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VIRUS-MVP: a framework for comprehensive surveillance of viral mutations and their functional impacts Anwar, Muhammad Zohaib; Gill, Ivan S.; Iseminger, Madeline; Sehar, Anoosha; Griffiths, Emma J.; Dooley, Damion; Duan, Jun; Vora, Khushi; Van Domselaar, Gary; Brinkman, Fiona S. L.; Gordon, Paul M. K.; Hsiao, William W. L. Share Save
From fetus to 8: the CHILD Cohort Study Miliku, Kozeta; Reyna, Myrtha E.; Medeleanu, Maria; Dai, Ruixue; Dubeau, Aimee; Lefebvre, Diana L.; Wright, Kim; Dawod, Bassel; Beck, Marshall; Brooks, Elissa; Kobor, Michael; Duan, Qingling; Brook, Jeffrey R.; Lou, Wendy; Brinkman, Fiona S. L.; Winsor, Geoffrey L.; Cook, Justin; Becker, Allan B.; Simons, Elinor; Mandhane, Piushkumar J.; Moraes, Theo J.; Azad, Meghan B.; Sears, Malcolm R.; Turvey, Stuart E.; Subbarao, Padmaja Share Save
Exploring the potential mediating role of systemic antibiotics in the association between early-life lower respiratory tract infections and asthma at age 5 in the CHILD study Medeleanu, Maria V.; Reyna, Myrtha E.; Dai, Darlene L. Y.; Winsor, Geoffrey L.; Brinkman, Fiona S. L.; Verma, Rahul; Nugent, Ella; Riaz, Nashita; Simons, Elinor; Mandhane, Piushkumar J.; Azad, Meghan B.; Turvey, Stuart E.; Moraes, Theo J.; Subbarao, Padmaja Share Save
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CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database Alcock, Brian P.; Huynh, William; Chalil, Romeo; Smith, Keaton W.; Raphenya, Amogelang R.; Wlodarski, Mateusz A.; Edalatmand, Arman; Petkau, Aaron; Syed, Sohaib A.; Tsang, Kara K.; Baker, Sheridan J. C.; Dave, Mugdha; McCarthy, Madeline C.; Mukiri, Karyn M.; Nasir, Jalees A.; Golbon, Bahar; Imtiaz, Hamna; Jiang, Xingjian; Kaur, Komal; Kwong, Megan; Liang, Zi Cheng; Niu, Keyu C.; Shan, Prabakar; Yang, Jasmine Y. J.; Gray, Kristen L.; Hoad, Gemma R.; Jia, Baofeng; Bhando, Timsy; Carfrae, Lindsey A.; Farha, Maya A.; French, Shawn; Gordzevich, Rodion; Rachwalski, Kenneth; Tu, Megan M.; Bordeleau, Emily; Dooley, Damion; Griffiths, Emma; Zubyk, Haley L.; Brown, Eric D.; Maguire, Finlay; Beiko, Robert G.; Hsiao, William W. L.; Brinkman, Fiona S. L.; Van Domselaar, Gary; McArthur, Andrew G. Share Save
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Exploring the mobilome and resistome of Enterococcus faecium in a One Health context across two continents Sanderson, Haley; Gray, Kristen L.; Manuele, Alexander; Maguire, Finlay; Khan, Amjad; Liu, Chaoyue; Rudrappa, Chandana Navanekere; Nash, John H. E.; Robertson, James; Bessonov, Kyrylo; Oloni, Martins; Alcock, Brian P.; Raphenya, Amogelang R.; McAllister, Tim A.; Peacock, Sharon J.; Raven, Kathy E.; Gouliouris, Theodore; McArthur, Andrew G.; Brinkman, Fiona S. L.; Fink, Ryan C.; Zaheer, Rahat; Beiko, Robert G. Share Save
Enabling genomic island prediction and comparison in multiple genomes to investigate bacterial evolution and outbreaks Bertelli, Claire; Gray, Kristen L.; Woods, Nolan; Lim, Adrian C.; Tilley, Keith E.; Winsor, Geoffrey L.; Hoad, Gemma R.; Roudgar, Ata; Spencer, Adam; Peltier, James; Warren, Derek; Raphenya, Amogelang R.; McArthur, Andrew G.; Brinkman, Fiona S. L. Share Save
Composition and Associations of the Infant Gut Fungal Microbiota with Environmental Factors and Childhood Allergic Outcomes Boutin, Rozlyn C. T.; Sbihi, Hind; McLaughlin, Ryan J.; Hahn, Aria S.; Konwar, Kishori M.; Loo, Rachelle S.; Dai, Darlene; Petersen, Charisse; Brinkman, Fiona S. L.; Winsor, Geoffrey L.; Sears, Malcolm R.; Moraes, Theo J.; Becker, Allan B.; Azad, Meghan B.; Mandhane, Piush J.; Subbarao, Padmaja; Turvey, Stuart E.; Finlay, B. Brett Share Save
Bacterial cyclic diguanylate signaling networks sense temperature Almblad, Henrik; Randall, Trevor E.; Liu, Fanny; Leblanc, Katherine; Groves, Ryan A.; Kittichotirat, Weerayuth; Winsor, Geoffrey L.; Fournier, Nicolas; Au, Emily; Groizeleau, Julie; Rich, Jacquelyn D.; Lou, Yuefei; Granton, Elise; Jennings, Laura K.; Singletary, Larissa A.; Winstone, Tara M. L.; Good, Nathan M.; Bumgarner, Roger E.; Hynes, Michael F.; Singh, Manu; Stietz, Maria Silvina; Brinkman, Fiona S. L.; Kumar, Ayush; Brassinga, Ann Karen Cornelia; Parsek, Matthew R.; Tseng, Boo Shan; Lewis, Ian A.; Yipp, Bryan G.; MacCallum, Justin L.; Harrison, Joe Jonathan Share Save
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Decreasing antibiotic use, the gut microbiota, and asthma incidence in children: evidence from population-based and prospective cohort studies Patrick, David M.; Sbihi, Hind; Dai, Darlene L. Y.; Al Mamun, Abdullah; Rasali, Drona; Rose, Caren; Marra, Fawziah; Boutin, Rozlyn C. T.; Petersen, Charisse; Stiemsma, Leah T.; Winsor, Geoffrey L.; Brinkman, Fiona S. L.; Kozyrskyj, Anita L.; Azad, Meghan B.; Becker, Allan B.; Mandhane, Piush J.; Moraes, Theo J.; Sears, Malcolm R.; Subbarao, Padmaja; Finlay, B. Brett; Turvey, Stuart E. Share Save
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AB569, a nontoxic chemical tandem that kills major human pathogenic bacteria McDaniel, Cameron T.; Panmanee, Warunya; Winsor, Geoffrey L.; Gill, Erin; Bertelli, Claire; Schurr, Michael J.; Dongare, Prateek; Paul, Andrew T.; Ko, Seung-Hyun B.; Lau, Gee W.; Dasgupta, Nupur; Bogue, Amy L.; Miller, William E.; Mortensen, Joel E.; Haslam, David B.; Dexheimer, Phillip; Muruve, Daniel A.; Aronow, Bruce J.; Forbes, Malcolm D. E.; Danilczuk, Marek; Brinkman, Fiona S. L.; Hancock, Robert E. W.; Meyer, Thomas J.; Hassett, Daniel J. Share Save
CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database Alcock, Brian P.; Raphenya, Amogelang R.; Lau, Tammy T. Y.; Tsang, Kara K.; Bouchard, Megane; Edalatmand, Arman; Huynh, William; Nguyen, Anna-Lisa, V; Cheng, Annie A.; Liu, Sihan; Min, Sally Y.; Miroshnichenko, Anatoly; Tran, Hiu-Ki; Werfalli, Rafik E.; Nasir, Jalees A.; Oloni, Martins; Speicher, David J.; Florescu, Alexandra; Singh, Bhavya; Faltyn, Mateusz; Hernandez-Koutoucheva, Anastasia; Sharma, Arjun N.; Bordeleau, Emily; Pawlowski, Andrew C.; Zubyk, Haley L.; Dooley, Damion; Griffiths, Emma; Maguire, Finlay; Winsor, Geoff L.; Beiko, Robert G.; Brinkman, Fiona S. L.; Hsiao, William W. L.; Domselaar, Gary, V; McArthur, Andrew G. Share Save
FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration Dooley, Damion M.; Griffiths, Emma J.; Gosal, Gurinder S.; Buttigieg, Pier L.; Hoehndorf, Robert; Lange, Matthew C.; Schriml, Lynn M.; Brinkman, Fiona S. L.; Hsiao, William W. L. Share Save
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