Aleksandr B. Sahakyan - Publications, H-index & Citations

Aleksandr B. Sahakyan

University of Oxford

16H指数

55论文数

1.9K被引数

收录论文 21

发表时间

Analysis of long-range contacts across cell types outlines a core sequence determinant of 3D genome organization 跨细胞类型的长程接触分析概述了3D基因组组织的一个核心序列决定因子

NAR GENOMICS AND BIOINFORMATICS

IF2.8

2025-12-01

PREAI

Tamon, Liezel; Fahmi, Zahra; Ashford, James; Collepardo-Guevara, Rosana; Sahakyan, Aleksandr B.

Prior knowledge on context-driven DNA fragmentation probabilities can improve de novo genome assembly algorithms 关于基于上下文的DNA片段化概率的先验知识可以改进从头基因组组装算法。

BMC Bioinformatics

IF3.3

2025-10-15

OAAI

Patrick Pflughaupt; Aleksandr B. Sahakyan

The emerging sequence grammar of 3D genome organisation 三维基因组组织的新兴序列语法

Human Genetics

IF3.6

2025-08-25

OAAI

Liezel Tamon; James Ashford; Matthew Nicholls; Marella F.T.R. de Bruijn; Aleksandr B. Sahakyan

Towards the genomic sequence code of DNA fragility for machine learning

NUCLEIC ACIDS RESEARCH

IF13.1

2024-10-23

OAAI

Pflughaupt, Patrick; Abdullah, Adib A.; Masuda, Kairi; Sahakyan, Aleksandr B.

Generalised interrelations among mutation rates drive the genomic compliance of Chargaff's second parity rule

NUCLEIC ACIDS RESEARCH

IF13.1

2023-06-09

OAAI

Pflughaupt, Patrick; Sahakyan, Aleksandr B.

Thermal and pH Stabilities of i-DNA: Confronting in vitro Experiments with Models and In-Cell NMR Data

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

IF16.9

2021-03-24

OAAI

Cheng, Mingpan; Qiu, Dehui; Tamon, Liezel; Istvankova, Eva; Viskova, Pavlina; Amrane, Samir; Guedin, Aurore; Chen, Jielin; Lacroix, Laurent; Ju, Huangxian; Trantirek, Lukas; Sahakyan, Aleksandr B.; Zhou, Jun; Mergny, Jean-Louis

Whole genome experimental maps of DNA G-quadruplexes in multiple species

NUCLEIC ACIDS RESEARCH

IF13.1

2019-03-20

260

OAAI

Marsico, Giovanni; Chambers, Vicki S.; Sahakyan, Aleksandr B.; McCauley, Patrick; Boutell, Jonathan M.; Di Antonio, Marco; Balasubramanian, Shankar

Structural analysis reveals the formation and role of RNA G-quadruplex structures in human mature microRNAs

CHEMICAL COMMUNICATIONS

IF4.2

2018-01-01

OAAI

Chan, Ka Lung; Peng, Boya; Umar, Mubarak I.; Chan, Chun-Yin; Sahakyan, Aleksandr B.; Le, Minh T. N.; Kwok, Chun Kit

Machine learning model for sequence-driven DNA G-quadruplex formation

SCIENTIFIC REPORTS

IF3.9

2017-11-06

109

OAAI

Sahakyan, Aleksandr B.; Chambers, Vicki S.; Marsico, Giovanni; Santner, Tobias; Di Antonio, Marco; Balasubramanian, Shankar

G-quadruplex structures within the 3′ UTR of LINE-1 elements stimulate retrotransposition

NATURE STRUCTURAL & MOLECULAR BIOLOGY

IF10.1

2017-01-30

OAAI

Sahakyan, Aleksandr B.; Murat, Pierre; Mayer, Clemens; Balasubramanian, Shankar

Single genome retrieval of context-dependent variability in mutation rates for human germline

BMC GENOMICS

IF3.7

2017-01-13

OAAI

Sahakyan, Aleksandr B.; Balasubramanian, Shankar

rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome

NATURE METHODS

IF32.1

2016-08-29

313

OAAI

Kwok, Chun Kit; Marsico, Giovanni; Sahakyan, Aleksandr B.; Chambers, Vicki S.; Balasubramanian, Shankar

Structural Analysis using SHALiPE to Reveal RNAG-Quadruplex Formation in Human Precursor MicroRNA

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

IF16.9

2016-06-29

OAAI

Kwok, Chun Kit; Sahakyan, Aleksandr B.; Balasubramanian, Shankar

Long genes and genes with multiple splice variants are enriched in pathways linked to cancer and other multigenic diseases

BMC GENOMICS

IF3.7

2016-03-12

OAAI

Sahakyan, Aleksandr B.; Balasubramanian, Shankar

Selective Chemical Labeling of Natural T Modifications in DNA

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

IF15.6

2015-05-12

OAAI

Hardisty, Robyn E.; Kawasaki, Fumiko; Sahakyan, Aleksandr B.; Balasubramanian, Shankar

Revealing the specific solute-solvent interactions via the measurements of the NMR spin-spin coupling constants

JOURNAL OF MOLECULAR STRUCTURE

IF4.7

2015-03-01

PREAI

Shahkhatuni, Astghik A.; Shahkhatuni, Aleksan G.; Minasyan, Nune S.; Panosyan, Henry A.; Sahakyan, Aleksandr B.

Cyclophilin A catalyzes proline isomerization by an electrostatic handle mechanism 亲环素A通过静电处理机理催化脯氨酸异构化

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2014-06-30

OAAI

Camilloni, Carlo; Sahakyan, Aleksandr B.; Holliday, Michael J.; Isern, Nancy G.; Zhang, Fengli; Eisenmesser, Elan Z.; Vendruscolo, Michele

ALMOST: An All Atom Molecular Simulation Toolkit for Protein Structure Determination 几乎: 用于蛋白质结构测定的全原子分子模拟工具包

JOURNAL OF COMPUTATIONAL CHEMISTRY

IF4.8

2014-03-27

PREAI

Fu, Biao; Sahakyan, Aleksandr B.; Camilloni, Carlo; Gaetano Tartaglia, Gian; Paci, Emanuele; Caflisch, Amedeo; Vendruscolo, Michele; Cavalli, Andrea

A Conformational Ensemble Derived Using NMR Methyl Chemical Shifts Reveals a Mechanical Clamping Transition That Gates the Binding of the HU Protein to DNA

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

IF15.6

2014-02-04

PREAI

Kannan, Arvind; Camilloni, Carlo; Sahakyan, Aleksandr B.; Cavalli, Andrea; Vendruscolo, Michele

A geometrical parametrization of C1′-C5′ RNA ribose chemical shifts calculated by density functional theory

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2013-07-15

PREAI

Suardiaz, Reynier; Sahakyan, Aleksandr B.; Vendruscolo, Michele

研究方向