Not logged in Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop Souza, Glaucia Mendes; Van Sluys, Marie-Anne; Lembke, Carolina Gimiliani; Lee, Hayan; Margarido, Gabriel Rodrigues Alves; Hotta, Carlos Takeshi; Gaiarsa, Jonas Weissmann; Diniz, Augusto Lima; Oliveira, Mauro de Medeiros; Ferreira, Savio de Siqueira; Nishiyama, Milton Yutaka; ten-Caten, Felipe; Ragagnin, Geovani Tolfo; Andrade, Pablo de Morais; de Souza, Robson Francisco; Nicastro, Gianlucca Goncalves; Pandya, Ravi; Kim, Changsoo; Guo, Hui; Durham, Alan Mitchell; Carneiro, Monalisa Sampaio; Zhang, Jisen; Zhang, Xingtan; Zhang, Qing; Ming, Ray; Schatz, Michael C.; Davidson, Bob; Paterson, Andrew H.; Heckerman, David Share Save
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Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L (vol 50, pg 1565, 2018) Zhang, Jisen; Zhang, Xingtan; Tang, Haibao; Zhang, Qing; Hua, Xiuting; Ma, Xiaokai; Zhu, Fan; Jones, Tyler; Zhu, Xinguang; Bowers, John; Wai, Ching Man; Zheng, Chunfang; Shi, Yan; Chen, Shuai; Xu, Xiuming; Yue, Jingjing; Nelson, David R.; Huang, Lixian; Li, Zhen; Xu, Huimin; Zhou, Dong; Wang, Yongjun; Hu, Weichang; Lin, Jishan; Deng, Youjin; Pandey, Neha; Mancini, Melina; Zerpa, Dessiree; Nguyen, Julie K.; Wang, Liming; Yu, Liang; Xin, Yinghui; Ge, Liangfa; Arro, Jie; Han, Jennifer O.; Chakrabarty, Setu; Pushko, Marija; Zhang, Wenping; Ma, Yanhong; Ma, Panpan; Lv, Mingju; Chen, Faming; Zheng, Guangyong; Xu, Jingsheng; Yang, Zhenhui; Deng, Fang; Chen, Xuequn; Liao, Zhenyang; Zhang, Xunxiao; Lin, Zhicong; Lin, Hai; Yan, Hansong; Kuang, Zheng; Zhong, Weimin; Liang, Pingping; Wang, Guofeng; Yuan, Yuan; Shi, Jiaxian; Hou, Jinxiang; Lin, Jingxian; Jin, Jingjing; Cao, Peijian; Shen, Qiaochu; Jiang, Qing; Zhou, Ping; Ma, Yaying; Zhang, Xiaodan; Xu, Rongrong; Liu, Juan; Zhou, Yongmei; Jia, Haifeng; Ma, Qing; Qi, Rui; Zhang, Zhiliang; Fang, Jingping; Fang, Hongkun; Song, Jinjin; Wang, Mengjuan; Dong, Guangrui; Wang, Gang; Chen, Zheng; Ma, Teng; Liu, Hong; Dhungana, Singha R.; Huss, Sarah E.; Yang, Xiping; Sharma, Anupma; Trujillo, Jhon H.; Martinez, Maria C.; Hudson, Matthew; Riascos, John J.; Schuler, Mary; Chen, Li-Qing; Braun, David M.; Li, Lei; Yu, Qingyi; Wang, Jianping; Wang, Kai; Schatz, Michael C.; Heckerman, David; Van Sluys, Marie-Anne; Souza, Glaucia Mendes; Moore, Paul H.; Sankoff, David; VanBuren, Robert; Paterson, Andrew H.; Nagai, Chifumi; Ming, Ray Share Save
Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. Zhang, Jisen; Zhang, Xingtan; Tang, Haibao; Zhang, Qing; Hua, Xiuting; Ma, Xiaokai; Zhu, Fan; Jones, Tyler; Zhu, Xinguang; Bowers, John; Wai, Ching Man; Zheng, Chunfang; Shil, Yan; Chen, Shuai; Xu, Xiuming; Yue, Jingjing; Nelsons, David R.; Huang, Lixian; Li, Zhen; Xu, Huimin; Zhou, Dong; Wang, Yongjun; Hu, Weichang; Lin, Jishan; Deng, Youjin; Pandey, Neha; Mancini, Melina; Zerpa, Dessiree; Nguyen, Julie K.; Wang, Liming; Yu, Liang; Xin, Yinghui; Ge, Liangfa; Arro, Jie; Han, Jennifer O.; Chakrabarty, Setu; Pushko, Marija; Zhang, Wenping; Ma, Yanhong; Ma, Panpan; Lv, Mingju; Chen, Faming; Zheng, Guangyong; Xu, Jingsheng; Yang, Zhenhui; Deng, Fang; Chen, Xuequn; Liao, Zhenyang; Zhang, Xunxiao; Lin, Zhicong; Lin, Hai; Yan, Hansong; Kuang, Zheng; Zhong, Weimin; Liang, Pingping; Wang, Guofeng; Yuan, Yuan; Shi, Jiaxian; Hou, Jinxiang; Lin, Jingxian; Jin, Jingjing; Cao, Peijian; Shen, Qiaochu; Jiang, Qing; Zhou, Ping; Ma, Yaying; Zhang, Xiaodan; Xu, Rongrong; Liu, Juan; Zhou, Yongmei; Jia, Haifeng; Ma, Qing; Qi, Rui; Zhang, Zhiliang; Fang, Jingping; Fang, Hongkun; Song, Jinjin; Wang, Mengjuan; Dong, Guangrui; Wang, Gang; Chen, Zheng; Ma, Teng; Liu, Hong; Dhungana, Singha R.; Huss, Sarah E.; Yang, Xiping; Sharma, Anupma; Trujillo, Jhon H.; Martinez, Maria C.; Hudson, Matthew; Riascos, John J.; Schuler, Mary; Chen, Li-Qing; Braun, David M.; Li, Lei; Yu, Qingyi; Wang, Jianping; Wang, Kai; Schatz, Michael C.; Heckerman, David; Van Sluys, Marie-Anne; Souza, Glaucia Mendes; Moore, Paul H.; Sankoff, David; VanBuren, Robert; Paterson, Andrew H.; Nagai, Chifumi; Ming, Ray Share Save
Genetic variants associated with physical performance and anthropometry in old age: a genome-wide association study in the ilSIRENTE cohort Heckerman, David; Traynor, Bryan J.; Picca, Anna; Calvani, Riccardo; Marzetti, Emanuele; Hernandez, Dena; Nalls, Michael; Arepali, Sampath; Ferrucci, Luigi; Landi, Francesco Share Save
Profiling of Short-Tandem-Repeat Disease Alleles in 12,632 Human Whole Genomes Tang, Haibao; Kirkness, Ewen F.; Lippert, Christoph; Biggs, William H.; Fabani, Martin; Guzman, Ernesto; Ramakrishnan, Smriti; Lavrenko, Victor; Kakaradov, Boyko; Hou, Claire; Hicks, Barry; Heckerman, David; Och, Franz J.; Caskey, C. Thomas; Venter, J. Craig; Telenti, Amalio Share Save
Linear mixed model for heritability estimation that explicitly addresses environmental variation Heckerman, David; Gurdasani, Deepti; Kadie, Carl; Pomilla, Cristina; Carstensen, Tommy; Martin, Hilary; Ekoru, Kenneth; Nsubuga, Rebecca N.; Ssenyomo, Gerald; Kamali, Anatoli; Kaleebu, Pontiano; Widmer, Christian; Sandhu, Manjinder S. Share Save
Impact of pre-adapted HIV transmission Carlson, Jonathan M.; Du, Victor Y.; Pfeifer, Nico; Bansal, Anju; Tan, Vincent Y. F.; Power, Karen; Brumme, Chanson J.; Kreimer, Anat; DeZiel, Charles E.; Fusi, Nicolo; Schaefer, Malinda; Brockman, Mark A.; Gilmour, Jill; Price, Matt A.; Kilembe, William; Haubrich, Richard; John, Mina; Mallal, Simon; Shapiro, Roger; Frater, John; Harrigan, P. Richard; Ndung'u, Thumbi; Allen, Susan; Heckerman, David; Sidney, John; Allen, Todd M.; Goulder, Philip J. R.; Brumme, Zabrina L.; Hunter, Eric; Goepfert, Paul A. Share Save
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Immune Screening Identifies Novel T Cell Targets Encoded by Antisense Reading Frames of HIV-1 Berger, Christoph T.; Llano, Anuska; Carlson, Jonathan M.; Brumme, Zabrina L.; Brockman, Mark A.; Cedeno, Samandhy; Harrigan, P. Richard; Kaufmann, Daniel E.; Heckerman, David; Meyerhans, Andreas; Brander, Christian Share Save
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HIV Control Is Mediated in Part by CD8+ T-Cell Targeting of Specific Epitopes Pereyra, Florencia; Heckerman, David; Carlson, Jonathan M.; Kadie, Carl; Soghoian, Damien Z.; Karel, Daniel; Goldenthal, Ariel; Davis, Oliver B.; DeZiel, Charles E.; Lin, Tienho; Peng, Jian; Piechocka, Alicja; Carrington, Mary; Walker, Bruce D. Share Save
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Emergence of Individual HIV-Specific CD8 T Cell Responses during Primary HIV-1 Infection Can Determine Long-Term Disease Outcome Streeck, Hendrik; Lu, Richard; Beckwith, Noor; Milazzo, Mark; Liu, Michelle; Routy, Jean-Pierre; Little, Susan; Jessen, Heiko; Kelleher, Anthony D.; Hecht, Frederick; Sekaly, Rafick-Pierre; Alter, Galit; Heckerman, David; Carrington, Mary; Rosenberg, Eric S.; Altfeld, Marcus Share Save
INVESTIGATION OF HEPATITIS C VIRUS ADAPTATION TO HOST GENETIC POLYMORPHISMS Drobnik, J.; Lemay, J.; Carlson, J. M.; Kutalik, Z.; Heckerman, D.; Heim, M. H.; Dufour, J. -F.; Patin, E.; Semela, D.; Cerny, A.; Nalpas, B.; Malinverni, R.; Moradpour, D.; Pol, S.; Muellhaupt, B.; Negro, F.; Abel, L.; Bochud, P. -Y.; Kuntzen, T. Share Save
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Increased Sequence Coverage through Combined Targeting of Variant and Conserved Epitopes Correlates with Control of HIV Replication Sunshine, Justine; Kim, Moon; Carlson, Jonathan M.; Heckerman, David; Czartoski, Julie; Migueles, Stephen A.; Maenza, Janine; McElrath, M. Juliana; Mullins, James I.; Frahm, Nicole Share Save
A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control Bartha, Istvan; Carlson, Jonathan M.; Brumme, Chanson J.; McLaren, Paul J.; Brumme, Zabrina L.; John, Mina; Haas, David W.; Martinez-Picado, Javier; Dalmau, Judith; Lopez-Galindez, Cecilio; Casado, Concepcion; Rauch, Andri; Guenthard, Huldrych F.; Bernasconi, Enos; Vernazza, Pietro; Klimkait, Thomas; Yerly, Sabine; O'Brien, Stephen J.; Listgarten, Jennifer; Pfeifer, Nico; Lippert, Christoph; Fusi, Nicolo; Kutalik, Zoltan; Allen, Todd M.; Mueller, Viktor; Harrigan, P. Richard; Heckerman, David; Telenti, Amalio; Fellay, Jacques Share Save
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