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J

Jens Nielsen

chalmers university of technology

161H-index
1.5KPaper Count
12.3WCitation Count
Published Papers 638
Publication Date
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Enabling sustainable supply of the essential cancer medicines etoposide and teniposide in yeast
errScience
IF45.8
err2026-07-30
err0
PREAI
errSiyu Shen; Xue Hu; Dan Li; Yuru Tong; Yunpeng Lv; Zhenjiang Tian; Jiadian Wang; Hao Tang; Yapeng Wang; Lan Kang; Jens Nielsen; Luqi Huang; Yating Hu
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errSave
AlphaGEM enables precise genome-scale metabolic modelling by integrating protein structure alignment with deep-learning-based dark metabolism mining
errNature Communications
IF15.7
err2026-07-16
err0
errOAAI
errWeishang Han; Luchi Xiao; Haocheng Sun; Guangming Xiang; Qianxi Jia; Haoyu Wang; Boyang Ji; Cheng Zhang; Eduard J. Kerkhoven; Jens Nielsen; Hongzhong Lu
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errSave
Systematically exploring yeast metabolism through retrobiosynthesis and deep learning
errNature Catalysis
IF44.6
err2026-04-06
err0
PREAI
errKe Wu; Haohao Liu; Yao Zhou; Manda Sun; Runze Mao; Yindi Jiang; Eduard J. Kerkhoven; Yu Chen; Jens Nielsen; Hongting Tang; Feiran Li
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errSave
Toward unbiased objective functions in constraint-based modeling
errTrends in Biotechnology
IF14.9
err2026-03-11
err0
PREAI
errWeihang Dong; Jens Nielsen; Haiyan Li; Feiran Li; Yu Chen
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errSave
A gut microbiome-kidney-heart axis predictive of future cardiovascular diseases
errNature Communications
IF15.7
err2026-03-05
err0
errOAAI
errKanta Chechi; Rima Chakaroun; Antonis Myridakis; Sofia K. Forslund-Startceva; Sebastien Fromentin; Trine Nielsen; Judith Aron-Wisneswky; Eugeni Belda; Edi Prifti; Pierre Bel Lassen; Gwen Falony; Sara Vieira-Silva; Julien Chilloux; Kazuhiro Sonomura; Lesley Hoyles; Laura Martinez-Gili; Francesco Pallotti; Petros Andrikopoulos; Francesc Puig-Castellví; Romina Pacheco Tapia; Inés Castro-Dionicio; Hugo Roume; Nicolas Pons; Emmanuelle Le Chatelier; Benoit Quinquis; Nathalie Galleron; Magali Berland; Michael T. Olanipekun; Manyi Jia; Angelos Manolias; Bridget Holmes; Solia Adriouch; Matthias Blüher; Luis Pedro Coelho; Kévin Da Silva; Pilar Galan; Boyang Ji; Ana Luisa Neves; Christine Rouault; Joe-Elie Salem; Valentina Tremaroli; Tue H. Hansen; Nadja B. Søndertoft; Christian Lewinter; Helle K. Pedersen; Peter D. Mark; Jens P. Goetze; Lars Køber; Henrik Vestergaard; Torben Hansen; Jean-Daniel Zucker; Taka-Aki Sato; Serge Hercberg; Fredrik Bäckhed; Ivica Letunic; Jean-Michel Oppert; Jens Nielsen; Jeroen Raes; Ioanna Tzoulaki; Abbas Dehghan; Verena Zuber; Emmanuelle Bouzigon; Mark Lathrop; Parminder Raina; Philippe Froguel; Fumihiko Matsuda; Florence Demenais; Dominique Gauguier; Michael Stumvoll; Peer Bork; Oluf Pedersen; S. Dusko Ehrlich; Karine Clément; Marc-Emmanuel Dumas
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errSave
The Power of Yeast
errYeast
IF2.6
err2025-12-01
err0
errOAAI
errNielsen, Jens
errShare
errSave
Engineering metabolism of Saccharomyces cerevisiae for production of chemicals
errCurrent Opinion in Biotechnology
IF7
err2025-11-18
err0
PREAI
errYi Yu; Xiaoying Fu; Jinmiao Hu; Jens Nielsen; Shuobo Shi
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errSave
Human presence in extreme environments as a condition of knowledge: an Epistemological inquiry
errFrontiers in Virtual Reality
IF3.6
err2025-10-23
err0
errOAAI
errJ. N. Nielsen
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errSave
Chemical engineering: a root of systems biology and its impacts on biology, biotechnology, and medicine
errFrontiers of Chemical Science and Engineering
IF4.5
err2025-07-17
err0
errOAAI
errJens Nielsen
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errSave
The role of metabolism in shaping enzyme structures over 400 million years
errNature
IF48.5
err2025-07-09
err0
errOAAI
errOliver Lemke; Benjamin Murray Heineike; Sandra Viknander; Nir Cohen; Feiran Li; Jacob Lucas Steenwyk; Leonard Spranger; Federica Agostini; Cory Thomas Lee; Simran Kaur Aulakh; Judith Berman; Antonis Rokas; Jens Nielsen; Toni Ingolf Gossmann; Aleksej Zelezniak; Markus Ralser
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errSave
The molecular landscape of cellular metal ion biology
errCell Systems
IF7.7
err2025-06-13
err0
errOAAI
errSimran Kaur Aulakh; Oliver Lemke; Lukasz Szyrwiel; Stephan Kamrad; Yu Chen; Johannes Hartl; Michael Mülleder; Jens Nielsen; Markus Ralser
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errSave
Extensively acquired antimicrobial-resistant bacteria restructure the individual microbial community in post-antibiotic conditions
errNPJ BIOFILMS AND MICROBIOMES
IF9.2
err2025-05-14
err0
errOAAI
errBaek, Jae Woo; Lim, Songwon; Park, Nayeon; Song, Byeongsop; Kirtipal, Nikhil; Nielsen, Jens; Mardinoglu, Adil; Shoaie, Saeed; Kim, Jae-il; Son, Jang Won; Koh, Ara; Lee, Sunjae
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errSave
ChIP-exo and CRISPRi/a illuminate the role of Pdr1 and Yap1 in acetic acid tolerance in Saccharomyces cerevisiae
errAPPLIED AND ENVIRONMENTAL MICROBIOLOGY
IF3.7
err2025-03-01
err0
errOAAI
errLenitz, Ibai; Borlin, Christoph; Pianale, Luca Torello; Balachandran, Darshan; Nielsen, Jens; David, Florian; Siewers, Verena; Nygard, Yvonne
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errSave
Personalized gut microbial community modeling by leveraging genome-scale metabolic models and metagenomics
errCURRENT OPINION IN BIOTECHNOLOGY
IF7
err2025-02-01
err0
PREAI
errLi, Longtao; Nielsen, Jens; Chen, Yu
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errSave
Multi-omics characterization of improved cognitive functions in Parkinson's disease patients after the combined metabolic activator treatment: a randomized, double-blinded, placebo-controlled phase II trial
errBRAIN COMMUNICATIONS
IF4.5
err2025-01-06
err0
errOAAI
errYulug, Burak; Altay, Ozlem; Li, Xiangyu; Hanoglu, Lutfu; Cankaya, Seyda; Velioglu, Halil A.; Lam, Simon; Yang, Hong; Coskun, Ebru; Idil, Ezgi; Bayraktaroglu, Zubeyir; Nogaylar, Rahim; Ozsimsek, Ahmet; Yildirim, Serkan; Bolat, Ismail; Kiliclioglu, Metin; Bayram, Cemil; Yuksel, Nursena; Tozlu, Ozlem O.; Arif, Muhammad; Shoaie, Saeed; Hacimuftuoglu, Ahmet; Zhang, Cheng; Nielsen, Jens; Turkez, Hasan; Boren, Jan; Uhlen, Mathias; Mardinoglu, Adil
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errSave
Extending the G1 phase improves the production of lipophilic compounds in yeast by boosting enzyme expression and increasing cell size
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2024-11-13
err1
errOAAI
errHao, He; Yao, Mingdong; Wang, Ying; Zhang, Chenglong; Liu, Zihe; Nielsen, Jens; Shi, Shuobo; Xiao, Wenhai; Yuan, Yingjin
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errSave
TRYing to evaluate production costs in microbial biotechnology
errTRENDS IN BIOTECHNOLOGY
IF14.9
err2024-11-01
err5
errOAAI
errKonzock, Oliver; Nielsen, Jens
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errSave
De novo production of protoberberine and benzophenanthridine alkaloids through metabolic engineering of yeast
errNATURE COMMUNICATIONS
IF15.7
err2024-10-09
err0
errOAAI
errJiao, Xiang; Fu, Xiaozhi; Li, Qishuang; Bu, Junling; Liu, Xiuyu; Savolainen, Otto; Huang, Luqi; Guo, Juan; Nielsen, Jens; Chen, Yun
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errSave
Multi-omics analysis reveals the key factors involved in the severity of the Alzheimer's disease
errALZHEIMERS RESEARCH & THERAPY
IF7.6
err2024-10-02
err1
errOAAI
errMeng, Lingqi; Jin, Han; Yulug, Burak; Altay, Ozlem; Li, Xiangyu; Hanoglu, Lutfu; Cankaya, Seyda; Coskun, Ebru; Idil, Ezgi; Nogaylar, Rahim; Ozsimsek, Ahmet; Shoaie, Saeed; Turkez, Hasan; Nielsen, Jens; Zhang, Cheng; Boren, Jan; Uhlen, Mathias; Mardinoglu, Adil
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errSave
Urinary Free Glycosaminoglycans Identify Adults at High Risk of Developing Early-stage High-grade Bladder Cancer
errEUROPEAN UROLOGY OPEN SCIENCE
IF4.5
err2024-10-01
err0
errOAAI
errGatto, Francesco; Bratulic, Sinisa; Maccari, Franesca; Galeotti, Fabio; Volpi, Nicola; Nielsen, Jens; Lotan, Yair; Kjolhede, Henrik
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Research Directions

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Co-authors
Cooperation Journals
L
Lewis C. Cantley
H-index: 214 · Papers: 1.4K
R
Rakesh K. Jain
H-index: 200 · Papers: 1.7K
T
Todd R. Golub
H-index: 176 · Papers: 749
B
Bernard Henrissat
H-index: 170 · Papers: 1.1K
B
Bernhard Ø. Palsson
H-index: 166 · Papers: 1.2K
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