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Todd M. Allen

harvard university medical affiliates

92H-index
393Paper Count
2.6WCitation Count
Published Papers 178
Publication Date
Genomic surveillance uncovers regional variation in HCV transmission networks in rural United States
err2025-12-02
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errOAAI
errDamien C. Tully; David J. Bean; Jacklyn Sarette; Thang Long Ngo; Karen A. Power; Daniel Brook; Hannah Cooper; Judith Feinberg; Peter D. Friedmann; Karli R. Hochstatter; Jennifer R. Havens; Shanna Babalonis; Christopher Hurt; Wiley Jenkins; P. Todd Korthuis; William Miller; Mai T. Pho; Gordon Smith; Thomas J. Stopka; Judith I. Tsui; L. Sarah Mixson; Ryan P. Westergaard; April M. Young; Todd M. Allen
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Immunosuppressant therapy averts rejection of allogeneic FKBP1A-disrupted CAR-T cells
err2024-10-01
err1
errOAAI
errMaldini, Colby R.; Messana, Angelica C.; Bendet, Paula B.; Camblin, Adam J.; Musenge, Faith M.; White, Moriah L.; Rocha, Joseph J.; Coholan, Lindsey J.; Karaca, Cisem; Li, Frederick; Yan, Bo; Vrbanac, Vladimir D.; Marte, Emily; Claiborne, Daniel T.; Boutwell, Christian L.; Allen, Todd M.
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A VRC13-like bNAb response is associated with complex escape pathways in HIV-1 envelope
err2024-03-19
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errOAAI
errJoshi, Vinita R.; Claiborne, Daniel T.; Pack, Melissa L.; Power, Karen A.; Newman, Ruchi M.; Batorsky, Rebecca; Bean, David J.; Goroff, Matthew S.; Lingwood, Daniel; Seaman, Michael S.; Rosenberg, Eric; Allen, Todd M.
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The Rural Opioid Initiative Consortium description: providing evidence to Understand the Fourth Wave of the Opioid Crisis
err2022-07-26
err47
errOAAI
errJenkins, Richard A.; Whitney, Bridget M.; Nance, Robin M.; Allen, Todd M.; Cooper, Hannah L. F.; Feinberg, Judith; Fredericksen, Rob; Friedmann, Peter D.; Go, Vivian F.; Jenkins, Wiley D.; Korthuis, P. Todd; Miller, William C.; Pho, Mai T.; Rudolph, Abby E.; Seal, David W.; Smith, Gordon S.; Stopka, Thomas J.; Westergaard, Ryan P.; Young, April M.; Zule, William A.; Delaney, Joseph A. C.; Tsui, Judith, I; Crane, Heidi M.
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Functional impairment of HIV-specific CD8+T cells precedes aborted spontaneous control of viremia
errIMMUNITY
IF26.3
err2021-10-01
err28
errOAAI
errCollins, David R.; Urbach, Jonathan M.; Racenet, Zachary J.; Arshad, Umar; Power, Karen A.; Newman, Ruchi M.; Mylvaganam, Geetha H.; Ly, Ngoc L.; Lian, Xiaodong; Rull, Anna; Rassadkina, Yelizaveta; Yanez, Adrienne G.; Peluso, Michael J.; Deeks, Steven G.; Vidal, Francesc; Lichterfeld, Mathias; Yu, Xu G.; Gaiha, Gaurav D.; Allen, Todd M.; Walker, Bruce D.
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Identification of Genetically Related HCV Infections Among Self-Described Injecting Partnerships
err2021-08-27
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errOAAI
errTully, Damien C.; Hahn, Judith A.; Bean, David J.; Evans, Jennifer L.; Morris, Meghan D.; Page, Kimberly; Allen, Todd M.
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Differentiation of exhausted CD8+ T cells after termination of chronic antigen stimulation stops short of achieving functional T cell memory
err2021-07-26
err67
errOAAI
errTonnerre, Pierre; Wolski, David; Subudhi, Sonu; Al-Jabban, Jihad; Hoogeveen, Ruben C.; Damasio, Marcos; Drescher, Hannah K.; Bartsch, Lea M.; Tully, Damien C.; Sen, Debattama R.; Bean, David J.; Brown, Joelle; Torres-Cornejo, Almudena; Robidoux, Maxwell; Kvistad, Daniel; Alatrakchi, Nadia; Cui, Ang; Lieb, David; Cheney, James A.; Gustafson, Jenna; Lewis-Ximenez, Lia L.; Massenet-Regad, Lucile; Eisenhaure, Thomas; Aneja, Jasneet; Haining, W. Nicholas; Chung, Raymond T.; Hacohen, Nir; Allen, Todd M.; Kim, Arthur Y.; Lauer, Georg M.
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Epigenetic scars of CD8+ T cell exhaustion persist after cure of chronic infection in humans
err2021-07-26
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errOAAI
errYates, Kathleen B.; Tonnerre, Pierre; Martin, Genevieve E.; Gerdemann, Ulrike; Al Abosy, Rose; Comstock, Dawn E.; Weiss, Sarah A.; Wolski, David; Tully, Damien C.; Chung, Raymond T.; Allen, Todd M.; Kim, Arthur Y.; Fidler, Sarah; Fox, Julie; Frater, John; Lauer, Georg M.; Haining, W. Nicholas; Sen, Debattama R.
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Innate Immune Reconstitution in Humanized Bone Marrow-Liver-Thymus (HuBLT) Mice Governs Adaptive Cellular Immune Function and Responses to HIV-1 Infection
err2021-05-26
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errGarcia-Beltran, Wilfredo F.; Claiborne, Daniel T.; Maldini, Colby R.; Phelps, Meredith; Vrbanac, Vladimir; Karpel, Marshall E.; Krupp, Katharine L.; Power, Karen A.; Boutwell, Christian L.; Balazs, Alejandro B.; Tager, Andrew M.; Altfeld, Marcus; Allen, Todd M.
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Hepatitis C Virus Transmission Clusters in Public Health and Correctional Settings, Wisconsin, USA, 2016-2017
err2021-02-01
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errOAAI
errHochstatter, Karli R.; Tully, Damien C.; Power, Karen A.; Koepke, Ruth; Akhtar, Wajiha Z.; Prieve, Audrey F.; Whyte, Thomas; Bean, David J.; Seal, David W.; Allen, Todd M.; Westergaard, Ryan P.
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HIV Antibody Fc N-Linked Glycosylation Is Associated with Viral Rebound
err2020-12-01
err19
errOAAI
errOffersen, Rasmus; Yu, Wen-Han; Scully, Eileen P.; Julg, Boris; Euler, Zelda; Sadanand, Saheli; Garcia-Dominguez, Dario; Zheng, Lu; Rasmussen, Thomas A.; Jennewein, Madeleine F.; Linde, Caitlyn; Sassic, Jessica; Lofano, Giuseppe; Vigano, Selena; Stephenson, Kathryn E.; Fischinger, Stephanie; Suscovich, Todd J.; Lichterfeld, Mathias; Lauffenburger, Douglas; Rosenberg, Erik S.; Allen, Todd; Altfeld, Marcus; Charles, Richelle C.; Ostergaard, Lars; Tolstrup, Martin; Barouch, Dan H.; Sogaard, Ole S.; Alter, Galit
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Decreased mortality with rollout of electronic pneumonia clinical decision support across 16 Utah hospital emergency departments
err2020-10-28
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PREAI
errDean, Nathan; Vines, Caroline; Rubin, Jenna; Webb, Brandon; Jacobs, Jason; Butler, Allison; Lee, Jaehoon; Al Jephson; Jenson, Nathan; Walker, Missy; Irvin, Jeremy; Lungren, Matthew; Carr, Jason; Srivastava, Raj; Allen, Todd
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Dual CD4-based CAR T cells with distinct costimulatory domains mitigate HIV pathogenesis in vivo
err2020-08-31
err73
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errMaldini, Colby R.; Claiborne, Daniel T.; Okawa, Ken; Chen, Tao; Dopkin, Derrick L.; Shan, Xiaochuan; Power, Karen A.; Trifonova, Radiana T.; Krupp, Katharine; Phelps, Meredith; Vrbanac, Vladimir D.; Tanno, Serah; Bateson, Timothy; Leslie, George J.; Hoxie, James A.; Boutwell, Christian L.; Riley, James L.; Allen, Todd M.
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Gp41-targeted antibodies restore infectivity of a fusion-deficient HIV-1 envelope glycoprotein
err2020-05-11
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errOAAI
errJoshi, Vinita R.; Newman, Ruchi M.; Pack, Melissa L.; Power, Karen A.; Munro, James B.; Okawa, Ken; Madani, Navid; Sodroski, Joseph G.; Schmidt, Aaron G.; Allen, Todd M.
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Immunization of BLT Humanized Mice Redirects T Cell Responses to Gag and Reduces Acute HIV-1 Viremia
err2019-10-15
err24
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errClaiborne, Daniel T.; Dudek, Timothy E.; Maldini, Colby R.; Power, Karen A.; Ghebremichael, Musie; Seung, Edward; Mellors, Elizabeth F.; Vrbanac, Vladimir D.; Krupp, Katharine; Bisesi, Abigail; Tager, Andrew M.; Knipe, David M.; Boutwell, Christian L.; Allen, Todd M.
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Humanized immune system mouse models: progress, challenges and opportunities
err2019-06-03
err163
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errAllen, Todd M.; Brehm, Michael A.; Bridges, Sandra; Ferguson, Stacy; Kumar, Priti; Mirochnitchenko, Oleg; Palucka, Karolina; Pelanda, Roberta; Sanders-Beer, Brigitte; Shultz, Leonard D.; Su, Lishan; PrabhuDas, Mercy
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Role of HCV Viremia in Corroborated HCV Transmission Events Within Young Adult Injecting Partnerships
err2019-04-25
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errOAAI
errHahn, Judith A.; Tully, Damien C.; Evans, Jennifer L.; Morris, Meghan D.; Briceno, Alya; Bean, David J.; Allen, Todd M.; Page, Kimberly
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Lower Broadly Neutralizing Antibody Responses in Female Versus Male HIV-1 Infected Injecting Drug Users
err2019-04-25
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errOAAI
errEuler, Zelda; Van den Kerkhof, Tom L.; Kouyos, Roger D.; Tully, Damien C.; Allen, Todd M.; Trkola, Alexandra; Sanders, Rogier W.; Schuitemaker, Hanneke; Van Gils, Marit J.
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Capturing sequence diversity in metagenomes with comprehensive and scalable probe design
err2019-02-04
err91
errOAAI
errMetsky, Hayden C.; Siddle, Katherine J.; Gladden-Young, Adrianne; Qu, James; Yang, David K.; Brehio, Patrick; Goldfarb, Andrew; Piantadosi, Anne; Wohl, Shirlee; Carter, Amber; Lin, Aaron E.; Barnes, Kayla G.; Tully, Damien C.; Corleis, Bjorn; Hennigan, Scott; Barbosa-Lima, Giselle; Vieira, Yasmine R.; Paul, Lauren M.; Tan, Amanda L.; Garcia, Kimberly F.; Parham, Leda A.; Odia, Ikponmwosa; Eromon, Philomena; Folarin, Onikepe A.; Goba, Augustine; Simon-Loriere, Etienne; Hensley, Lisa; Balmaseda, Angel; Harris, Eva; Kwon, Douglas S.; Allen, Todd M.; Runstadler, Jonathan A.; Smole, Sandra; Bozza, Fernando A.; Souza, Thiago M. L.; Isern, Sharon; Michael, Scott F.; Lorenzana, Ivette; Gehrke, Lee; Bosch, Irene; Ebel, Gregory; Grant, Donald S.; Happi, Christian T.; Park, Daniel J.; Gnirke, Andreas; Sabeti, Pardis C.; Matranga, Christian B.
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Metagenomic Sequencing of HIV-1 in the Blood and Female Genital Tract Reveals Little Quasispecies Diversity during Acute Infection
err2019-01-15
err11
errOAAI
errPiantadosi, Anne; Freije, Catherine A.; Gosmann, Christina; Ye, Simon; Park, Daniel; Schaffner, Stephen F.; Tully, Damien C.; Allen, Todd M.; Dong, Krista L.; Sabeti, Pardis C.; Kwon, Douglas S.
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