Václav Brázda - Publications, H-index & Citations

Václav Brázda

Institute of Biophysics

33H指数

162论文数

3.4K被引数

收录论文 48

发表时间

G‑quadruplexes as regulatory platforms for human transcription factors: insights from ChIP-seq data G-四链体作为人类转录因子的调控平台：来自ChIP-seq数据的见解

BMC Genomics

IF3.7

2026-07-29

OAAI

Karolína Drápalová; Michaela Dobrovolná; Filip Kledus; Jean-Louis Mergny; Václav Brázda

Study on the Binding of Five Plant-Derived Secondary Metabolites to G-Quadruplexes

ACS OMEGA

IF4.3

2026-01-01

PREAI

Vrtalova, Lucie; Dobrovolna, Michaela; Platero-Rochart, Daniel; Ptaszek, Aleksandra L.; Brazda, Vaclav; Sanchez-Murcia, Pedro A.

G-quadruplex motifs prediction and visualization in Sus scrofa genome 猪（Sus scrofa）基因组中G-四链体基序的预测与可视化

Genomics

IF3

2025-12-06

OAAI

Lucie Šislerová; Michal Petrovič; Michaela Dobrovolná; Jiří Šťastný; Tomaz Rozmaric; Helene Dworak; Libuše Kratochvilová; Lenka Veselá; Barbara Schädl; Florian Gruber; Johannes Grillari; Christian Freystätter; Mikolaj Ogrodnik; Václav Brázda

Z-DNA interaction proteins - insights from ChIP-seq data Z-DNA相互作用蛋白——来自ChIP-seq数据的见解

Biochemical and Biophysical Research Communications

IF2.2

2025-11-01

PREAI

Michaela Dobrovolná; Václav Brázda

High-Resolution Assembly of the Human Y Chromosome Identifies a Vast Landscape of Inverted Repeats Associated with Structural and Functional Genomic Features 高分辨率人类Y染色体组装识别与结构及功能基因组特征相关的大量反向重复序列

International Journal of Molecular Sciences 2025, Vol. 26, Page 10180

IF0

2025-10-20

OAAI

Michaela Dobrovolná; Richard P. Bowater; Petr Pečinka; Václav Brázda; Martin Bartas

Z-DNA Hunter tool for straightforward detection of Z-DNA forming regions and a case study in Drosophila Z-DNA Hunter工具用于直接检测Z-DNA形成区域及果蝇中的案例研究

NAR Genomics and Bioinformatics

IF2.8

2025-10-07

OAAI

Michal Petrovič; Martin Bartas; Alistair N Garratt; Petr Pečinka; Michaela Dobrovolná; Klára Koňaříková; Oldřich Trenz; Václav Brázda; Jiří Šťastný

mGem: Noncanonical nucleic acid structures-powerful but neglected antiviral targets mGem：非经典核酸结构——强大但被忽视的抗病毒靶点

MBIO

IF4.7

2025-09-01

PREAI

Brazda, Vaclav; Bowater, Richard P.; Pecinka, Petr; Bartas, Martin

Analysis of quadruplex propensity of aptamer sequences 分析适配体序列的四链体倾向性

NUCLEIC ACIDS RESEARCH

IF13.1

2025-05-16

OAAI

Cucchiarini, Anne; Dobrovolna, Michaela; Brazda, Vaclav; Mergny, Jean-Louis

Chromatin Immunoprecipitation Reveals p53 Binding to G-Quadruplex DNA Sequences in Myeloid Leukemia Cell Lines

ACS BIO & MED CHEM AU

IF4.3

2025-02-12

OAAI

Kratochvilova, Libuse; Dinova, Alessandra; Valkova, Natalia; Dobrovolna, Michaela; Sanchez-Murcia, Pedro A.; Brazda, Vaclav

Complete analysis of G-quadruplex forming sequences in the gapless assembly of human chromosome Y

BIOCHIMIE

IF3

2025-02-01

PREAI

Dobrovolna, Michaela; Mergny, Jean-Louis; Brazda, Vaclav

Inflammatory changes in the choroid plexus following subarachnoid hemorrhage: the role of innate immune receptors and inflammatory molecules

FRONTIERS IN CELLULAR NEUROSCIENCE

IF4

2025-01-07

OAAI

Solar, Peter; Brazda, Vaclav; Bares, Martin; Zamani, Alemeh; Emamiaref, Parisa; Joukal, Andrea; Kubickova, Lucie; Krocka, Erik; Hasanova, Klaudia; Joukal, Marek

Asymmetric distribution of G-quadruplex forming sequences in genomes of retroviruses 逆转录病毒基因组中G-四链体形成序列的不对称分布

SCIENTIFIC REPORTS

IF3.9

2025-01-02

OAAI

Kledus, Filip; Dobrovolna, Michaela; Mergny, Jean-Louis; Brazda, Vaclav

Complex Biophysical and Computational Analyses of G-Quadruplex Ligands: The Porphyrin Stacks Back

CHEMISTRY-A EUROPEAN JOURNAL

IF3.7

2024-11-03

OAAI

Satta, Giuseppe; Trajkovski, Marko; Cantara, Alessio; Mura, Monica; Meloni, Claudia; Olla, Giulia; Dobrovolna, Michaela; Pisano, Luisa; Gaspa, Silvia; Salis, Andrea; De Luca, Lidia; Mocci, Francesca; Brazda, Vaclav; Plavec, Janez; Carraro, Massimo

The influence of G-tract and loop length on the topological variability of putative five and six G-quartet DNA structures in the human genome

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

IF8.5

2024-11-01

OAAI

Stefan, Ursa; Brazda, Vaclav; Plavec, Janez; Marusic, Maja

G-quadruplex propensity in H. neanderthalensis, H. sapiens and Denisovans mitochondrial genomes

genomics proteomics bioinformatics

IF2.8

2024-05-30

OAAI

Brazda, Vaclav; Sislerova, Lucie; Cucchiarini, Anne; Mergny, Jean-Louis

DNA Quadruplex Structure with a Unique Cation Dependency 具有独特阳离子依赖性的DNA四链体结构

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

IF16.9

2024-01-15

OAAI

Gajarsky, Martin; Stadlbauer, Petr; Sponer, Jiri; Cucchiarini, Anne; Dobrovolna, Michaela; Brazda, Vaclav; Mergny, Jean-Louis; Trantirek, Lukas; Zivkovic, Martina Lenarcic

Abundance of G-Quadruplex Forming Sequences in the Hepatitis Delta Virus Genomes

ACS OMEGA

IF4.3

2024-01-09

OAAI

Brazda, Vaclav; Valkova, Natalia; Dobrovolna, Michaela; Mergny, Jean-Louis

Transactivation by partial function P53 family mutants is increased by the presence of G-quadruplexes at a promoter site

BIOCHIMIE

IF3

2024-01-01

PREAI

Vojsovic, Matus; Kratochvilova, Libuse; Valkova, Natalia; Sislerova, Lucie; El Rashed, Zeinab; Menichini, Paola; Inga, Alberto; Monti, Paola; Brazda, Vaclav

The presence of a G-quadruplex prone sequence upstream of a minimal promoter increases transcriptional activity in the yeast Saccharomyces cerevisiae

BIOSCIENCE REPORTS

IF4.7

2023-12-19

OAAI

Kratochvilova, Libuse; Vojsovic, Matus; Valkova, Natslia; Sislerova, Lucie; El Rashed, Zeinab; Inga, Alberto; Monti, Paola; Brazda, Vsclav

Quadruplexes and aging: G4-binding proteins regulate the presence of miRNA in small extracellular vesicles (sEVs)

BIOCHIMIE

IF3

2023-11-01

PREAI

Brazda, Vaclav; Mergny, Jean-Louis

研究方向