Donald C. Rio - Publications, H-index & Citations

Donald C. Rio

University of California Berkeley

59H指数

239论文数

1.2W被引数

收录论文 40

发表时间

Splicing accuracy varies across human introns, tissues, age and disease 剪接精确度在不同人类内含子、组织、年龄和疾病中存在差异。

NATURE COMMUNICATIONS

IF15.7

2025-01-27

OAAI

Garcia-Ruiz, S.; Zhang, D.; Gustavsson, E. K.; Rocamora-Perez, G.; Grant-Peters, M.; Fairbrother-Browne, A.; Reynolds, R. H.; Brenton, J. W.; Gil-Martinez, A. L.; Chen, Z.; Rio, D. C.; Botia, J. A.; Guelfi, S.; Collado-Torres, L.; Ryten, M.

Mutations in the hrp48 gene, which encodes a Drosophila heterogeneous nuclear ribonucleoprotein particle protein, cause lethality and developmental defects and affect P-element third-intron splicing in vivo

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-29

OAAI

Hammond, LE; Rudner, DZ; Kanaar, R; Rio, DC

RNA binding activity of heterodimeric splicing factor U2AF: at least one RS domain is required for high-affinity binding

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-28

OAAI

Rudner, DZ; Breger, KS; Kanaar, R; Adams, MD; Rio, DC

Drosophila melanogaster MNK/Chk2 and p53 regulate multiple DNA repair and apoptotic pathways following DNA damage

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-27

312

OAAI

Brodsky, MH; Weinert, BT; Tsang, G; Rong, YS; McGinnis, NM; Golic, KG; Rio, DC; Rubin, GM

Interaction between subunits of heterodimeric splicing factor U2AF is essential in vivo

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-27

OAAI

Rudner, DZ; Kanaar, R; Breger, KS; Rio, DC

Highly efficient generation of isogenic pluripotent stem cell models using prime editing

ELIFE

IF0

2022-09-07

OAAI

Li, Hanqin; Busquets, Oriol; Verma, Yogendra; Syed, Khaja Mohieddin; Kutnowski, Nitzan; Pangilinan, Gabriella R.; Gilbert, Luke A.; Bateup, Helen S.; Rio, Donald C.; Hockemeyer, Dirk; Soldner, Frank

Widespread intron retention impairs protein homeostasis in C9orf72 ALS brains

GENOME RESEARCH

IF5.5

2020-10-14

OAAI

Wang, Qingqing; Conlon, Erin G.; Manley, James L.; Rio, Donald C.

Structure of a P element transposase-DNA complex reveals unusual DNA structures and GTP-DNA contacts

NATURE STRUCTURAL & MOLECULAR BIOLOGY

IF10.1

2019-10-28

OAAI

Ghanim, George E.; Kellogg, Elizabeth H.; Nogales, Eva; Rio, Donald C.

Cryo-EM Structure of the P-Element Transposase Strand-Transfer Complex

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Kellogg, Elizabeth H.; Ghanim, George; Nogales, Eva; Rio, Donald C.

JUM is a computational method for comprehensive annotation-free analysis of alternative pre-mRNA splicing patterns

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2018-08-13

OAAI

Wang, Qingqing; Rio, Donald C.

Striking circadian neuron diversity and cycling of Drosophila alternative splicing

ELIFE

IF0

2018-06-04

OAAI

Wang, Qingqing; Abruzzi, Katharine C.; Rosbash, Michael; Rio, Donald C.

Drosophila IRBP bZIP heterodimer binds P-element DNA and affects hybrid dysgenesis

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2016-10-31

OAAI

Francis, Malik Joseph; Roche, Siobhan; Cho, Michael Jeffrey; Beall, Eileen; Min, Bosun; Panganiban, Ronaldo Paolo; Rio, Donald C.

The PSI-U1 snRNP interaction regulates male mating behavior in Drosophila

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2016-04-25

OAAI

Wang, Qingqing; Taliaferro, J. Matthew; Klibaite, Ugne; Hilgers, Valerie; Shaevitz, Joshua W.; Rio, Donald C.

Mechanisms and Regulation of Alternative Pre-mRNA Splicing

ANNUAL REVIEW OF BIOCHEMISTRY

IF0

2015-06-02

1.0K

OAAI

Lee, Yeon; Rio, Donald C.

A segmental genomic duplication generates a functional intron

NATURE COMMUNICATIONS

IF15.7

2011-08-30

OAAI

Hellsten, Uffe; Aspden, Julie L.; Rio, Donald C.; Rokhsar, Daniel S.

Identification and experimental validation of splicing regulatory elements in Drosophila melanogaster reveals functionally conserved splicing enhancers in metazoans

RNA

IF5

2011-08-24

OAAI

Brooks, Angela N.; Aspden, Julie L.; Podgornaia, Anna I.; Rio, Donald C.; Brenner, Steven E.

Distinct regulatory programs establish widespread sex-specific alternative splicing in Drosophila melanogaster

RNA

IF5

2011-01-13

OAAI

Hartmann, Britta; Castelo, Robert; Minana, Belen; Peden, Erin; Blanchette, Marco; Rio, Donald C.; Singh, Ravinder; Valcarcel, Juan

An SF1 affinity model to identify branch point sequences in human introns

NUCLEIC ACIDS RESEARCH

IF13.1

2010-11-10

OAAI

Pastuszak, Alexander W.; Joachimiak, Marcin P.; Blanchette, Marco; Rio, Donald C.; Brenner, Steven E.; Frankel, Alan D.

THAP proteins target specific DNA sites through bipartite recognition of adjacent major and minor grooves

NATURE STRUCTURAL & MOLECULAR BIOLOGY

IF10.1

2009-12-13

OAAI

Sabogal, Alex; Lyubimov, Artem Y.; Corn, Jacob E.; Berger, James M.; Rio, Donald C.

Genome-Wide Identification of Alternative Splice Forms Down-Regulated by Nonsense-Mediated mRNA Decay in Drosophila

PLOS GENETICS

IF3.7

2009-06-19

OAAI

Hansen, Kasper Daniel; Lareau, Liana F.; Blanchette, Marco; Green, Richard E.; Meng, Qi; Rehwinkel, Jan; Gallusser, Fabian L.; Izaurralde, Elisa; Rio, Donald C.; Dudoit, Sandrine; Brenner, Steven E.

研究方向