotypes 36A and 36B (vol 61 , e00024-23 , 2023)
errJOURNAL OF CLINICAL MICROBIOLOGY
IF5.4
err2025-01-31
err0
errOAAI
errGanaie, Feroze A.; Saad, Jamil S.; Lo, Stephanie W.; Mcgee, Lesley; Bentley, Stephen D.; van Tonder, Andries J.; Hawkins, Paulina; Keenan, Jeremy D.; Calix, Juan J.; Nahm, Moon H.
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High prevalence and genetic diversity of multidrug-resistant and extended-spectrum ß-lactamase-producing Escherichia coli and Klebsiella pneumoniae in mothers and neonates in a Cameroonian labor ward
errAMERICAN JOURNAL OF INFECTION CONTROL
IF2.4
err2024-11-01
err1
PREAI
errNjeuna, Axelle; Founou, Luria Leslie; Founou, Raspail Carrel; Koudoum, Patrice Landry; Mbossi, Aurelia; Blocker, Ariel; Bentley, Stephen D.; Sone, Lucien Etame
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Impact of pneumococcal conjugate vaccines on invasive pneumococcal disease-causing lineages among South African children
errNATURE COMMUNICATIONS
IF15.7
err2024-09-27
err0
errOAAI
errLekhuleni, Cebile; Ndlangisa, Kedibone; Gladstone, Rebecca A.; Chochua, Sopio; Metcalf, Benjamin J.; Li, Yuan; Kleynhans, Jackie; de Gouveia, Linda; Hazelhurst, Scott; Ferreira, Ana D. S.; Skosana, Happy; Walaza, Sibongile; Quan, Vanessa; Meiring, Susan; Hawkins, Paulina A.; Mcgee, Lesley; Bentley, Stephen D.; Cohen, Cheryl; Lo, Stephanie W.; von Gottberg, Anne; du Plessis, Mignon
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Population genomics of Streptococcus mitis in UK and Ireland bloodstream infection and infective endocarditis cases
errNATURE COMMUNICATIONS
IF15.7
err2024-09-06
err0
errOAAI
errKalizang'oma, Akuzike; Richard, Damien; Kwambana-Adams, Brenda; Coelho, Juliana; Broughton, Karen; Pichon, Bruno; Hopkins, Katie L.; Chalker, Victoria; Beleza, Sandra; Bentley, Stephen D.; Chaguza, Chrispin; Heyderman, Robert S.
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Comparison of gene- by- gene and genome- wide short nucleotide sequence- based approaches to define the global population structure of Streptococcus pneumoniae
errMICROBIAL GENOMICS
IF4
err2024-08-28
err0
errOAAI
errKing, Alannah C.; Kumar, Narender; Mellor, Kate C.; Hawkins, Paulina A.; Mcgee, Lesley; Croucher, Nicholas J.; Bentley, Stephen D.; Lees, John A.; Lo, Stephanie W.
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Research Directions

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Co-authors
Cooperation Journals
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Jeremy Farrar
H-index: 141 · Papers: 772
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