Batuhan Çakır - Publications, H-index & Citations

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Batuhan Çakır

wellcome sanger institute

9H-index

21Paper Count

861Citation Count

Published Papers 6

Publication Date

A Hormone Cell Atlas maps the human endocrine system at cellular resolution

Science

IF45.8

2026-05-28

PREAI

Lijiang Fei; Isabel Huang-Doran; Katherine Lawler; Yizhou Yu; Jan Patrick Pett; Kevin M. Méndez-Acevedo; Dinesh Shah; Jaume Margalef-Rieres; Joseph S. Pohlman; Batuhan Cakir; Madelyn R. Moy; Robert G. Legg; Chuan Xu; Ken To; Duy Pham; Alexander V. Predeus; Ruth Hanssen; Tessa M. Cacciottolo; Rakesh K. Kapuge; Krzysztof Polanski; Amanda J. Oliver; Sarah A. Teichmann; I. Sadaf Farooqi

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Spatiotemporal cellular map of the developing human reproductive tract

Nature

IF48.5

2025-12-17

OAAI

Valentina Lorenzi; Cecilia Icoresi-Mazzeo; Charlotte Cassie; Nadav Yayon; Elias R. Ruiz-Morales; Carmen Sancho-Serra; Ryan Colligan; Frederick C. K. Wong; Magda Marečková; Elizabeth Tuck; Kenny Roberts; Tong Li; Marc-Antoine Jacques; James Ashcroft; Xiaoling He; Berta Crespo; Batuhan Cakir; Simon Murray; Yong Gu; Alexander V. Predeus; Martin Prete; Iva Kelava; Roger Barker; Luz Garcia-Alonso; John C. Marioni; Roser Vento-Tormo

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CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data

NUCLEIC ACIDS RESEARCH

IF13.1

2024-11-28

OAAI

Abdulla, Shibla; Aevermann, Brian; Assis, Pedro; Badajoz, Seve; Bell, Sidney M.; Bezzi, Emanuele; Cakir, Batuhan; Chaffer, Jim; Chambers, Signe; Cherry, J. Michael; Chi, Tiffany; Chien, Jennifer; Dorman, Leah; Garcia-Nieto, Pablo; Gloria, Nayib; Hastie, Mim; Hegeman, Daniel; Hilton, Jason; Huang, Timmy; Infeld, Amanda; Istrate, Ana-Maria; Jelic, Ivana; Katsuya, Kuni; Kim, Yang Joon; Liang, Karen; Lin, Mike; Lombardo, Maximilian; Marshall, Bailey; Martin, Bruce; Mcdade, Fran; Megill, Colin; Patel, Nikhil; Predeus, Alexander; Raymor, Brian; Robatmili, Behnam; Rogers, Dave; Rutherford, Erica; Sadgat, Dana; Shin, Andrew; Small, Corinn; Smith, Trent; Sridharan, Prathap; Tarashansky, Alexander; Tavares, Norbert; Thomas, Harley; Tolopko, Andrew; Urisko, Meghan; Yan, Joyce; Yeretssian, Garabet; Zamanian, Jennifer; Mani, Arathi; Cool, Jonah; Carr, Ambrose

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An organotypic atlas of human vascular cells

NATURE MEDICINE

IF50

2024-11-20

PREAI

Barnett, Sam N.; Cujba, Ana-Maria; Yang, Lu; Maceiras, Ana Raquel; Li, Shuang; Kedlian, Veronika R.; Pett, J. Patrick; Polanski, Krzysztof; Miranda, Antonio M. A.; Xu, Chuan; Cranley, James; Kanemaru, Kazumasa; Lee, Michael; Mach, Lukas; Perera, Shani; Tudor, Catherine; Joseph, Philomeena D.; Pritchard, Sophie; Toscano-Rivalta, Rebecca; Tuong, Zewen K.; Bolt, Liam; Petryszak, Robert; Prete, Martin; Cakir, Batuhan; Huseynov, Alik; Sarropoulos, Ioannis; Chowdhury, Rasheda A.; Elmentaite, Rasa; Madissoon, Elo; Oliver, Amanda J.; Campos, Lia; Brazovskaja, Agnieska; Gomes, Tomas; Treutlein, Barbara; Kim, Chang N.; Nowakowski, Tomasz J.; Meyer, Kerstin B.; Randi, Anna M.; Noseda, Michela; Teichmann, Sarah A.

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Author affiliations: a; bc; d; ef g h; i jnd k

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2024-01-02

OAAI

Ganier, Clarisse; Mazin, Pavel; Herrera-Oropeza, Gabriel; Du-Harpur, Xinyi; Blakeley, Matthew; Gabriel, Jeyrroy; Predeus, Alexander, V; Cakir, Batuhan; Prete, Martin; Harun, Nasrat; Darrigrand, Jean-Francois; Haiser, Alexander; Wyles, Saranya; Shaw, Tanya; Teichmann, Sarah A.; Haniffa, Muzlifah; Watt, Fiona M.; Lynch, Magnus D.

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Comparison of visualization tools for single-cell RNAseq data

genomics proteomics bioinformatics

IF2.8

2020-07-29

OAAI

Cakir, Batuhan; Prete, Martin; Huang, Ni; van Dongen, Stijn; Pir, Pinar; Kiselev, Vladimir Yu

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Research Directions