Chirag Jain - Publications, H-index & Citations

Chirag Jain

indian institute of science (iisc) - bangalore

18H指数

79论文数

1.1W被引数

收录论文 10

发表时间

Pangenome-based genome inference using integer programming 基于泛基因组的基因组推断整数规划方法

GENOME RESEARCH

IF5.5

2025-12-01

PREAI

Chandra, Ghanshyam; Hossen, Md Helal; Scholz, Stephan; Dilthey, Alexander T.; Gibney, Daniel; Jain, Chirag

On the Coverage Required for Diploid Genome Assembly

IEEE Transactions on Computational Biology and Bioinformatics

IF0

2025-11-01

PREAI

Mahajan, Daanish; Jain, Chirag; Kashyap, Navin

FastAAI: efficient estimation of genome average amino acid identity and phylum-level relationships using tetramers of universal proteins FastAAI：利用通用蛋白四聚体高效估算基因组平均氨基酸同源性和门级关系

NUCLEIC ACIDS RESEARCH

IF13.1

2025-04-26

OAAI

Gerhardt, Kenji; Ruiz-Perez, Carlos A.; Rodriguez-R, Luis M.; Jain, Chirag; Tiedje, James M.; Cole, James R.

Telomere-to-telomere assembly by preserving contained reads

GENOME RESEARCH

IF5.5

2024-10-15

OAAI

Kamath, Sudhanva Shyam; Bindra, Mehak; Pal, Debnath; Jain, Chirag

Critical review on the developments in polymer composite materials for biomedical implants 生物医学植入物用高分子复合材料的发展综述

JOURNAL OF BIOMATERIALS SCIENCE-POLYMER EDITION

IF3.6

2022-11-18

PREAI

Jain, Chirag; Surabhi, Prabhav; Marathe, Kumudinee

Long-read mapping to repetitive reference sequences using Winnowmap2 使用Winnowmap2将长读映射到重复参考序列

NATURE METHODS

IF32.1

2022-04-01

OAAI

Jain, Chirag; Rhie, Arang; Hansen, Nancy F.; Koren, Sergey; Phillippy, Adam M.

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies 追求完美: 端粒到端粒基因组组装的验证和抛光策略

NATURE METHODS

IF32.1

2022-03-31

OAAI

Cartney, Ann M. Mc; Shafin, Kishwar; Alonge, Michael; Bzikadze, Andrey, V; Formenti, Giulio; Fungtammasan, Arkarachai; Howe, Kerstin; Jain, Chirag; Koren, Sergey; Logsdon, Glennis A.; Miga, Karen H.; Mikheenko, Alla; Paten, Benedict; Shumate, Alaina; Soto, Daniela C.; Sovic, Ivan; Wood, Jonathan Md; Zook, Justin M.; Phillippy, Adam M.; Rhie, Arang

Accelerating minimap2 for long-read sequencing applications on modern CPUs

NATURE COMPUTATIONAL SCIENCE

IF18.3

2022-02-28

PREAI

Kalikar, Saurabh; Jain, Chirag; Vasimuddin, Md; Misra, Sanchit

Strain-level metagenomic assignment and compositional estimation for long reads with MetaMaps 用元图谱进行长读段的菌株水平宏基因组分配和组成估计

NATURE COMMUNICATIONS

IF15.7

2019-07-11

OAAI

Dilthey, Alexander T.; Jain, Chirag; Koren, Sergey; Phillippy, Adam M.