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Woody Sherman

psivant therapeutics, 451 d street, boston, massachusetts 02210, united states

58H-index
141Paper Count
2.3WCitation Count
Published Papers 83
Publication Date
A novel approach for first-in-human dose selection using population dose-response modelling to find a minimum anticipated biological effect level
err2025-04-27
err0
PREAI
errLin Yuan; Meghana Kulkarni; Evan Chiswick; Cheryl Koh; Peter Sandy; Salah Nabhan; Woody Sherman; Melissa Johnson; Judy Wang; Gerald Falchook; Jennifer Johnson; Christopher Winter; Humphrey Gardner; Arijit Chakravarty; Madison Stoddard
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Non-Markovian Dynamic Models Identify Non-Canonical KRAS-VHL Encounter Complex Conformations for Novel PROTAC Design
errJACS AU
IF8.7
err2024-09-24
err0
errOAAI
errQiu, Yunrui; Wiewiora, Rafal P.; Izaguirre, Jesus A.; Xu, Huafeng; Sherman, Woody; Tang, Weiping; Huang, Xuhui
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ACEGEN: Reinforcement Learning of Generative Chemical Agents for Drug Discovery
err2024-08-02
err2
errOAAI
errBou, Albert; Thomas, Morgan; Dittert, Sebastian; Navarro, Carles; Majewski, Maciej; Wang, Ye; Patel, Shivam; Tresadern, Gary; Ahmad, Mazen; Moens, Vincent; Sherman, Woody; Sciabola, Simone; De Fabritiis, Gianni
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STORMM: Structure and topology replica molecular mechanics for chemical simulations
err2024-07-15
err0
errOAAI
errCerutti, David S.; Wiewiora, Rafal; Boothroyd, Simon; Sherman, Woody
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Performance and Analysis of the Alchemical Transfer Method for Binding-Free-Energy Predictions of Diverse Ligands
err2023-12-26
err7
errOAAI
errChen, Lieyang; Wu, Yujie; Wu, Chuanjie; Silveira, Ana; Sherman, Woody; Xu, Huafeng; Gallicchio, Emilio
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Targeted Protein Degradation: Advances, Challenges, and Prospects for Computational Methods
err2023-08-21
err18
errOAAI
errMostofian, Barmak; Martin, Holli-Joi; Razavi, Asghar; Patel, Shivam; Allen, Bryce; Sherman, Woody; Izaguirre, Jesus A.
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Predicting the structural basis of targeted protein degradation by integrating molecular dynamics simulations with structural mass spectrometry
err2022-10-06
err38
errOAAI
errDixon, Tom; MacPherson, Derek; Mostofian, Barmak; Dauzhenka, Taras; Lotz, Samuel; McGee, Dwight; Shechter, Sharon; Shrestha, Utsab R.; Wiewiora, Rafal; McDargh, Zachary A.; Pei, Fen; Pal, Rajat; Ribeiro, Joao V.; Wilkerson, Tanner; Sachdeva, Vipin; Gao, Ning; Jain, Shourya; Sparks, Samuel; Li, Yunxing; Vinitsky, Alexander; Zhang, Xin; Razavi, Asghar M.; Kolossvary, Istvan; Imbriglio, Jason; Evdokimov, Artem; Bergeron, Louise; Zhou, Wenchang; Adhikari, Jagat; Ruprecht, Benjamin; Dickson, Alex; Xu, Huafeng; Sherman, Woody; Izaguirre, Jesus A.
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Precise Binding Free Energy Calculations for Multiple Molecules Using an Optimal Measurement Network of Pairwise Differences
err2021-12-06
err9
errOAAI
errLi, Pengfei; Li, Zhijie; Wang, Yu; Dou, Huaixia; Radak, Brian K.; Allen, Bryce K.; Sherman, Woody; Xu, Huafeng
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Accounting for the Central Role of Interfacial Water in Protein-Ligand Binding Free Energy Calculations
err2020-11-18
err21
errOAAI
errBen-Shalom, Ido Y.; Lin, Zhixiong; Radak, Brian K.; Lin, Charles; Sherman, Woody; Gilson, Michael K.
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Alchemical Binding Free Energy Calculations in AMBER20: Advances and Best Practices for Drug Discovery
err2020-09-16
err229
errOAAI
errLee, Tai-Sung; Allen, Bryce K.; Giese, Timothy J.; Guo, Zhenyu; Li, Pengfei; Lin, Charles; McGee, T. Dwight, Jr.; Pearlman, David A.; Radak, Brian K.; Tao, Yujun; Tsai, Hsu-Chun; Xu, Huafeng; Sherman, Woody; York, Darrin M.
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Improved Alchemical Free Energy Calculations with Optimized Smoothstep Softcore Potentials
err2020-07-16
err49
errOAAI
errLee, Tai-Sung; Lin, Zhixiong; Allen, Bryce K.; Lin, Charles; Radak, Brian K.; Tao, Yujun; Tsai, Hsu-Chun; Sherman, Woody; York, Darrin M.
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Rigorous Free Energy Simulations in Virtual Screening
err2020-06-16
err127
errOAAI
errCournia, Zoe; Allen, Bryce K.; Beuming, Thijs; Pearlman, David A.; Radak, Brian K.; Sherman, Woody
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Mechanism of biomolecular recognition of trimethyllysine by the fluorinated aromatic cage of KDM5A PHD3 finger
err2020-06-01
err15
errOAAI
errPieters, Bas J. G. E.; Wuts, Maud H. M.; Poater, Jordi; Kumar, Kiran; White, Paul B.; Kamps, Jos J. A. G.; Sherman, Woody; Pruijn, Ger J. M.; Paton, Robert S.; Beuming, Thijs; Bickelhaupt, F. Matthias; Mecinovic, Jasmin
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True small molecule STING agonist generates systemic and potent anti-tumor immunity required for effective cancer immunotherapy
err2019-12-01
err0
PREAI
errKulkarni, Meghana M.; Dwight, Timothy; Marino, Kristen; Allen, Bryce K.; Taimi, Mohammed; Bastos, Cecilia; Lai, Sujen; Koh, Cheryl; Samant, Ramya; Tesar, Bethany; Huang, Huang; Chamberlain, Brian; Rice, James M.; Tan, Dazhi; Lin, Zhixiong; Shechter, Sharon; Li, Stella; Sparks, Sam; Soutter, Holly; Swann, Steven; Sherman, Woody; Winter, Christopher
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On the Rational Design of Zeolite Clusters for Converging Reaction Barriers: Quantum Study of Aldol Kinetics Confined in HZSM-5
err2018-09-14
err9
PREAI
errMigues, Angela N.; Sun, Qinfang; Vaitheeswaran, S.; Sherman, Woody; Auerbach, Scott M.
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A Water-Bridged Cysteine-Cysteine Redox Regulation Mechanism in Bacterial Protein Tyrosine Phosphatases
errCHEM
IF19.6
err2017-10-01
err15
errOAAI
errBertoldo, Jean B.; Rodrigues, Tiago; Dunsmore, Lavinia; Aprile, Francesco A.; Marques, Marta C.; Rosado, Leonardo A.; Boutureira, Omar; Steinbrecher, Thomas B.; Sherman, Woody; Corzana, Francisco; Terenzi, Hernan; Bernardes, Goncalo J. L.
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