Not logged in An integrated One Health initiative for pathogen genomic surveillance in the UK Gupta, Yogesh K.; Adams, Ian; Van Aerle, Ronny; Avant, Justin; Bass, David; Batista, Frederico M.; Benucci, Marco; Briggs, Tiernan; Cano, Irene; Choudhury, Bhudipa; Crampton, Bridget; Ellis, Richard J.; Freimanis, Graham; Haynes, Edward; Hill, Sarah C.; Jones, Eleanor; Laurenson, Lynn; Maclaren, Alastair; Maskell, Dan; Olivieri, Leone; Paley, Richard; Pybus, Oliver G.; Raghwani, Jayna; Roberts, Helen; Ruba, Tahmina; Samal, Pankajini; Schilling, Mirjam; Subramaniam, Sunitha; Taylor, Neil; Ward, Georgia M.; Ward, Lisa Share Save
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Anthropogenic land consolidation intensifies zoonotic host diversity loss and disease transmission in human habitats Pei, Shan; Yu, Pengbo; Raghwani, Jayna; Wang, Yuxin; Liu, Ziyan; Li, Yidan; Cheng, Yanchao; Lin, Qiushi; Song, Chuliang; Dharmarajan, Guha; Faust, Christina L.; Tian, Yunyu; Xu, Yiting; Liang, Yilin; Qu, Jianhui; Wei, Jing; Li, Shen; Zhang, Tongjun; Ma, Chaofeng; Bharti, Nita; Cazelles, Bernard; Yang, Ruifu; Pybus, Oliver G.; Dobson, Andrew P.; Stenseth, Nils Chr.; Tian, Huaiyu Share Save
Routes of importation and spatial dynamics of SARS-CoV-2 variants during localized interventions in Chile Gutierrez, Bernardo; Tsui, Joseph L. -H; Pullano, Giulia; Mazzoli, Mattia; Gangavarapu, Karthik; Inward, Rhys P. D.; Bajaj, Sumali; Evans Pena, Rosario; Busch-Moreno, Simon; Suchard, Marc A.; Pybus, Oliver G.; Dunner, Alejandra; Puentes, Rodrigo; Ayala, Salvador; Fernandez, Jorge; Araos, Rafael; Ferres, Leo; Colizza, Vittoria; Kraemer, Moritz U. G. Share Save
Spatial scales of COVID-19 transmission in Mexico Klein, Brennan; Hartle, Harrison; Shrestha, Munik; Zenteno, Ana Cecilia; Cordera, David Barros Sierra; Nicolas-Carlock, Jose R.; Bento, Ana, I; Althouse, Benjamin M.; Gutierrez, Bernardo; Escalera-Zamudio, Marina; Reyes-Sandoval, Arturo; Pybus, Oliver G.; Vespignani, Alessandro; Diaz-Quinonez, Jose Alberto; Scarpino, Samuel, V; Kraemer, Moritz U. G. Share Save
Synchrony of Bird Migration with Global Dispersal of Avian Influenza Reveals Exposed Bird Orders Yang, Qiqi; Wang, Ben; Lemey, Phillipe; Dong, Lu; Mu, Tong; Wiebe, R. Alex; Guo, Fengyi; Trovao, Nidia Sequeira; Park, Sang Woo; Lewis, Nicola; Tsui, Joseph L. -H.; Bajaj, Sumali; Cheng, Yachang; Yang, Luojun; Haba, Yuki; Li, Bingying; Zhang, Guogang; Pybus, Oliver G.; Tian, Huaiyu; Grenfell, Bryan Share Save
Convergent trends and spatiotemporal patterns of Aedes-borne arboviruses in Mexico and Central America Gutierrez, Bernardo; Candido, Darlan da Silva; Bajaj, Sumali; Maldonado, Abril Paulina Rodriguez; Ayala, Fabiola Garces; Rodriguez, Maria de la Luz Torre; Rodriguez, Adnan Araiza; Arambula, Claudia Wong; Gonzalez, Ernesto Ramirez; Martinez, Irma Lopez; Diaz-Quinonez, Jose Alberto; Pichardo, Mauricio Vazquez; Hill, Sarah C.; Theze, Julien; Faria, Nuno R.; Pybus, Oliver G.; Preciado-Llanes, Lorena; Reyes-Sandoval, Arturo; Kraemer, Moritz U. G.; Escalera-Zamudio, Marina Share Save
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Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico Castelan-Sanchez, Hugo G.; Delaye, Luis; Inward, Rhys P. D.; Dellicour, Simon; Gutierrez, Bernardo; Martinez de la Vina, Natalia; Boukadida, Celia; Pybus, Oliver G.; de Anda Jauregui, Guillermo; Guzman, Plinio; Flores-Garrido, Marisol; Fontanelli, Oscar; Hernandez Rosales, Maribel; Meneses, Amilcar; Olmedo-Alvarez, Gabriela; Heriberto Herrera-Estrella, Alfredo; Sanchez-Flores, Alejandro; Esteban Munoz-Medina, Jose; Comas-Garcia, Andreu; Gomez-Gil, Bruno; Zarate, Selene; Taboada, Blanca; Lopez, Susana; Arias, Carlos F.; Kraemer, Moritz Ug; Lazcano, Antonio; Escalera Zamudio, Marina Share Save
Identification of Evolutionary Trajectories Shared across Human Betacoronaviruses Escalera-Zamudio, Marina; Pond, Sergei L. Kosakovsky; de la Vina, Natalia Martinez; Gutierrez, Bernardo; Inward, Rhys P. D.; Theze, Julien; van Dorp, Lucy; Castelan-Sanchez, Hugo G.; Bowden, Thomas A.; Pybus, Oliver G.; Hulswit, Ruben J. G. Share Save
Bidirectional Movement of Emerging H5N8 Avian Influenza Viruses Between Europe and Asia via Migratory Birds Since Early 2020 Zhang, Guogang; Li, Bingying; Raghwani, Jayna; Vrancken, Bram; Jia, Ru; Hill, Sarah C.; Fournie, Guillaume; Cheng, Yanchao; Yang, Qiqi; Wang, Yuxin; Wang, Zengmiao; Dong, Lu; Pybus, Oliver G.; Tian, Huaiyu Share Save
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Endogenous Viral Elements in Shrew Genomes Provide Insights into Pestivirus Ancient History Li, Yiqiao; Bletsa, Magda; Zisi, Zafeiro; Boonen, Ine; Gryseels, Sophie; Kafetzopoulou, Liana; Webster, Joanne P.; Catalano, Stefano; Pybus, Oliver G.; Van de Perre, Frederik; Li, Haotian; Li, Yaoyao; Li, Yuchun; Abramov, Alexei; Lymberakis, Petros; Lemey, Philippe; Lequime, Sebastian Share Save
Evolutionary features of a prolific subtype of avian influenza A virus in European waterfowl Wille, Michelle; Tolf, Conny; Latorre-Margalef, Neus; Fouchier, Ron A. M.; Halpin, Rebecca A.; Wentworth, David E.; Ragwani, Jayna; Pybus, Oliver G.; Olsen, Bjorn; Waldenstrom, Jonas Share Save
The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK Hill, Verity; Du Plessis, Louis; Peacock, Thomas P.; Aggarwal, Dinesh; Colquhoun, Rachel; Carabelli, Alesandro M.; Ellaby, Nicholas; Gallagher, Eileen; Groves, Natalie; Jackson, Ben; McCrone, J. T.; O'Toole, Aine; Price, Anna; Sanderson, Theo; Scher, Emily; Southgate, Joel; Volz, Erik; Barclay, Wendy S.; Barrett, Jeffrey C.; Chand, Meera; Connor, Thomas; Goodfellow, Ian; Gupta, Ravindra K.; Harrison, Ewan M.; Loman, Nicholas; Myers, Richard; Robertson, David L.; Pybus, Oliver G.; Rambaut, Andrew Share Save
Understanding Sabia virus infections (Brazilian mammarenavirus) Nastri, Ana Catharina; Duarte-Neto, Amaro Nunes; Casadio, Luciana Vilas Boas; Souza, William Marciel de; Claro, Ingra M.; Manuli, Erika R.; Selegatto, Gloria; Saloma, Matias C.; Fialkovitz, Gabriel; Taborda, Mariane; Almeida, Bianca Leal de; Magri, Marcello C.; Guedes, Ana Rubia; Neto, Laura Vieira Perdigao; Sataki, Fatima Mitie; Guimaraes, Thais; Mendes-Correa, Maria Cassia; Tozetto-Mendoza, Tania R.; Fumagalli, Marcilio Jorge; Ho, Yeh-Li; Silva, Camila ALves Maia da; Coletti, Thais M.; Jesus, Jacqueline Goes de; Romano, Camila M.; Hill, Sarah C.; Pybus, Oliver; Pinho, Joao Renato Rebello; Ledesma, Felipe Lourenco; Casal, Yuri R.; Kanamura, Cristina; Araujo, Leonardo Jose Tadeu de; Ferreira, Camila Santos da Silva; Guerra, Juliana Mariotti; Figueiredo, Luiz Tadeu Moraes; Dolhnikoff, Marisa; Faria, Nuno R.; Sabino, Ester C.; Avancini, Venacio; Alves, Ferreira; Levin, Anna S. Share Save
Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa Tegally, Houriiyah; Moir, Monika; Everatt, Josie; Giovanetti, Marta; Scheepers, Cathrine; Wilkinson, Eduan; Subramoney, Kathleen; Makatini, Zinhle; Moyo, Sikhulile; Amoako, Daniel G.; Baxter, Cheryl; Althaus, Christian L.; Anyaneji, Ugochukwu J.; Kekana, Dikeledi; Viana, Raquel; Giandhari, Jennifer; Lessells, Richard J.; Maponga, Tongai; Maruapula, Dorcas; Choga, Wonderful; Matshaba, Mogomotsi; Mbulawa, Mpaphi B.; Msomi, Nokukhanya; Naidoo, Yeshnee; Pillay, Sureshnee; Sanko, Tomasz Janusz; San, James E.; Scott, Lesley; Singh, Lavanya; Magini, Nonkululeko A.; Smith-Lawrence, Pamela; Stevens, Wendy; Dor, Graeme; Tshiabuila, Derek; Wolter, Nicole; Preiser, Wolfgang; Treurnicht, Florette K.; Venter, Marietjie; Chiloane, Georginah; McIntyre, Caitlyn; O'Toole, Aine; Ruis, Christopher; Peacock, Thomas P.; Roemer, Cornelius; Kosakovsky Pond, Sergei L.; Williamson, Carolyn; Pybus, Oliver G.; Bhiman, Jinal N.; Glass, Allison; Martin, Darren P.; Jackson, Ben; Rambaut, Andrew; Laguda-Akingba, Oluwakemi; Gaseitsiwe, Simani; von Gottberg, Anne; de Oliveira, Tulio; Bester, Armand Phillip; Claassen, Mathilda; Doolabh, Deelan; Mudau, Innocent; Mbhele, Nokuzola; Engelbrecht, Susan; Goedhals, Dominique; Hardie, Diana; Hsiao, Nei-Yuan; Iranzadeh, Arash; Ismail, Arshad; Joseph, Rageema; Maharaj, Arisha; Mahlangu, Boitshoko; Mahlakwane, Kamela; Davis, Ashlyn; Marais, Gert; Mlisana, Koleka; Mnguni, Anele; Mohale, Thabo; Motsatsi, Gerald; Mwangi, Peter; Ntuli, Noxolo; Nyaga, Martin; Olubayo, Luicer; Radibe, Botshelo; Ramphal, Yajna; Ramphal, Upasana; Strasheim, Wilhelmina; Tebeila, Naume; van Wyk, Stephanie; Wilson, Shannon; Lucaci, Alexander G.; Weaver, Steven; Maharaj, Akhil; Pillay, Yusasha; Davids, Michaela; Mendes, Adriano; Mayaphi, Simnikiwe Share Save
Molecular and genomic investigation of an urban outbreak of dengue virus serotype 2 in Angola, 2017-2019 Neto, Zoraima; Martinez, Pedro A.; Hill, Sarah C.; Jandondo, Domingos; Theze, Julien; Mirandela, Marinela; Aguiar, Renato Santana; Xavier, Joilson; Sebastiao, Cruz dos Santos; Candido, Ana Luisa Micolo; Vaz, Filipa; Castro, Gisel Reyes; Paixao, Joana Paula; Loman, Nicholas J.; Lemey, Philippe; Pybus, Oliver G.; Vasconcelos, Jocelyne; Faria, Nuno Rodrigues; de Morais, Joana Share Save
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