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Altered chromatin landscape and 3D interactions associated with primary constitutional MLH1 epimutations Climent-Canto, Paula; Subirana-Granes, Marc; Ramos-Rodriguez, Mireia; Damaso, Estela; Marin, Fatima; Vara, Covadonga; Perez-Gonzalez, Beatriz; Raurell, Helena; Munte, Elisabet; Soto, Jose Luis; Alonso, Angel; Shin, Giwon; Ji, Hanlee; Hitchins, Megan; Capella, Gabriel; Pasquali, Lorenzo; Pineda, Marta 分享 收藏
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Spatial profiling of human colorectal cancer brain metastasis identifies chromosomal instability with adaptive niche cellular reorganization and reprograming Sathe, Anuja; Khan, Aparajita; Kang, Ji In; Meka, Rithika; Grimes, Susan M.; Luksik, Andrew S.; Lim, Michael; Petrisch, Claudia; Jackson, Christopher M.; Vogel, Hannes; Gephart, Melanie; Han, Summer; Ji, Hanlee P. 分享 收藏
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Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions Mason, Kaishu; Sathe, Anuja; Hess, Paul R.; Rong, Jiazhen; Wu, Chi-Yun; Furth, Emma; Susztak, Katalin; Levinsohn, Jonathan; Ji, Hanlee P.; Zhang, Nancy 分享 收藏
A clinical trial of therapeutic vaccination in lymphoma with serial tumor sampling and single-cell analysis 通过连续肿瘤采样和单细胞分析对淋巴瘤进行治疗性疫苗接种的临床试验 Shree, Tanaya; Haebe, Sarah; Czerwinski, Debra K.; Eckhert, Erik; Day, Grady; Sathe, Anuja; Grimes, Susan; Frank, Matthew J.; Maeda, Lauren S.; Alizadeh, Ash A.; Advani, Ranjana; Hoppe, Richard T.; Long, Steven R.; Martin, Brock; Ozawa, Michael G.; Khodadoust, Michael S.; Ji, Hanlee P.; Levy, Ronald 分享 收藏
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Single-cell multi-gene identification of somatic mutations and gene rearrangements in cancer 单细胞多基因鉴定癌症体细胞突变和基因重排 Grimes, Susan M.; Kim, Heon Seok; Roy, Sharmili; Sathe, Anuja; Ayala, Carlos, I; Bai, Xiangqi; Almeda-Notestine, Alison F.; Haebe, Sarah; Shree, Tanaya; Levy, Ronald; Lau, Billy T.; Ji, Hanlee P. 分享 收藏
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Pangenome graph construction from genome alignments with Minigraph-Cactus 用minigrap-cactus从基因组比对构建Pangenome图 Hickey, Glenn; Monlong, Jean; Ebler, Jana; Novak, Adam M.; Eizenga, Jordan M.; Gao, Yan; Marschall, Tobias; Li, Heng; Paten, Benedict; Abel, Haley J.; Antonacci-Fulton, Lucinda L.; Asri, Mobin; Baid, Gunjan; Baker, Carl A.; Belyaeva, Anastasiya; Billis, Konstantinos; Bourque, Guillaume; Buonaiuto, Silvia; Carroll, Andrew; Chaisson, Mark J. P.; Chang, Pi-Chuan; Chang, Xian H.; Cheng, Haoyu; Chu, Justin; Cody, Sarah; Colonna, Vincenza; Cook, Daniel E.; Cook-Deegan, Robert M.; Cornejo, Omar E.; Diekhans, Mark; Doerr, Daniel; Ebert, Peter; Ebler, Jana; Eichler, Evan E.; Eizenga, Jordan M.; Fairley, Susan; Fedrigo, Olivier; Felsenfeld, Adam L.; Feng, Xiaowen; Fischer, Christian; Flicek, Paul; Formenti, Giulio; Frankish, Adam; Fulton, Robert S.; Gao, Yan; Garg, Shilpa; Garrison, Erik; Garrison, Nanibaa' A.; Giron, Carlos Garcia; Green, Richard E.; Groza, Cristian; Guarracino, Andrea; Haggerty, Leanne; Hall, Ira M.; Harvey, William T.; Haukness, Marina; Haussler, David; Heumos, Simon; Hickey, Glenn; Hoekzema, Kendra; Hourlier, Thibaut; Howe, Kerstin; Jain, Miten; Jarvis, Erich D.; Ji, Hanlee P.; Kenny, Eimear E.; Koenig, Barbara A.; Kolesnikov, Alexey; Korbel, Jan O.; Kordosky, Jennifer; Koren, Sergey; Lee, HoJoon; Lewis, Alexandra P.; Liao, Wen-Wei; Lu, Shuangjia; Lu, Tsung-Yu; Lucas, Julian K.; Hugo, Magalhaes; Santiago, Marco-Sola; Marijon, Pierre; Markello, Charles; Marschall, Tobias; Martin, Fergal J.; McCartney, Ann; McDaniel, Jennifer; Miga, Karen H.; Mitchell, Matthew W.; Monlong, Jean; Mountcastle, Jacquelyn; Munson, Katherine M.; Mwaniki, Moses Njagi; Nattestad, Maria; Novak, Adam M.; Nurk, Sergey; Olsen, Hugh E.; Olson, Nathan D.; Pesout, Trevor; Phillippy, Adam M.; Popejoy, Alice B.; Porubsky, David; Prins, Pjotr; Puiu, Daniela; Rautiainen, Mikko; Regier, Allison A.; Rhie, Arang; Sacco, Samuel; Sanders, Ashley D.; Schneider, Valerie A.; Schultz, Baergen, I; Shafin, Kishwar; Sibbesen, Jonas A.; Siren, Jouni; Smith, Michael W.; Sofia, Heidi J.; Abou Tayoun, Ahmad N.; Thibaud-Nissen, Francoise; Tomlinson, Chad; Tricomi, Francesca Floriana; Villani, Flavia; Vollger, Mitchell R.; Wagner, Justin; Walenz, Brian; Wang, Ting; Wood, Jonathan M. D.; Zimin, Aleksey, V; Zook, Justin M. 分享 收藏
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