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Extreme genome scrambling in marine planktonic Oikopleura dioica cryptic species Plessy, Charles; Mansfield, Michael J.; Bliznina, Aleksandra; Masunaga, Aki; West, Charlotte; Tan, Yongkai; Liu, Andrew W.; Grasic, Jan; Pisula, Maria Sara del Rio; Sanchez-Serna, Gaspar; Fabrega-Torrus, Marc; Ferrandez-Roldan, Alfonso; Roncalli, Vittoria; Navratilova, Pavla; Thompson, Eric M.; Onuma, Takeshi; Nishida, Hiroki; Canestro, Cristian; Luscombe, Nicholas M. 分享 收藏
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Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs de Hoon, Michiel; Bonetti, Alessandro; Plessy, Charles; Ando, Yoshinari; Hon, Chung-Chau; Ishizu, Yuri; Itoh, Masayoshi; Kato, Sachi; Lin, Dongyan; Maekawa, Sho; Murata, Mitsuyoshi; Nishiyori, Hiromi; Shin, Jay W.; Stolte, Jens; Suzuki, Ana Maria; Tagami, Michihira; Takahashi, Hazuki; Forrest, Alistair R. R.; Hayashizaki, Yoshihide; Kere, Juha; Carninci, Piero; Thongjuea, Supat 分享 收藏
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RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions (vol 11, 1018, 2020) Bonetti, Alessandro; Agostini, Federico; Suzuki, Ana Maria; Hashimoto, Kosuke; Pascarella, Giovanni; Gimenez, Juliette; Roos, Leonie; Nash, Alex J.; Ghilotti, Marco; Cameron, Christopher J. F.; Valentine, Matthew; Medvedeva, Yulia A.; Noguchi, Shuhei; Agirre, Eneritz; Kashi, Kaori; Samudyata; Luginbuehl, Joachim; Cazzoli, Riccardo; Agrawal, Saumya; Luscombe, Nicholas M.; Blanchette, Mathieu; Kasukawa, Takeya; de Hoon, Michiel; Arner, Erik; Lenhard, Boris; Plessy, Charles; Castelo-Branco, Goncalo; Orlando, Valerio; Carninci, Piero 分享 收藏
Investigation of the hepatic development in the coculture of hiPSCs-derived LSECs and HLCs in a fluidic microenvironment Danoy, Mathieu; Tauran, Yannick; Poulain, Stephane; Jellali, Rachid; Bruce, Johanna; Leduc, Marjorie; Le Gall, Morgane; Koui, Yuta; Arakawa, Hiroshi; Gilard, Francoise; Gakiere, Bertrand; Kato, Yukio; Plessy, Charles; Kido, Taketomo; Miyajima, Atsushi; Sakai, Yasuyuki; Leclerc, Eric 分享 收藏
Decoding Neuronal Diversification by Multiplexed Single-cell RNA-Seq Luginbuhl, Joachim; Kouno, Tsukasa; Nakano, Rei; Chater, Thomas E.; Sivaraman, Divya M.; Kishima, Mami; Roudnicky, Filip; Carninci, Piero; Plessy, Charles; Shin, Jay W. 分享 收藏
Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing 使用基于纳米孔的测序对来自冲绳的单个Oikopleura dioica的基因组进行端粒到端粒的组装 Bliznina, Aleksandra; Masunaga, Aki; Mansfield, Michael J.; Tan, Yongkai; Liu, Andrew W.; West, Charlotte; Rustagi, Tanmay; Chien, Hsiao-Chiao; Kumar, Saurabh; Pichon, Julien; Plessy, Charles; Luscombe, Nicholas M. 分享 收藏
Multi-omics analysis of hiPSCs-derived HLCs matured on-chip revealed patterns typical of liver regeneration Danoy, Mathieu; Tauran, Yannick; Poulain, Stephane; Jellali, Rachid; Bruce, Johanna; Leduc, Marjorie; Le Gall, Morgane; Gilard, Francoise; Kido, Taketomo; Arakawa, Hiroshi; Araya, Karin; Mori, Daiki; Kato, Yukio; Kusuhara, Hiroyuki; Plessy, Charles; Miyajima, Atsushi; Sakai, Yasuyuki; Leclerc, Eric 分享 收藏
Use of Cap Analysis Gene Expression to detect human papillomavirus promoter activity patterns at different disease stages Taguchi, Ayumi; Nagasaka, Kazunori; Plessy, Charles; Nakamura, Hiroe; Kawata, Yoshiko; Kato, Sachi; Hashimoto, Kosuke; Nagamatsu, Takeshi; Oda, Katsutoshi; Kukimoto, Iwao; Kawana, Kei; Carninci, Piero; Osuga, Yutaka; Fujii, Tomoyuki 分享 收藏
Integration of metabolomic and transcriptomic profiles of hiPSCs-derived hepatocytes in a microfluidic environment Danoy, Mathieu; Poulain, Stephane; Jelalli, Rachid; Gilard, Francoise; Kato, Sachi; Plessy, Charles; Kido, Taketomo; Miyajima, Atsushi; Sakai, Yasuyuki; Leclerc, Eric 分享 收藏
RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions Bonetti, Alessandro; Agostini, Federico; Suzuki, Ana Maria; Hashimoto, Kosuke; Pascarella, Giovanni; Gimenez, Juliette; Roos, Leonie; Nash, Alex J.; Ghilotti, Marco; Cameron, Christopher J. F.; Valentine, Matthew; Medvedeva, Yulia A.; Noguchi, Shuhei; Agirre, Eneritz; Kashi, Kaori; Samudyata; Luginbuhl, Joachim; Cazzoli, Riccardo; Agrawal, Saumya; Luscombe, Nicholas M.; Blanchette, Mathieu; Kasukawa, Takeya; de Hoon, Michiel; Arner, Erik; Lenhard, Boris; Plessy, Charles; Castelo-Branco, Goncalo; Orlando, Valerio; Carninci, Piero 分享 收藏
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Transcriptome profiling of hiPSC-derived LSECs with nanoCAGE Danoy, Mathieu; Poulain, Stephane; Koui, Yuta; Tauran, Yannick; Scheidecker, Benedikt; Kido, Taketomo; Miyajima, Atsushi; Sakai, Yasuyuki; Plessy, Charles; Leclerc, Eric 分享 收藏
Integration of metabolomic and transcriptomic profiling to compare two protocols of differentiation of human induced pluripotent stem cells into hepatocytes Jellali, Rachid; Poulain, Stephane; Bernier, Myriam Lereau; Gilard, Francoise; Tauran, Yannick; Kato, Sachi; Danoy, Mathieu; Segard, Bertrand David; Kido, Taketomo; Miyajima, Atsushi; Plessy, Charles; Sakai, Yasuyuki; Leclerc, Eric 分享 收藏
Optimized protocol for the hepatic differentiation of induced pluripotent stem cells in a fluidic microenvironment Danoy, Mathieu; Bernier, Myriam Lereau; Kimura, Keiichi; Poulain, Stephane; Kato, Sachi; Mori, Daiki; Kido, Taketomo; Plessy, Charles; Kusuhara, Hiroyuki; Miyajima, Atsushi; Sakai, Yasuyuki; Leclerc, Eric 分享 收藏
Profiling of derived-hepatocyte progenitors from induced pluripotent stem cells using nanoCAGE promoter analysis Bernier, Myriam Lereau; Poulain, Stephane; Tauran, Yannick; Danoy, Mathieu; Shinohara, Marie; Kimura, Keiichi; Segard, Bertrand David; Kato, Sachi; Kido, Taketomo; Miyajima, Atsushi; Sakai, Yasuyuki; Plessy, Charles; Leclerc, Eric 分享 收藏
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution Kouno, Tsukasa; Moody, Jonathan; Kwon, Andrew Tae-Jun; Shibayama, Youtaro; Kato, Sachi; Huang, Yi; Bottcher, Michael; Motakis, Efthymios; Mendez, Mickael; Severin, Jessica; Luginbuhl, Joachim; Abugessaisa, Imad; Hasegawa, Akira; Takizawa, Satoshi; Arakawa, Takahiro; Furuno, Masaaki; Ramalingam, Naveen; West, Jay; Suzuki, Harukazu; Kasukawa, Takeya; Lassmann, Timo; Hon, Chung-Chau; Arner, Erik; Carninci, Piero; Plessy, Charles; Shin, Jay W. 分享 收藏
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