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J

J. Rodney Brister

National Institutes of Health

33H-index
68Paper Count
1.7WCitation Count
Published Papers 30
Publication Date
STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
err2025-12-01
err0
PREAI
errJulia M. Kelliher; Chloe Mirzayi; Sarah R. Bordenstein; Aaron Oliver; Christina A. Kellogg; Eneida L. Hatcher; Maureen Berg; Petr Baldrian; Mashael Aljumaah; Cassandra Maria Luz Miller; Christopher Mungall; Vlastimil Novak; Alexis Palucki; Ethan Smith; Nazifa Tabassum; Gregory Bonito; J. Rodney Brister; Patrick S. G. Chain; Mingfei Chen; Samuel Degregori; Jose Pablo Dundore-Arias; Joanne B. Emerson; Vanessa Moreira C. Fernandes; Roberto Flores; Antonio Gonzalez; Zoe A. Hansen; Scott A. Jackson; Ahmed M. Moustafa; Trent R. Northen; Nonia Pariente; Jennifer Pett-Ridge; Sydne Record; Linta Reji; Anna-Louise Reysenbach; Virginia I. Rich; Lorna Richardson; Simon Roux; Lynn M. Schriml; Reed S. Shabman; Maria A. Sierra; Matthew B. Sullivan; Punithavathi Sundaramurthy; Katherine M. Thibault; Luke R. Thompson; Scott Tighe; Ethell Vereen; Emiley A. Eloe-Fadrosh
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Database resources of the National Center for Biotechnology Information in 2025
err2024-11-11
err1
errOAAI
errSayers, Eric W.; Beck, Jeffrey; Bolton, Evan E.; Brister, J. Rodney; Chan, Jessica; Connor, Ryan; Feldgarden, Michael; Fine, Anna M.; Funk, Kathryn; Hoffman, Jinna; Kannan, Sivakumar; Kelly, Christopher; Klimke, William; Kim, Sunghwan; Lathrop, Stacy; Marchler-Bauer, Aron; Murphy, Terence D.; O'Sullivan, Chris; Schmieder, Erin; Skripchenko, Yuriy; Stine, Adam; Thibaud-Nissen, Francoise; Wang, Jiyao; Ye, Jian; Zellers, Erin; Schneider, Valerie A.; Pruitt, Kim D.
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Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows
err2024-03-11
err1
errOAAI
errConnor, Ryan; Shakya, Migun; Yarmosh, David A.; Maier, Wolfgang; Martin, Ross; Bradford, Rebecca; Brister, J. Rodney; Chain, Patrick S. G.; Copeland, Courtney A.; di Iulio, Julia; Hu, Bin; Ebert, Philip; Gunti, Jonathan; Jin, Yumi; Katz, Kenneth S.; Kochergin, Andrey; LaRosa, Tre; Li, Jiani; Li, Po-E; Lo, Chien-Chi; Rashid, Sujatha; Maiorova, Evguenia S.; Xiao, Chunlin; Zalunin, Vadim; Purcell, Lisa; Pruitt, Kim D.
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Putting everything in its place: using the INSDC compliant Pathogen Data Object Model to better structure genomic data submitted for public health applications
err2023-12-12
err4
errOAAI
errTimme, Ruth E.; Karsch-Mizrachi, Ilene; Waheed, Zahra; Arita, Masanori; Maccannell, Duncan; Maguire, Finlay; Petit III, Robert; Page, Andrew J.; Mendes, Catarina Ines; Nasar, Muhammad Ibtisam; Oluniyi, Paul; Tyler, Andrea D.; Raphenya, Amogelang R.; Guthrie, Jennifer L.; Olawoye, Idowu; Rinck, Gabriele; O'Cathail, Colman; Lees, John; Cochrane, Guy; Cummins, Carla; Brister, J. Rodney; Klimke, William; Feldgarden, Michael; Griffiths, Emma
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Database resources of the National Center for Biotechnology Information
err2023-11-22
err48
errOAAI
errSayers, Eric W.; Beck, Jeff; Bolton, Evan E.; Brister, J. Rodney; Chan, Jessica; Comeau, Donald C.; Connor, Ryan; DiCuccio, Michael; Farrell, Catherine M.; Feldgarden, Michael; Fine, Anna M.; Funk, Kathryn; Hatcher, Eneida; Hoeppner, Marilu; Kane, Megan; Kannan, Sivakumar; Katz, Kenneth S.; Kelly, Christopher; Klimke, William; Kim, Sunghwan; Kimchi, Avi; Landrum, Melissa; Lathrop, Stacy; Lu, Zhiyong; Malheiro, Adriana; Marchler-Bauer, Aron; Murphy, Terence D.; Phan, Lon; Prasad, Arjun B.; Pujar, Shashikant; Sawyer, Amanda; Schmieder, Erin; Schneider, Valerie A.; Schoch, Conrad L.; Sharma, Shobha; Thibaud-Nissen, Francoise; Trawick, Barton W.; Venkatapathi, Thilakam; Wang, Jiyao; Pruitt, Kim D.; Sherry, Stephen T.
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification (vol 41, pg 898, 2023)
err2023-08-22
err0
errOAAI
errAdriaenssens, Evelien M. M.; Roux, Simon; Brister, J. Rodney; Karsch-Mizrachi, Ilene; Kuhn, Jens H.; Varsani, Arvind; Yigang, Tong; Reyes, Alejandro; Lood, Cedric; Lefkowitz, Elliot J.; Sullivan, Matthew B. B.; Edwards, Robert A. A.; Simmonds, Peter; Rubino, Luisa; Sabanadzovic, Sead; Krupovic, Mart; Dutilh, Bas E. E.
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
err2023-07-10
err9
errOAAI
errAdriaenssens, Evelien M. M.; Roux, Simon; Brister, J. Rodney; Karsch-Mizrachi, Ilene; Kuhn, Jens H. H.; Varsani, Arvind; Yigang, Tong; Reyes, Alejandro; Lood, Cedric; Lefkowitz, Elliot J. J.; Sullivan, Matthew B. B.; Edwards, Robert A. A.; Simmonds, Peter; Rubino, Luisa; Sabanadzovic, Sead; Krupovic, Mart; Dutilh, Bas E. E.
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Database resources of the National Center for Biotechnology Information in 2023
err2022-11-12
err162
errOAAI
errSayers, Eric W.; Bolton, Evan E.; Brister, J. Rodney; Canese, Kathi; Chan, Jessica; Comeau, Donald C.; Farrell, Catherine M.; Feldgarden, Michael; Fine, Anna M.; Funk, Kathryn; Hatcher, Eneida; Kannan, Sivakumar; Kelly, Christopher; Kim, Sunghwan; Klimke, William; Landrum, Melissa J.; Lathrop, Stacy; Lu, Zhiyong; Madden, Thomas L.; Malheiro, Adriana; Marchler-Bauer, Aron; Murphy, Terence D.; Phan, Lon; Pujar, Shashikant; Rangwala, Sanjida H.; Schneider, Valerie A.; Tse, Tony; Wang, Jiyao; Ye, Jian; Trawick, Barton W.; Pruitt, Kim D.; Sherry, Stephen T.
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Quantifying the immunological distinctiveness of emerging SARS-CoV-2 variants in the context of prior regional herd exposure
err2022-07-04
err0
errOAAI
errNiesen, Michiel J. M.; Murugadoss, Karthik; Lenehan, Patrick J.; Marchler-Bauer, Aron; Wang, Jiyao; Connor, Ryan; Brister, J. Rodney; Venkatakrishnan, A. J.; Soundararajan, Venky
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Perspective on taxonomic classification of uncultivated viruses
err2021-12-01
err34
errOAAI
errDutilh, Bas E.; Varsani, Arvind; Tong, Yigang; Simmonds, Peter; Sabanadzovic, Sead; Rubino, Luisa; Roux, Simon; Reyes Munoz, Alejandro; Lood, Cedric; Lefkowitz, Elliot J.; Kuhn, Jens H.; Krupovic, Mart; Edwards, Robert A.; Brister, J. Rodney; Adriaenssens, Evelien M.; Sullivan, Matthew B.
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The Sequence Read Archive: a decade more of explosive growth
err2021-11-24
err151
errOAAI
errKatz, Kenneth; Shutov, Oleg; Lapoint, Richard; Kimelman, Michael; Brister, J. Rodney; O'Sullivan, Christopher
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STAT: a fast, scalable, MinHash-based k-mer tool to assess Sequence Read Archive next-generation sequence submissions
err2021-09-20
err46
errOAAI
errKatz, Kenneth S.; Shutov, Oleg; Lapoint, Richard; Kimelman, Michael; Brister, J. Rodney; O'Sullivan, Christopher
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Database resources of the National Center for Biotechnology Information
err2020-10-23
err410
errOAAI
errSayers, Eric W.; Beck, Jeffrey; Bolton, Evan E.; Bourexis, Devon; Brister, James R.; Canese, Kathi; Comeau, Donald C.; Funk, Kathryn; Kim, Sunghwan; Klimke, William; Marchler-Bauer, Aron; Landrum, Melissa; Lathrop, Stacy; Yu, Zhiyong; Madden, Thomas L.; O'Leary, Nuala; Phan, Lon; Rangwala, Sanjida H.; Schneider, Valerie A.; Skripchenko, Yuri; Wang, Jiyao; Ye, Jian; Trawick, Barton W.; Pruitt, Kim D.; Sherry, Stephen T.
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Database resources of the National Center for Biotechnology Information
err2019-10-11
err1.2K
errOAAI
errSayers, Eric W.; Beck, Jeff; Brister, J. Rodney; Bolton, Evan E.; Canese, Kathi; Comeau, Donald C.; Funk, Kathryn; Ketter, Anne; Kim, Sunghwan; Kimchi, Avi; Kitts, Paul A.; Kuznetsov, Anatoliy; Lathrop, Stacy; Lu, Zhiyong; McGarvey, Kelly; Madden, Thomas L.; Murphy, Terence D.; O'Leary, Nuala; Phan, Lon; Schneider, Valerie A.; Thibaud-Nissen, Francoise; Trawick, Bart W.; Pruitt, Kim D.; Ostell, James
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Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages
err2019-05-25
err87
errOAAI
errBarylski, Jakub; Enault, Francois; Dutilh, Bas E.; Schuller, Margo B. P.; Edwards, Robert A.; Gillis, Annika; Klumpp, Jochen; Knezevic, Petar; Krupovic, Mart; Kuhn, Jens H.; Lavigne, Rob; Oksanen, Hanna M.; Sullivan, Matthew B.; Jang, Ho Bin; Simmonds, Peter; Aiewsakun, Pakorn; Wittmann, Johannes; Tolstoy, Igor; Brister, J. Rodney; Kropinski, Andrew M.; Adriaenssens, Evelien M.
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Strengthening the Interaction of the Virology Community with the International Committee on Taxonomy of Viruses (ICTV) by Linking Virus Names and Their Abbreviations to Virus Species
err2019-01-28
err12
errOAAI
errCalisher, Charles H.; Briese, Thomas; Brister, J. Rodney; Charrel, Remi N.; Duerrwald, Ralf; Ebihara, Hideki; Fulhorst, Charles F.; Gao, George Fu; Groschup, Martin H.; Haddow, Andrew D.; Hyndman, Timothy H.; Junglen, Sandra; Klempa, Boris; Klingstroem, Jonas; Kropinski, Andrew M.; Krupovic, Mart; LaBeaud, A. Desiree; Maes, Piet; Nowotny, Norbert; Teixeira Nunes, Marcio Roberto; Payne, Susan L.; Radoshitzky, Sheli R.; Rubbenstroth, Dennis; Sabanadzovic, Sead; Sasaya, Takahide; Stenglein, Mark D.; Varsani, Arvind; Wahl, Victoria; Weaver, Scott C.; Zerbini, Francisco Murilo; Vasilakis, Nikos; Kuhn, Jens H.
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The Phylogeny and Pathogenesis of Sacbrood Virus (SBV) Infection in European Honey Bees, Apis mellifera
err2019-01-14
err32
errOAAI
errLi, Jianghong; Wang, Tingyun; Evans, Jay D.; Rose, Robyn; Zhao, Yazhou; Li, Zhiguo; Li, Jilian; Huang, Shaokang; Heerman, Matthew; Rodriguez-Garcia, Cristina; Banmeke, Olubukola; Brister, J. Rodney; Hatcher, Eneida L.; Cao, Lianfei; Hamilton, Michele; Chen, Yanping
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Minimum Information about an Uncultivated Virus Genome (MIUViG)
err2018-12-17
err370
errOAAI
errRoux, Simon; Adriaenssens, Evelien M.; Dutilh, Bas E.; Koonin, Eugene V.; Kropinski, Andrew M.; Krupovic, Mart; Kuhn, Jens H.; Lavigne, Rob; Brister, J. Rodney; Varsani, Arvind; Amid, Clara; Aziz, Ramy K.; Bordenstein, Seth R.; Bork, Peer; Breitbart, Mya; Cochrane, Guy R.; Daly, Rebecca A.; Desnues, Christelle; Duhaime, Melissa B.; Emerson, Joanne B.; Enault, Francois; Fuhrman, Jed A.; Hingamp, Pascal; Hugenholtz, Philip; Hurwitz, Bonnie L.; Ivanova, Natalia N.; Labonte, Jessica M.; Lee, Kyung-Bum; Malmstrom, Rex R.; Martinez-Garcia, Manuel; Mizrachi, Ilene Karsch; Ogata, Hiroyuki; Paez-Espino, David; Petit, Marie-Agnes; Putonti, Catherine; Rattei, Thomas; Reyes, Alejandro; Rodriguez-Valera, Francisco; Rosario, Karyna; Schriml, Lynn; Schulz, Frederik; Steward, Grieg F.; Sullivan, Matthew B.; Sunagawa, Shinichi; Suttle, Curtis A.; Temperton, Ben; Tringe, Susannah G.; Thurber, Rebecca Vega; Webster, Nicole S.; Whiteson, Katrine L.; Wilhelm, Steven W.; Wommack, K. Eric; Woyke, Tanja; Wrighton, Kelly C.; Yilmaz, Pelin; Yoshida, Takashi; Young, Mark J.; Yutin, Natalya; Allen, Lisa Zeigler; Kyrpides, Nikos C.; Eloe-Fadrosh, Emiley A.
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Database resources of the National Center for Biotechnology Information
err2018-11-05
err1.1K
errOAAI
errSayers, Eric W.; Agarwala, Richa; Bolton, Evan E.; Brister, J. Rodney; Canese, Kathi; Clark, Karen; Connor, Ryan; Fiorini, Nicolas; Funk, Kathryn; Hefferon, Timothy; Holmes, J. Bradley; Kim, Sunghwan; Kimchi, Avi; Kitts, Paul A.; Lathrop, Stacy; Lu, Zhiyong; Madden, Thomas L.; Marchler-Bauer, Aron; Phan, Lon; Schneider, Valerie A.; Schoch, Conrad L.; Pruitt, Kim D.; Ostell, James
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Database resources of the National Center for Biotechnology Information
err2017-11-13
err2.5K
errOAAI
errAgarwala, Richa; Barrett, Tanya; Beck, Jeff; Benson, Dennis A.; Bollin, Colleen; Bolton, Evan; Bourexis, Devon; Brister, J. Rodney; Bryant, Stephen H.; Canese, Kathi; Cavanaugh, Mark; Charowhas, Chad; Clark, Karen; Dondoshansky, Ilya; Feolo, Michael; Fitzpatrick, Lawrence; Funk, Kathryn; Geer, Lewis Y.; Gorelenkov, Viatcheslav; Graeff, Alan; Hlavina, Wratko; Holmes, Brad; Johnson, Mark; Kattman, Brandi; Khotomlianski, Viatcheslav; Kimchi, Avi; Kimelman, Michael; Kimura, Masato; Kitts, Paul; Klimke, William; Kotliarov, Alex; Krasnov, Sergey; Kuznetsov, Anatoliy; Landrum, Melissa J.; Landsman, David; Lathrop, Stacy; Lee, Jennifer M.; Leubsdorf, Carl; Lu, Zhiyong; Madden, Thomas L.; Marchler-Bauer, Aron; Malheiro, Adriana; Meric, Peter; Karsch-Mizrachi, Ilene; Mnev, Anatoly; Murphy, Terence; Orris, Rebecca; Ostell, James; O'Sullivan, Christopher; Palanigobu, Vasuki; Panchenko, Anna R.; Phan, Lon; Pierov, Borys; Pruitt, Kim D.; Rodarmer, Kurt; Sayers, Eric W.; Schneider, Valerie; Schoch, Conrad L.; Schuler, Gregory D.; Sherry, Stephen T.; Siyan, Karanjit; Soboleva, Alexandra; Soussov, Vladimir; Starchenko, Grigory; Tatusova, Tatiana A.; Thibaud-Nissen, Francoise; Todorov, Kamen; Trawick, Bart W.; Vakatov, Denis; Ward, Minghong; Yaschenko, Eugene; Zasypkin, Aleksandr; Zbicz, Kerry
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