Not logged in Dynamics and ecology of a multistage expansion of Oropouche virus in Brazil Tegally, Houriiyah; Dellicour, Simon; Poongavanan, Jenicca; Mavian, Carla; Dor, Graeme; Fonseca, Vagner; Tagliamonte, Massimiliano S.; Dunaiski, Marcel; Moir, Monika; Wilkinson, Eduan; Campelo de Albuquerque, Carlos Frederico; Frutuoso, Livia C. V.; Holmes, Edward C.; Baxter, Cheryl; Lessells, Richard; Kraemer, Moritz U. G.; Lourenco, Jose; Alcantara, Luiz Carlos Junior; de Oliveira, Tulio; Giovanetti, Marta Share Save
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Emergence of the BA.2.87.1 lineage of SARS-CoV-2 in South Africa, a highly diverged BA.2-related lineage Kekana, Dikeledi; Ntozini, Buhle; Hisner, Ryan; Yousif, Mukhlid; Ntuli, Phindile; Ndlovu, Nkosenhle; McCarthy, Kerrigan; Mnguni, Anele; Mahlangu, Boitshoko; Nzimande, Ayanda; Stock, Nadine; Tegally, Houriiyah; Davis, Mary-Ann; Moir, Monika; Wilkinson, Eduan; Baxter, Cheryl; Bhiman, Jinal; Cohen, Cheryl; Walaza, Sibongile; Von Gottberg, Anne; De Oliveira, Tulio; Wolter, Nicole; Martin, Darren Share Save
Emergence of Omicron FN.1 a descendent of BQ.1.1 in Botswana Choga, Wonderful T.; Gustani-Buss, Emanuele; Tegally, Houriiyah; Maruapula, Dorcas; Yu, Xiaoyu; Moir, Monika; Zuze, Boitumelo J. L.; James, San Emmanuel; Ndlovu, Nokuthula S.; Seru, Kedumetse; Motshosi, Patience; Blenkinsop, Alexandra; Gobe, Irene; Baxter, Cheryl; Manasa, Justen; Lockman, Shahin; Shapiro, Roger; Makhema, Joseph; Wilkinson, Eduan; Blackard, Jason T.; Lemey, Phillipe; Lessells, Richard J.; Martin, Darren P.; de Oliveira, Tulio; Gaseitsiwe, Simani; Moyo, Sikhulile Share Save
Impacts of climate change-related human migration on infectious diseases Tsui, Joseph L. -H.; Pena, Rosario Evans; Moir, Monika; Inward, Rhys P. D.; Wilkinson, Eduan; San, James Emmanuel; Poongavanan, Jenicca; Bajaj, Sumali; Gutierrez, Bernardo; Dasgupta, Abhishek; de Oliveira, Tulio; Kraemer, Moritz U. G.; Tegally, Houriiyah; Sambaturu, Prathyush Share Save
SARS-CoV-2 infection in immunosuppression evolves sub-lineages which independently accumulate neutralization escape mutations Lustig, Gila; Ganga, Yashica; Rodel, Hylton E.; Tegally, Houriiyah; Khairallah, Afrah; Jackson, Laurelle; Cele, Sandile; Khan, Khadija; Jule, Zesuliwe; Reedoy, Kajal; Karim, Farina; Bernstein, Mallory; Ndung'u, Thumbi; Moosa, Mahomed-Yunus S.; Archary, Derseree; de Oliveira, Tulio; Lessells, Richard; Neher, Richard A.; Karim, Salim S. Abdool; Sigal, Alex Share Save
Insights into SARS-CoV-2 in Angola during the COVID-19 peak: Molecular epidemiology and genome surveillance Francisco, Ngiambudulu M.; van Wyk, Stephanie; Moir, Monika; San, James Emmanuel; Sebastiao, Cruz S.; Tegally, Houriiyah; Xavier, Joicymara; Maharaj, Akhil; Neto, Zoraima; Afonso, Pedro; Jandondo, Domingos; Paixao, Joana; Miranda, Julio; David, Kumbelembe; Ingles, Luzia; Pereira, Amilton; Paulo, Agostinho; Carralero, Raisa Rivas; Freitas, Helga Reis; Mufinda, Franco; Lutucuta, Silvia; Ghafari, Mahan; Giovanetti, Marta; Giandhari, Jennifer; Pillay, Sureshnee; Naidoo, Yeshnee; Singh, Lavanya; Tshiabuila, Derek; Martin, Darren Patrick; Chabuka, Lucious; Choga, Wonderful; Wanjohi, Dorcas; Mwangi, Sarah; Pillay, Yusasha; Kebede, Yenew; Shumba, Edwin; Ondoa, Pascale; Baxter, Cheryl; Wilkinson, Eduan; Tessema, Sofonias Kifle; Katzourakis, Aris; Lessells, Richard; de Oliveira, Tulio; Morais, Joana Share Save
Rapid Epidemic Expansion of Chikungunya Virus East/Central/South African Lineage, Paraguay Giovanetti, Marta; Vazquez, Cynthia; Lima, Mauricio; Castro, Emerson; Rojas, Analia; Fuente, Andrea Gomez de la; Aquino, Carolina; Cantero, Cesar; Fleitas, Fatima; Torales, Juan; Barrios, Julio; Ortega, Maria J.; Gamarra, Maria L.; Villalba, Shirley; Alfonzo, Tania; Xavier, Joilson; Adelino, Talita; Fritsch, Hegger; Iani, Felipe C. M.; Pereira, Glauco C.; de Oliveira, Carla; Schuab, Gabriel; Rodrigues, Evandra S.; Kashima, Simone; Leite, Juliana; Gresh, Lionel; Franco, Leticia; Tegally, Houriiyah; Voorhis, Wesley C. Van; Lessels, Richard; Filippis, Ana Maria Bispo de; Ojeda, Andrea; Sequera, Guillermo; Montoya, Romeo; Holmes, Edward C.; de Oliveira, Tulio; Rico, Jairo M.; Lourenco, Jose; Fonseca, Vagner; Alcantara, Luiz C. J. Share Save
Molecular Epidemiology of SARS-CoV-2 during Five COVID-19 Waves and the Significance of Low-Frequency Lineages (vol 15, 1194, 2023) Subramoney, Kathleen; Mtileni, Nkhensani; Giandhari, Jennifer; Naidoo, Yeshnee; Ramphal, Yajna; Pillay, Sureshnee; Ramphal, Upasana; Maharaj, Akhil; Tshiabuila, Derek; Tegally, Houriiyah; Wilkinson, Eduan; de Oliveira, Tulio; Fielding, Burtram C.; Treurnicht, Florette K. Share Save
Molecular Epidemiology of SARS-CoV-2 during Five COVID-19 Waves and the Significance of Low-Frequency Lineages Subramoney, Kathleen; Mtileni, Nkhensani; Giandhari, Jennifer; Naidoo, Yeshnee; Ramphal, Yajna; Pillay, Sureshnee; Ramphal, Upasana; Maharaj, Akhil; Tshiabuila, Derek; Tegally, Houriiyah; Wilkinson, Eduan; de Oliveira, Tulio; Fielding, Burtram C.; Treurnicht, Florette K. Share Save
Reply to Molldrem Maponga, Tongai G.; Jeffries, Montenique; Tegally, Houriiyah; Sutherland, Andrew; Wilkinson, Eduan; Lessells, Richard J.; Msomi, Nokukhanya; van Zyl, Gert; de Oliveira, Tulio; Preiser, Wolfgang Share Save
Global disparities in SARS-CoV-2 genomic surveillance Brito, Anderson F.; Semenova, Elizaveta; Dudas, Gytis; Hassler, Gabriel W.; Kalinich, Chaney C.; Kraemer, Moritz U. G.; Ho, Joses; Tegally, Houriiyah; Githinji, George; Agoti, Charles N.; Matkin, Lucy E.; Whittaker, Charles; Howden, Benjamin P.; Sintchenko, Vitali; Zuckerman, Neta S.; Mor, Orna; Blankenship, Heather M.; de Oliveira, Tulio; Lin, Raymond T. P.; Siqueira, Marilda Mendonca; Resende, Paola Cristina; Vasconcelos, Ana Tereza R.; Spilki, Fernando R.; Aguiar, Renato Santana; Alexiev, Ivailo; Ivanov, Ivan N.; Philipova, Ivva; Carrington, Christine V. F.; Sahadeo, Nikita S. D.; Gurry, Celine; Maurer-Stroh, Sebastian; Naidoo, Dhamari; von Eije, Karin J.; Perkins, Mark D.; van Kerkhove, Maria; Hill, Sarah C.; Sabino, Ester C.; Pybus, Oliver G.; Dye, Christopher; Bhatt, Samir; Flaxman, Seth; Suchard, Marc A.; Grubaugh, Nathan D.; Baele, Guy; Faria, Nuno R. Share Save
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Omicron BA.4/BA.5 escape neutralizing immunity elicited by BA.1 infection (vol 608, pg 593, 2022) Khan, Khadija; Karim, Farina; Ganga, Yashica; Bernstein, Mallory; Jule, Zesuliwe; Reedoy, Kajal; Cele, Sandile; Lustig, Gila; Amoako, Daniel; Wolter, Nicole; Samsunder, Natasha; Sivro, Aida; San, James Emmanuel; Giandhari, Jennifer; Tegally, Houriiyah; Pillay, Sureshnee; Naidoo, Yeshnee; Mazibuko, Matilda; Miya, Yoliswa; Ngcobo, Nokuthula; Manickchund, Nithendra; Magula, Nombulelo; Karim, Quarraisha Abdool; von Gottberg, Anne; Abdool Karim, Salim S.; Hanekom, Willem; Gosnell, Bernadett I.; Lessells, Richard J.; de Oliveira, Tulio; Moosa, Mahomed-Yunus S.; Sigal, Alex Share Save
SARS-CoV-2 Genetic Diversity and Lineage Dynamics in Egypt during the First 18 Months of the Pandemic Roshdy, Wael H.; Khalifa, Mohamed K.; San, James Emmanuel; Tegally, Houriiyah; Wilkinson, Eduan; Showky, Shymaa; Martin, Darren Patrick; Moir, Monika; Naguib, Amel; Elguindy, Nancy; Gomaa, Mokhtar R.; Fahim, Manal; Abu Elsood, Hanaa; Mohsen, Amira; Galal, Ramy; Hassany, Mohamed; Lessells, Richard J.; Al-Karmalawy, Ahmed A.; EL-Shesheny, Rabeh; Kandeil, Ahmed M.; Ali, Mohamed A.; de Oliveira, Tulio Share Save
Omicron BA.4/BA.5 escape neutralizing immunity elicited by BA.1 infection Khan, Khadija; Karim, Farina; Ganga, Yashica; Bernstein, Mallory; Jule, Zesuliwe; Reedoy, Kajal; Cele, Sandile; Lustig, Gila; Amoako, Daniel; Wolter, Nicole; Samsunder, Natasha; Sivro, Aida; San, James Emmanuel; Giandhari, Jennifer; Tegally, Houriiyah; Pillay, Sureshnee; Naidoo, Yeshnee; Mazibuko, Matilda; Miya, Yoliswa; Ngcobo, Nokuthula; Manickchund, Nithendra; Magula, Nombulelo; Karim, Quarraisha Abdool; von Gottberg, Anne; Karim, Salim S. Abdool; Hanekom, Willem; Gosnell, Bernadett, I; Lessells, Richard J.; de Oliveira, Tulio; Moosa, Mahomed-Yunus S.; Sigal, Alex Share Save
Persistent Severe Acute Respiratory Syndrome Coronavirus 2 Infection With accumulation of mutations in a patient with poorly controlled Human Immunodeficiency Virus infection Maponga, Tongai G.; Jeffries, Montenique; Tegally, Houriiyah; Sutherland, Andrew; Wilkinson, Eduan; Lessells, Richard J.; Msomi, Nokukhanya; van Zyl, Gert; de Oliveira, Tulio; Preiser, Wolfgang Share Save
Tracking the 2022 monkeypox outbreak with epidemiological data in real-time Kraemer, Moritz U. G.; Tegally, Houriiyah; Pigott, David M.; Dasgupta, Abhishek; Sheldon, James; Wilkinson, Eduan; Schultheiss, Marinanicole; Han, Aimee; Oglia, Mark; Marks, Spencer; Kanner, Joshua; O'Brien, Katelynn; Dandamudi, Sudheer; Rader, Benjamin; Sewalk, Kara; Bento, Ana, I; Scarpino, Samuel, V; de Oliveira, Tulio; Bogoch, Isaac I.; Katz, Rebecca; Brownstein, John S. Share Save
Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa Tegally, Houriiyah; Moir, Monika; Everatt, Josie; Giovanetti, Marta; Scheepers, Cathrine; Wilkinson, Eduan; Subramoney, Kathleen; Makatini, Zinhle; Moyo, Sikhulile; Amoako, Daniel G.; Baxter, Cheryl; Althaus, Christian L.; Anyaneji, Ugochukwu J.; Kekana, Dikeledi; Viana, Raquel; Giandhari, Jennifer; Lessells, Richard J.; Maponga, Tongai; Maruapula, Dorcas; Choga, Wonderful; Matshaba, Mogomotsi; Mbulawa, Mpaphi B.; Msomi, Nokukhanya; Naidoo, Yeshnee; Pillay, Sureshnee; Sanko, Tomasz Janusz; San, James E.; Scott, Lesley; Singh, Lavanya; Magini, Nonkululeko A.; Smith-Lawrence, Pamela; Stevens, Wendy; Dor, Graeme; Tshiabuila, Derek; Wolter, Nicole; Preiser, Wolfgang; Treurnicht, Florette K.; Venter, Marietjie; Chiloane, Georginah; McIntyre, Caitlyn; O'Toole, Aine; Ruis, Christopher; Peacock, Thomas P.; Roemer, Cornelius; Kosakovsky Pond, Sergei L.; Williamson, Carolyn; Pybus, Oliver G.; Bhiman, Jinal N.; Glass, Allison; Martin, Darren P.; Jackson, Ben; Rambaut, Andrew; Laguda-Akingba, Oluwakemi; Gaseitsiwe, Simani; von Gottberg, Anne; de Oliveira, Tulio; Bester, Armand Phillip; Claassen, Mathilda; Doolabh, Deelan; Mudau, Innocent; Mbhele, Nokuzola; Engelbrecht, Susan; Goedhals, Dominique; Hardie, Diana; Hsiao, Nei-Yuan; Iranzadeh, Arash; Ismail, Arshad; Joseph, Rageema; Maharaj, Arisha; Mahlangu, Boitshoko; Mahlakwane, Kamela; Davis, Ashlyn; Marais, Gert; Mlisana, Koleka; Mnguni, Anele; Mohale, Thabo; Motsatsi, Gerald; Mwangi, Peter; Ntuli, Noxolo; Nyaga, Martin; Olubayo, Luicer; Radibe, Botshelo; Ramphal, Yajna; Ramphal, Upasana; Strasheim, Wilhelmina; Tebeila, Naume; van Wyk, Stephanie; Wilson, Shannon; Lucaci, Alexander G.; Weaver, Steven; Maharaj, Akhil; Pillay, Yusasha; Davids, Michaela; Mendes, Adriano; Mayaphi, Simnikiwe Share Save
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