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An allosteric inhibitor of the Zika virus NS2B-NS3 protease with oral efficacy in mouse models

delete2026-02-10
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J
Jesus M. Ontoria *
E
Esther Torrente
A
Antonino Missineo
C
Cristina Alli
R
Rita Graziani
S
Silvia Conti
M
Monica Bisbocci
A
Antonio Quotadamo
F
Federica Ferrigno
A
Alessandra Corio
G
Giovanni Ievoli
L
Leda Bencheva
J
Jérôme Amaudrut
S
Silvana Vasile
E
Elisa Beghetto
C
Chantal Paolini
N
Nadine Alaimo
M
Maria Veneziano
M
Martina Nibbio
G
Giulia Proto
F
Fabrizio Colaceci
L
Laura Orsatti
V
Vincenzo Pucci
R
Romano Di Fabio
L
Licia Tomei
C
Christian Montalbetti
A
Alberto Bresciani
C
Carlo Toniatti
G
Giacomo Paonessa *
DOI:10.1038/s41467-026-68943-xdelete
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Abstract

Abstract

En 中文
The mosquito-transmitted Zika virus (ZIKV) poses a global health threat, with no approved antiviral drugs or vaccines currently available. Here, we report the discovery of a series of ZIKV NS3 protease inhibitors identified through phenotypic high-throughput screening (HTS) using a ZIKV replicon-based cellular assay, and the subsequent selection of resistant mutants. These inhibitors, characterized by the presence of an N-acylsydnone imine group, bind to a previously undescribed allosteric pocket of the protease, locking the enzyme into a catalytically inactive conformation. We describe the characterization of IRBM-Z-1, our initial allosteric hit and IRBM-Z-2, a potent inhibitor of ZIKV infectivity and other orthoflavivirus proteases with a favourable in vitro and in vivo ADME profile, resulting in oral efficacy against ZIKV infection in mouse models, with potential as a prophylactic agent for human use. The authors describe the discovery of a series of potent non-competitive allosteric inhibitors of the ZIKV NS2B-NS3 protease, which exhibit antiviral activity in vitro and robust oral efficacy against ZIKV infections in a mouse model.
Keywords:
Drug discovery and development
Target validation
X-ray crystallography
Science
Humanities and Social Sciences
multidisciplinary
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Journal

Nature Communications cover
Nature Communications
IF:
15.7
Papers:
9.2W
Citations:
91.2W

Organization

I
irbm
Scholars:
33
Papers: 5
Citations: 3