Ram Samudrala - Publications, H-index & Citations

Ram Samudrala

University at Buffalo

46H指数

267论文数

8.4K被引数

收录论文 55

发表时间

QIIME2-based pooled re-analysis of 16s rRNA sequences reveals gut microbiota dysbiosis in diabetic nephropathy mouse models 基于QIIME2的16S rRNA序列合并重分析揭示了糖尿病肾病小鼠模型中的肠道菌群失调

Microbial Pathogenesis

IF3.5

2026-07-01

PREAI

Chopra, Chahat; Kukkar, Deepak; Kaur, Harsimran; Samudrala, Ram

Combining cutting edge computational and experimental methods for targeting KRAS mutations in non-small cell lung cancer 结合尖端计算和实验方法靶向非小细胞肺癌中的KRAS突变

Expert Opinion on Drug Discovery

IF4.9

2026-04-01

PREAI

Samudrala, Ram; Bruggemann, Liana; Falls, Zackary; Mahajan, Supriya D.

Deciphering bisphenol A (BPA)-elicited osteoarthritis mechanisms through network toxicology and molecular docking, then de novo generation of novel therapeutic candidates 通过网络毒理学和分子对接解析双酚A（BPA）诱导的骨关节炎机制，进而全新创制新型治疗候选药物

BMC Pharmacology and Toxicology

IF0

2025-12-17

OAAI

Sumei Xu; Liping Jiang; Zhuo Zhang; Xin Luo; Wei Wu; Huilan Wu; Zhichun Huang; Zackary Falls; Ram Samudrala; Zhirong Tan

Strategies for robust, accurate, and generalizable benchmarking of drug discovery platforms 药物发现平台鲁棒、准确且可推广的基准测试策略

BIOINFORMATICS

IF5.4

2025-11-01

PREAI

Van Norden, Melissa; Mangione, William; Falls, Zackary; Samudrala, Ram

Accurate informatic modeling of tooth enamel pellicle interactions by training substitution matrices with Mat4Pep 通过训练替换矩阵，利用Mat4Pep对牙釉质获得性膜相互作用进行精确的informatics建模

food frontiers

IF2.9

2024-12-20

OAAI

Keeper, Jeremy Horst; Seto, Jong; Oren, Ersin Emre; Horst, Orapin V.; Hung, Ling-Hong; Samudrala, Ram

The implications of APOBEC3-mediated C-to-U RNA editing for human disease

COMMUNICATIONS BIOLOGY

IF5.1

2024-05-04

OAAI

Van Norden, Melissa; Falls, Zackary; Mandloi, Sapan; Segal, Brahm H.; Baysal, Bora E.; Samudrala, Ram; Elkin, Peter L.

Antiviral Approaches against Influenza Virus

CLINICAL MICROBIOLOGY REVIEWS

IF19.3

2023-03-23

OAAI

Kumari, Rashmi; Sharma, Suresh D.; Kumar, Amrita; Ende, Zachary; Mishina, Margarita; Wang, Yuanyuan; Falls, Zackary; Samudrala, Ram; Pohl, Jan; Knight, Paul R.; Sambhara, Suryaprakash

The impact of nucleosome structure on CRISPR/Cas9 fidelity

NUCLEIC ACIDS RESEARCH

IF13.1

2023-02-02

OAAI

Handelmann, Christopher R.; Tsompana, Maria; Samudrala, Ram; Buck, Michael J.

Identifying Protein Features and Pathways Responsible for Toxicity Using Machine Learning and Tox21: Implications for Predictive Toxicology

MOLECULES

IF4.6

2022-05-08

OAAI

Moukheiber, Lama; Mangione, William; Moukheiber, Mira; Maleki, Saeed; Falls, Zackary; Gao, Mingchen; Samudrala, Ram

Proteomic Network Analysis of Bronchoalveolar Lavage Fluid in Ex-Smokers to Discover Implicated Protein Targets and Novel Drug Treatments for Chronic Obstructive Pulmonary Disease

PHARMACEUTICALS

IF4.8

2022-05-01

OAAI

Mammen, Manoj J.; Tu, Chengjian; Morris, Matthew C.; Richman, Spencer; Mangione, William; Falls, Zackary; Qu, Jun; Broderick, Gordon; Sethi, Sanjay; Samudrala, Ram

Accurate Prediction of Inhibitor Binding to HIV-1 Protease Using CANDOCK

FRONTIERS IN CHEMISTRY

IF4.2

2022-01-17

OAAI

Falls, Zackary; Fine, Jonathan; Chopra, Gaurav; Samudrala, Ram

Evaluating the performance of drug-repurposing technologies

DRUG DISCOVERY TODAY

IF7.5

2022-01-01

OAAI

Schuler, James; Falls, Zackary; Mangione, William; Hudson, Matthew L.; Bruggemann, Liana; Samudrala, Ram

A Deep-Learning Proteomic-Scale Approach for Drug Design 一种用于药物设计的深度学习蛋白质组学方法

PHARMACEUTICALS

IF4.8

2021-12-07

OAAI

Overhoff, Brennan; Falls, Zackary; Mangione, William; Samudrala, Ram

A synthetic small molecule stalls pre-mRNA splicing by promoting an early-stage U2AF2-RNA complex

CELL CHEMICAL BIOLOGY

IF7.2

2021-08-01

OAAI

Chatrikhi, Rakesh; Feeney, Callen F.; Pulvino, Mary J.; Alachouzos, Georgios; MacRae, Andrew J.; Falls, Zackary; Rai, Sumit; Brennessel, William W.; Jenkins, Jermaine L.; Walter, Matthew J.; Graubert, Timothy A.; Samudrala, Ram; Jurica, Melissa S.; Frontier, Alison J.; Kielkopf, Clara L.

Protein mimetic amyloid inhibitor potently abrogates cancer-associated mutant p53 aggregation and restores tumor suppressor function 蛋白质模拟淀粉样蛋白抑制剂有效消除癌症相关的突变型p53聚集并恢复肿瘤抑制功能

NATURE COMMUNICATIONS

IF15.7

2021-06-25

OAAI

Palanikumar, L.; Karpauskaite, Laura; Al-Sayegh, Mohamed; Chehade, Ibrahim; Alam, Maheen; Hassan, Sarah; Maity, Debabrata; Ali, Liaqat; Kalmouni, Mona; Hunashal, Yamanappa; Ahmed, Jemil; Houhou, Tatiana; Karapetyan, Shake; Falls, Zackary; Samudrala, Ram; Pasricha, Renu; Esposito, Gennaro; Afzal, Ahmed J.; Hamilton, Andrew D.; Kumar, Sunil; Magzoub, Mazin

Multiscale Virtual Screening Optimization for Shotgun Drug Repurposing Using the CANDO Platform

MOLECULES

IF4.6

2021-04-28

OAAI

Hudson, Matthew L.; Samudrala, Ram

Shotgun drug repurposing biotechnology to tackle epidemics and pandemics

DRUG DISCOVERY TODAY

IF7.5

2020-07-01

OAAI

Mangione, William; Falls, Zackary; Melendy, Thomas; Chopra, Gaurav; Samudrala, Ram