arrow
Back

马剑竹 (Jianzhu Ma)

Tsinghua University

34H-index
203Paper Count
6.5KCitation Count
Published Papers 33
Publication Date
Dango: Predicting higher-order genetic interactions
err2026-04-24
err0
PREAI
errRuochi Zhang; Mihir Bafna; Jianzhu Ma; Jian Ma
errShare
errSave
Author Correction: Peptide design through binding interface mimicry with PepMimic
err2025-10-27
err0
errOAAI
errXiangzhe Kong; Rui Jiao; Haowei Lin; Ruihan Guo; Wenbing Huang; Wei-Ying Ma; Zihua Wang; Yang Liu; Jianzhu Ma
errShare
errSave
A neural symbolic model for space physics
err2025-10-15
err0
PREAI
errJie Ying; Haowei Lin; Chao Yue; Yajie Chen; Chao Xiao; Quanqi Shi; Yitao Liang; Shing-Tung Yau; Yuan Zhou; Jianzhu Ma
errShare
errSave
Peptide design through binding interface mimicry with PepMimic
err2025-10-01
err0
PREAI
errXiangzhe Kong; Rui Jiao; Haowei Lin; Ruihan Guo; Wenbing Huang; Wei-Ying Ma; Zihua Wang; Yang Liu; Jianzhu Ma
errShare
errSave
Pisces: A multi-modal data augmentation approach for drug combination synergy prediction
err2025-06-03
err0
errOAAI
errHanwen Xu; Jiacheng Lin; Addie Woicik; Zixuan Liu; Jianzhu Ma; Sheng Zhang; Hoifung Poon; Liewei Wang; Sheng Wang
errShare
errSave
Large-scale foundation model on single-cell transcriptomics
err2024-06-06
err27
PREAI
errHao, Minsheng; Gong, Jing; Zeng, Xin; Liu, Chiming; Guo, Yucheng; Cheng, Xingyi; Wang, Taifeng; Ma, Jianzhu; Zhang, Xuegong; Song, Le
errShare
errSave
Scientific Computing with Diffractive Optical Neural Networks
err2023-10-08
err2
errOAAI
errChen, Ruiyang; Tang, Yingheng; Ma, Jianzhu; Gao, Weilu
errShare
errSave
Extrapolating heterogeneous time-series gene expression data using Sagittarius
err2023-06-22
err1
errOAAI
errWoicik, Addie; Zhang, Mingxin; Chan, Janelle; Ma, Jianzhu; Wang, Sheng
errShare
errSave
Characterizing the interaction conformation between T-cell receptors and epitopes with deep learning
err2023-03-27
err15
PREAI
errPeng, Xingang; Lei, Yipin; Feng, Peiyuan; Jia, Lemei; Ma, Jianzhu; Zhao, Dan; Zeng, Jianyang
errShare
errSave
Device-System End-to-End Design of Photonic Neuromorphic Processor Using Reinforcement Learning
err2022-12-01
err2
errOAAI
errTang, Yingheng; Zamani, Princess Tara; Chen, Ruiyang; Ma, Jianzhu; Qi, Minghao; Yu, Cunxi; Gao, Weilu
errShare
errSave
Boosting single-cell gene regulatory network reconstruction via bulk-cell transcriptomic data
err2022-09-07
err4
PREAI
errShu, Hantao; Ding, Fan; Zhou, Jingtian; Xue, Yexiang; Zhao, Dan; Zeng, Jianyang; Ma, Jianzhu
errShare
errSave
Single-cell multiomics analysis reveals regulatory programs in clear cell renal cell carcinoma
err2022-07-19
err48
errOAAI
errLong, Zhilin; Sun, Chengfang; Tang, Min; Wang, Yin; Ma, Jiayan; Yu, Jichuan; Wei, Jingchao; Ma, Jianzhu; Wang, Bohan; Xie, Qi; Wen, Jiaming
errShare
errSave
MobilePrune: Neural Network Compression via l0 Sparse Group Lasso on the Mobile System
errSENSORS
IF3.5
err2022-05-27
err2
errOAAI
errShao, Yubo; Zhao, Kaikai; Cao, Zhiwen; Peng, Zhehao; Peng, Xingang; Li, Pan; Wang, Yijie; Ma, Jianzhu
errShare
errSave
Physics-informed recurrent neural network for time dynamics in optical resonances
err2022-03-28
err17
errOAAI
errTang, Yingheng; Fan, Jichao; Li, Xinwei; Ma, Jianzhu; Qi, Minghao; Yu, Cunxi; Gao, Weilu
errShare
errSave
Quantifying the spatial homogeneity of urban road networks via graph neural networks
err2022-03-23
err48
PREAI
errXue, Jiawei; Jiang, Nan; Liang, Senwei; Pang, Qiyuan; Yabe, Takahiro; Ukkusuri, Satish, V; Ma, Jianzhu
errShare
errSave
Deep learning guided optimization of human antibody against SARS-CoV-2 variants with broad neutralization
err2022-03-01
err59
errOAAI
errShan, Sisi; Luo, Shitong; Yang, Ziqing; Hong, Junxian; Su, Yufeng; Ding, Fan; Fu, Lili; Li, Chenyu; Chen, Peng; Ma, Jianzhu; Shi, Xuanling; Zhang, Qi; Berger, Bonnie; Zhang, Linqi; Peng, Jian
errShare
errSave
ParsVNN: parsimony visible neural networks for uncovering cancer-specific and drug-sensitive genes and pathways
err2021-10-27
err15
errOAAI
errHuang, Xiaoqing; Huang, Kun; Johnson, Travis; Radovich, Milan; Zhang, Jie; Ma, Jianzhu; Wang, Yijie
errShare
errSave

Research Directions

人工智能、系统生物学、生物制药、智慧医疗Nature Science Cell及子刊生物论文单细胞多组学分析透明细胞肾细胞癌调控程序细胞结构多尺度制图蛋白质图像与相互作用融合基因调控网络建模药物反应预测药物协同作用预测表观遗传学跨生物上下文的药物响应预测模型Nature Cancer 2020数据驱动生物本体可见机器学习在生物医学中的应用Cell 2018 co-first authorTyping tumorssomatic evolution深度学习细胞层次结构与功能建模Nature Methods 2018近期人工智能会议及期刊论文抗原特异性抗体设计扩散生成模型优化元强化学习基于偏好的快速适应神经网络压缩COVID-19预测社会感知分析生物序列设计分子采样蛋白质口袋分子连接器设计点集分析等变学习神经能量最小化用于分子构象优化Neural PredictingHigher-order PatternsTemporal NetworksSpatial Homogeneity of Urban Road Networks基于结构的药物设计三维生成模型受限结构生成线性收敛智能手机认证蛋白质序列比对图神经网络图结构优化因果机器学习因果推理深度神经网络