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Unravelling the enzymatic wood decay repertoire of Cerrena zonata: A multi-omics approach Broel, Niklas; Daumueller, Franziska; Ali, Arslan; Lemanschick, Jasmin; Maibach, Katharina; Mewe, Carolin; Bunk, Boyke; Sproeer, Cathrin; Baschien, Christiane; Zorn, Holger; Schlueter, Hartmut; Ruehl, Martin; Janssen, Stefan Share Save
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A gut instinct for childhood leukemia prevention: microbiome-targeting recommendations aimed at parents and caregivers Kameri, Ersen; Jepsen, Vera Helena; Stachura, Pawel; Ruechel, Nadine; Bhave, Rigveda; Benitez, Leticia; Crispi, Fatima; Gratacos, Eduard; Dragano, Nico; Janssen, Stefan; Borkhardt, Arndt; Pandyra, Aleksandra; Koegler, Gesine; Fischer, Ute Share Save
TEMPTED: time-informed dimensionality reduction for longitudinal microbiome studies Shi, Pixu; Martino, Cameron; Han, Rungang; Janssen, Stefan; Buck, Gregory; Serrano, Myrna; Owzar, Kouros; Knight, Rob; Shenhav, Liat; Zhang, Anru R. Share Save
The host genotype actively shapes its microbiome across generations in laboratory mice Benga, Laurentiu; Rehm, Anna; Gougoula, Christina; Westhoff, Philipp; Wachtmeister, Thorsten; Benten, W. Peter M.; Engelhardt, Eva; Weber, Andreas P. M.; Koehrer, Karl; Sager, Martin; Janssen, Stefan Share Save
Nucleocapsids of the Rift Valley fever virus ambisense S segment contain an exposed RNA element in the center that overlaps with the intergenic region Shalamova, Lyudmila; Barth, Patrick; Pickin, Matthew J.; Kouti, Kiriaki; Ott, Benjamin; Humpert, Katharina; Janssen, Stefan; Lorenzo, Gema; Brun, Alejandro; Goesmann, Alexander; Hain, Torsten; Hartmann, Roland K.; Rossbach, Oliver; Weber, Friedemann Share Save
Robustness of cancer microbiome signals over a broad range of methodological variation (vol 43, pg 1127, 2024) Sepich-Poore, Gregory D.; McDonald, Daniel; Kopylova, Evguenia; Guccione, Caitlin; Zhu, Qiyun; Austin, George; Carpenter, Carolina; Fraraccio, Serena; Wandro, Stephen; Kosciolek, Tomasz; Janssen, Stefan; Metcalf, Jessica L.; Song, Se Jin; Kanbar, Jad; Miller-Montgomery, Sandrine; Heaton, Robert; Mckay, Rana; Patel, Sandip Pravin; Swafford, Austin D.; Korem, Tal; Knight, Rob Share Save
Robustness of cancer microbiome signals over a broad range of methodological variation Sepich-Poore, Gregory D.; Mcdonald, Daniel; Kopylova, Evguenia; Guccione, Caitlin; Zhu, Qiyun; Austin, George; Carpenter, Carolina; Fraraccio, Serena; Wandro, Stephen; Kosciolek, Tomasz; Janssen, Stefan; Metcalf, Jessica L.; Song, Se Jin; Kanbar, Jad; Miller-Montgomery, Sandrine; Heaton, Robert; Mckay, Rana; Patel, Sandip Pravin; Swafford, Austin D.; Korem, Tal; Knight, Rob Share Save
Predominant transmission of KPC-2 carbapenemase in Germany by a unique IncN plasmid variant harboring a novel non-transposable element (NTEKPC-Y) Yao, Yancheng; Falgenhauer, Linda; Rezazadeh, Yalda; Falgenhauer, Jane; Imirzalioglu, Can; Chakraborty, Trinad; Kumaraswamy, Monika; Hauri, Anja M.; Heinmueller, Petra; Domann, Eugen; Ghosh, Hiren; Goesmann, Alexander; Janssen, Stefan; Gatermann, Soeren; Kaase, Martin; Pfennigwerth, Niels; Exner, Martin; Overmann, Joerg; Bunk, Boyke; Sproeer, Cathrin Share Save
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Sequence-structure-function relationships in the microbial protein universe Leman, Julia Koehler; Szczerbiak, Pawel; Renfrew, P. Douglas; Gligorijevic, Vladimir; Berenberg, Daniel; Vatanen, Tommi; Taylor, Bryn C.; Chandler, Chris; Janssen, Stefan; Pataki, Andras; Carriero, Nick; Fisk, Ian; Xavier, Ramnik J.; Knight, Rob; Bonneau, Richard; Kosciolek, Tomasz Share Save
Cytokine Hyperresponsiveness in Children With ETV6::RUNX1-positive Acute Lymphoblastic Leukemia After Challenge With Common Pathogens Ruechel, Nadine; Oldenburg, Marina; Janssen, Stefan; Pandyra, Aleksandra A.; Liu, Wei; Vasileiou, Eleni; Hein, Daniel; Jepsen, Vera Helena; Fischer, Ute; Picard, Daniel; Koegler, Gesine; Hauer, Julia; Auer, Franziska; Beer, Angelina; Adams, Ortwin; MacKenzie, Colin; Jaeger, Martin; Netea, Mihai G.; Borkhardt, Arndt; Gossling, Katharina L. Share Save
EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets Cantrell, Kalen; Fedarko, Marcus W.; Rahman, Gibraan; McDonald, Daniel; Yang, Yimeng; Zaw, Thant; Gonzalez, Antonio; Janssen, Stefan; Estaki, Mehrbod; Haiminen, Niina; Beck, Kristen L.; Zhu, Qiyun; Sayyari, Erfan; Morton, James T.; Armstrong, George; Tripathi, Anupriya; Gauglitz, Julia M.; Marotz, Clarisse; Matteson, Nathaniel L.; Martino, Cameron; Sanders, Jon G.; Carrieri, Anna Paola; Song, Se Jin; Swafford, Austin D.; Dorrestein, Pieter C.; Andersen, Kristian G.; Parida, Laxmi; Kim, Ho-Cheol; Vazquez-Baeza, Yoshiki; Knight, Rob Share Save
Insights into the genome and secretome of Fusarium metavorans DSM105788 by cultivation on agro-residual biomass and synthetic nutrient sources Brandt, Sophie C.; Brognaro, Hevila; Ali, Arslan; Ellinger, Bernhard; Maibach, Katharina; Ruehl, Martin; Wrenger, Carsten; Schlueter, Hartmut; Schaefer, Wilhelm; Betzel, Christian; Janssen, Stefan; Gand, Martin Share Save
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