logo
CanyamAI summaries for academic research
language
MobileMobile
  • Phone FeatureWeChat Mini Program
EnglishEnglish
noticeNotice
BlogBlog
delete
arrow
Back
P

Pavel Skums

georgia state university

22H-index
176Paper Count
3.2KCitation Count
Published Papers 41
Publication Date
logo
Special Issue: 13th International Conference on Computational Advances in Bio and Medical Sciences
errJournal of Computational Biology
IF1.6
err2026-06-01
err0
PREAI
errAlser, Mohammed; Bansal, Mukul S.; Khudyakov, Yury; Mangul, Serghei; Mandoiu, Ion I.; Moussa, Marmar R.; Patterson, Murray; Rajasekaran, Sanguthevar; Skums, Pavel; Yooseph, Shibu; Zelikovsky, Alexander
errShare
errSave
SARS-CoV-2 wastewater genomic surveillance: approaches, challenges, and opportunities
errGenome Biology
IF9.4
err2026-01-12
err0
errOAAI
errViorel Munteanu; Michael A. Saldana; David Dreifuss; Wenhao O. Ouyang; Jannatul Ferdous; Fatemeh Mohebbi; Jessica Schlueter Roseberry; Dumitru Ciorba; Viorel Bostan; Victor Gordeev; Nicolae Drabcinski; Justin Maine Su; Nadiia Kasianchuk; Nitesh Kumar Sharma; Sergey Knyazev; Eva Aßmann; Andrei Lobiuc; Mihai Covasa; Keith A. Crandall; Nicholas C. Wu; Christopher E. Mason; Braden T. Tierney; Alexander G. Lucaci; Roel A. Ophoff; Cynthia Gibas; Piotr Rzymski; Pavel Skums; Helena Solo-Gabriele; Beerenwinkel Niko; Alex Zelikovsky; Martin Hölzer; Adam Smith; Serghei Mangul
errShare
errSave
Epistatic Density of Viral Variants in Acute and Chronic HCV Patients
errCOMPUTATIONAL ADVANCES IN BIO AND MEDICAL SCIENCES, ICCABS 2025
IF0
err2026-01-01
err0
PREAI
errNemira, Alina; Juyal, Akshay; Skums, Pavel; Zelikovsky, Alexander
errShare
errSave
Editorial: Special Section on Computational Advances in Bio and Medical Sciences
errIEEE Transactions on Computational Biology and Bioinformatics
IF0
err2025-12-10
err0
PREAI
errIon Mandoiu; Marmar Moussa; Sanguthevar Rajasekaran; Pavel Skums; Sharma V. Thankachan; Alex Zelikovsky
errShare
errSave
Clustering-based methodology for comparing multi-characteristic epidemiological dynamics with application to COVID-19 epidemiology in Europe
errROYAL SOCIETY OPEN SCIENCE
IF2.9
err2025-09-24
err0
PREAI
errKirpich, Alexander; Shishkin, Aleksandr; Lhewa, Pema; Adeniyi, Ezekiel; Norris, Michael; Chowell, Gerardo; Gankin, Yuriy; Skums, Pavel; Perez Tchernov, Alexander
errShare
errSave
A graph homomorphism approach for unraveling histories of metastatic cancers and viral outbreaks under evolutionary constraints
errNature Communications
IF15.7
err2025-08-28
err0
errOAAI
errKiril Kuzmin; Henri Schmidt; Maryam Kafi Kang; Sagi Snir; Benjamin J. Raphael; Pavel Skums
errShare
errSave
Investigating and forecasting infectious disease dynamics using epidemiological and molecular surveillance data
errPHYSICS OF LIFE REVIEWS
IF14.3
err2024-12-01
err0
PREAI
errChowell, Gerardo; Skums, Pavel
errShare
errSave
Early detection of emerging viral variants through analysis of community structure of coordinated substitution networks
errNATURE COMMUNICATIONS
IF15.7
err2024-04-02
err3
errOAAI
errMohebbi, Fatemeh; Zelikovsky, Alex; Mangul, Serghei; Chowell, Gerardo; Skums, Pavel
errShare
errSave
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2023-11-01
err0
errOAAI
errCai, Zhipeng; Li, Min; Skums, Pavel; Wei, Yanjie
errShare
errSave
Excess mortality in Ukraine during the course of COVID-19 pandemic in 2020-2021
errSCIENTIFIC REPORTS
IF3.9
err2023-04-27
err2
errOAAI
errShishkin, Aleksandr; Lhewa, Pema; Yang, Chen; Gankin, Yuriy; Chowell, Gerardo; Norris, Michael; Skums, Pavel; Kirpich, Alexander
errShare
errSave
SOPHIE: Viral outbreak investigation and transmission history reconstruction in a joint phylogenetic and network theory framework
errCELL SYSTEMS
IF7.7
err2022-10-01
err3
errOAAI
errSkums, Pavel; Mohebbi, Fatemeh; Tsyvina, Vyacheslav; Baykal, Pelin Icer; Nemira, Alina; Ramachandran, Sumathi; Khudyakov, Yury
errShare
errSave
Unlocking capacities of genomics for the COVID-19 response and future pandemics
errNATURE METHODS
IF32.1
err2022-04-08
err32
errOAAI
errKnyazev, Sergey; Chhugani, Karishma; Sarwal, Varuni; Ayyala, Ram; Singh, Harman; Karthikeyan, Smruthi; Deshpande, Dhrithi; Baykal, Pelin Icer; Comarova, Zoia; Lu, Angela; Porozov, Yuri; Vasylyeva, Tetyana, I; Wertheim, Joel O.; Tierney, Braden T.; Chiu, Charles Y.; Sun, Ren; Wu, Aiping; Abedalthagafi, Malak S.; Pak, Victoria M.; Nagaraj, Shivashankar H.; Smith, Adam L.; Skums, Pavel; Pasaniuc, Bogdan; Komissarov, Andrey; Mason, Christopher E.; Bortz, Eric; Lemey, Philippe; Kondrashov, Fyodor; Beerenwinkel, Niko; Lam, Tommy Tsan-Yuk; Wu, Nicholas C.; Zelikovsky, Alex; Knight, Rob; Crandall, Keith A.; Mangul, Serghei
errShare
errSave
Excess mortality in Belarus during the COVID-19 pandemic as the case study of a country with limited non-pharmaceutical interventions and limited reporting
errSCIENTIFIC REPORTS
IF3.9
err2022-03-31
err14
errOAAI
errKirpich, Alexander; Shishkin, Aleksandr; Weppelmann, Thomas A.; Tchernov, Alexander Perez; Skums, Pavel; Gankin, Yuriy
errShare
errSave
An investigation of spatial-temporal patterns and predictions of the coronavirus 2019 pandemic in Colombia, 2020-2021
errPLOS NEGLECTED TROPICAL DISEASES
IF3.4
err2022-03-04
err7
errOAAI
errTariq, Amna; Chakhaia, Tsira; Dahal, Sushma; Ewing, Alexander; Hua, Xinyi; Ofori, Sylvia K.; Prince, Olaseni; Salindri, Argita D.; Adeniyi, Ayotomiwa Ezekiel; Banda, Juan M.; Skums, Pavel; Luo, Ruiyan; Lara-Diaz, Leidy Y.; Burger, Raimund; Fung, Isaac Chun-Hai; Shim, Eunha; Kirpich, Alexander; Srivastava, Anuj; Chowell, Gerardo
errShare
errSave
Computational Approaches to Detect Illicit Drug Ads and Find Vendor Communities Within Social Media Platforms
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2022-01-01
err2
PREAI
errZhao, Fengpan; Skums, Pavel; Zelikovsky, Alex; Sevigny, Eric L.; Swahn, Monica Haavisto; Strasser, Sheryl M.; Huang, Yan; Wu, Yubao
errShare
errSave
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2022-01-01
err0
errOAAI
errCai, Zhipeng; Narasimhan, Giri; Skums, Pavel
errShare
errSave
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2022-01-01
err0
errOAAI
errCai, Zhipeng; Li, Min; Skums, Pavel
errShare
errSave
SARS-CoV-2 transmission dynamics in Belarus in 2020 revealed by genomic and incidence data analysis
errCOMMUNICATIONS MEDICINE
IF6.3
err2021-09-16
err6
errOAAI
errNemira, Alina; Adeniyi, Ayotomiwa Ezekiel; Gasich, Elena L.; Bulda, Kirill Y.; Valentovich, Leonid N.; Krasko, Anatoly G.; Glebova, Olga; Kirpich, Alexander; Skums, Pavel
errShare
errSave
Technology dictates algorithms: recent developments in read alignment
errGENOME BIOLOGY
IF9.4
err2021-08-26
err64
errOAAI
errAlser, Mohammed; Rotman, Jeremy; Deshpande, Dhrithi; Taraszka, Kodi; Shi, Huwenbo; Baykal, Pelin Icer; Yang, Harry Taegyun; Xue, Victor; Knyazev, Sergey; Singer, Benjamin D.; Balliu, Brunilda; Koslicki, David; Skums, Pavel; Zelikovsky, Alex; Alkan, Can; Mutlu, Onur; Mangul, Serghei
errShare
errSave
Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction
errNUCLEIC ACIDS RESEARCH
IF13.1
err2021-07-02
err37
errOAAI
errKnyazev, Sergey; Tsyvina, Viachaslau; Shankar, Anupama; Melnyk, Andrew; Artyomenko, Alexander; Malygina, Tatiana; Porozov, Yuri B.; Campbell, Ellsworth M.; Switzer, William M.; Skums, Pavel; Mangul, Serghei; Zelikovsky, Alex
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
R
Rob Knight
H-index: 255 · Papers: 1.8K
F
Fabian J. Theis
H-index: 125 · Papers: 1.1K
J
Jan O. Korbel
H-index: 117 · Papers: 447
赵宏宇 cover
赵宏宇 (Hongyu Zhao)
H-index: 115 · Papers: 1.4K
S
Samuel Aparício
H-index: 115 · Papers: 473
View more