Nicholas Roehner - Publications, H-index & Citations

Nicholas Roehner

rtx bbn technologies, cambridge, massachusetts 02138, united states

21H指数

59论文数

1.3K被引数

收录论文 23

发表时间

GOLDBAR: A Framework for Combinatorial Biological Design GOLDBAR: 组合生物设计的框架

ACS SYNTHETIC BIOLOGY

IF3.9

2024-08-20

PREAI

Roehner, Nicholas; Roberts, James; Lapets, Andrei; Gould, Dany; Akavoor, Vidya; Qin, Lucy; Gordon, D. Benjamin; Voigt, Christopher; Densmore, Douglas

Ensemble Detection of DNA Engineering Signatures

ACS SYNTHETIC BIOLOGY

IF3.9

2024-03-12

PREAI

Adler, Aaron; Bader, Joel S.; Basnight, Brian; Booth, Benjamin W.; Cai, Jitong; Cho, Elizabeth; Collins, Joseph H.; Ge, Yuchen; Grothendieck, John; Keating, Kevin; Marshall, Tyler; Persikov, Anton; Scott, Helen; Siegelmann, Roy; Singh, Mona; Taggart, Allison; Toll, Benjamin; Wan, Kenneth H.; Wyschogrod, Daniel; Yaman, Fusun; Young, Eric M.; Celniker, Susan E.; Roehner, Nicholas

Standardized Representation of Parts and Assembly for Build Planning

ACS SYNTHETIC BIOLOGY

IF3.9

2023-11-13

PREAI

Beal, Jacob; Selvarajah, Vinoo; Chambonnier, Gael; Haddock, Traci; Vignoni, Alejandro; Vidal, Gonzalo; Roehner, Nicholas

Synthetic Biology Curation Tools (SYNBICT)

ACS SYNTHETIC BIOLOGY

IF3.9

2021-11-10

PREAI

Roehner, Nicholas; Mante, Jeanet; Myers, Chris J.; Beal, Jacob

Curation Principles Derived from the Analysis of the SBOL iGEM Data Set

ACS SYNTHETIC BIOLOGY

IF3.9

2021-09-21

OAAI

Mante, Jeanet; Roehner, Nicholas; Keating, Kevin; McLaughlin, James Alastair; Young, Eric; Beal, Jacob; Myers, Chris J.

Engineered yeast genomes accurately assembled from pure and mixed samples

NATURE COMMUNICATIONS

IF15.7

2021-03-05

OAAI

Collins, Joseph H.; Keating, Kevin W.; Jones, Trent R.; Balaji, Shravani; Marsan, Celeste B.; Como, Marina; Newlon, Zachary J.; Mitchell, Tom; Bartley, Bryan; Adler, Aaron; Roehner, Nicholas; Young, Eric M.

Capturing Multicellular System Designs Using Synthetic Biology Open Language (SBOL)

ACS SYNTHETIC BIOLOGY

IF3.9

2020-07-31

OAAI

Brown, Bradley; Bartley, Bryan; Beal, Jacob; Bird, Jasmine E.; Goni-Moreno, Angel; McLaughlin, James Alastair; Misirli, Goksel; Roehner, Nicholas; Skelton, David James; Poh, Chueh Loo; Ofiteru, Irina Dana; James, Katherine; Wipat, Anil

Specifying Combinatorial Designs with the Synthetic Biology Open Language (SBOL)

ACS SYNTHETIC BIOLOGY

IF3.9

2019-06-17

PREAI

Roehner, Nicholas; Bartley, Bryan; Beal, Jacob; McLaughlin, James; Pocock, Matthew; Zhang, Michael; Zundel, Zach; Myers, Chris J.

iBioSim 3: A Tool for Model-Based Genetic Circuit Design

ACS SYNTHETIC BIOLOGY

IF3.9

2018-06-26

PREAI

Watanabe, Leandro; Tramy Nguyen; Zhang, Michael; Zundel, Zach; Zhang, Zhen; Madsen, Curtis; Roehner, Nicholas; Myers, Chris

Needs and opportunities in bio-design automation: four areas for focus

CURRENT OPINION IN CHEMICAL BIOLOGY

IF6.1

2017-10-01

OAAI

Appleton, Evan; Densmore, Douglas; Madsen, Curtis; Roehner, Nicholas

Design Automation in Synthetic Biology

cold spring harbor perspectives in medicine

IF8.4

2017-02-28

OAAI

Appleton, Evan; Madsen, Curtis; Roehner, Nicholas; Densmore, Douglas

Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration (vol 45, pg 1567, 2017)

NUCLEIC ACIDS RESEARCH

IF13.1

2017-01-18

OAAI

Woodruff, Lauren B. A.; Gorochowski, Thomas E.; Roehner, Nicholas; Mikkelsen, Tarjei S.; Densmore, Douglas; Gordon, D. Benjamin; Nicol, Robert; Voigt, Christopher A.

Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration

NUCLEIC ACIDS RESEARCH

IF13.1

2016-12-21

OAAI

Woodruff, Lauren B. A.; Gorochowski, Thomas E.; Roehner, Nicholas; Mikkelsen, Tarjei S.; Densmore, Douglas; Gordon, D. Benjamin; Nicol, Robert; Voigt, Christopher A.

Sharing Structure and Function in Biological Design with SBOL 2.0

ACS SYNTHETIC BIOLOGY

IF3.9

2016-05-04

PREAI

Roehner, Nicholas; Beal, Jacob; Clancy, Kevin; Bartley, Bryan; Misirli, Goksel; Grunberg, Raik; Oberortner, Ernst; Pocock, Matthew; Bissell, Michael; Madsen, Curtis; Nguyen, Tramy; Zhang, Michael; Zhang, Zhen; Zundel, Zach; Densmore, Douglas; Gennari, John H.; Wipat, Anil; Sauro, Herbert M.; Myers, Chris J.

Double Dutch: A Tool for Designing Combinatorial Libraries of Biological Systems

ACS SYNTHETIC BIOLOGY

IF3.9

2016-05-03

PREAI

Roehner, Nicholas; Young, Eric M.; Voigt, Christopher A.; Gordon, D. Benjamin; Densmore, Douglas

A Converter from the Systems Biology Markup Language to the Synthetic Biology Open Language

ACS SYNTHETIC BIOLOGY

IF3.9

2016-01-12

PREAI

Nguyen, Tramy; Roehner, Nicholas; Zundel, Zach; Myers, Chris J.

A Framework for Genetic Logic Synthesis

PROCEEDINGS OF THE IEEE

IF25.9

2015-11-01

PREAI

Vaidyanathan, Prashant; Der, Bryan S.; Bhatia, Swapnil; Roehner, Nicholas; Silva, Ryan; Voigt, Christopher A.; Densmore, Douglas

Generating Systems Biology Markup Language Models from the Synthetic Biology Open Language

ACS SYNTHETIC BIOLOGY

IF3.9

2015-04-09

PREAI

Roehner, Nicholas; Zhang, Zhen; Nguyen, Tramy; Myers, Chris J.

Proposed Data Model for the Next Version of the Synthetic Biology Open Language

ACS SYNTHETIC BIOLOGY

IF3.9

2014-06-16

PREAI

Roehner, Nicholas; Oberortner, Ernst; Pocock, Matthew; Beal, Jacob; Clancy, Kevin; Madsen, Curtis; Misirli, Goksel; Wipat, Anil; Sauro, Herbert; Myers, Chris J.

The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology

NATURE BIOTECHNOLOGY

IF41.7

2014-06-06

232

OAAI

Galdzicki, Michal; Clancy, Kevin P.; Oberortner, Ernst; Pocock, Matthew; Quinn, Jacqueline Y.; Rodriguez, Cesar A.; Roehner, Nicholas; Wilson, Mandy L.; Adam, Laura; Anderson, J. Christopher; Bartley, Bryan A.; Beal, Jacob; Chandran, Deepak; Chen, Joanna; Densmore, Douglas; Endy, Drew; Gruenberg, Raik; Hallinan, Jennifer; Hillson, Nathan J.; Johnson, Jeffrey D.; Kuchinsky, Allan; Lux, Matthew; Misirli, Goksel; Peccoud, Jean; Plahar, Hector A.; Sirin, Evren; Stan, Guy-Bart; Villalobos, Alan; Wipat, Anil; Gennari, John H.; Myers, Chris J.; Sauro, Herbert M.

研究方向