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Tim van Opijnen

Broad Institute of MIT and Harvard

35H-index
104Paper Count
4.8KCitation Count
Published Papers 41
Publication Date
Dual CRISPRi-seq for genome-wide genetic interaction studies identifies key genes involved in the pneumococcal cell cycle
err2025-10-03
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errOAAI
errJulien Dénéréaz; Elise Eray; Bimal Jana; Vincent de Bakker; Horia Todor; Tim van Opijnen; Xue Liu; Jan-Willem Veening
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Cell-selective multiplexed bioorthogonal noncanonical amino acid tagging for nascent proteomics
err2025-10-02
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PREAI
errConor Loynd; Soumya Jyoti Singha Roy; Sarah E. Canarelli; Daniel W. Bak; Bharathi Sundaresh; Zachary Babbitz; Tim van Opijnen; Eranthie Weerapana; Abhishek Chatterjee
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Identification of determinants that allow maintenance of high-level fluoroquinolone resistance in Acinetobacter baumannii
errMBIO
IF4.7
err2025-01-08
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errOAAI
errHamami, Efrat; Huo, Wenwen; Hernandez-Bird, Juan; Castaneda, Arnold; Bai, Jinna; Syal, Sapna; Ortiz-Marquez, Juan C.; van Opijnen, Tim; Geisinger, Edward; Isberg, Ralph R.
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Diclofenac sensitizes multi-drug resistant Acinetobacter baumannii to colistin
err2024-11-21
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errOAAI
errBisaro, Fabiana; Jackson-Litteken, Clay D.; Mcguffey, Jenna C.; Hooppaw, Anna J.; Bodrog, Sophie; Jebeli, Leila; Janet-Maitre, Manon; Ortiz-Marquez, Juan C.; van Opijnen, Tim; Scott, Nichollas E.; Di Venanzio, Gisela; Feldman, Mario F.
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Directed Evolution of a Bacterial Leucyl tRNA in Mammalian Cells for Enhanced Noncanonical Amino Acid Mutagenesis
err2024-06-21
err4
errOAAI
errHuang, Rachel L.; Jewel, Delilah; Kelemen, Rachel E.; Pham, Quan; Yared, Tarah J.; Wang, Shu; Singha Roy, Soumya Jyoti; Huang, Zeyi; Levinson, Samantha D.; Sundaresh, Bharathi; Miranda, Suyen Espinoza; van Opijnen, Tim; Chatterjee, Abhishek
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Covalent Inhibition of a Host-Pathogen Protein-Protein Interaction Reduces the Infectivity of Streptococcus pneumoniae
errJACS AU
IF8.7
err2024-06-20
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errOAAI
errLyu, Yuhan; Yang, Fan; Sundaresh, Bharathi; Rosconi, Federico; van Opijnen, Tim; Gao, Jianmin
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Dual membrane- spanning anti-sigma factors regulate vesiculation in Bacteroides thetaiotaomicron
err2024-02-29
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errOAAI
errPardue, Evan J.; Sartorio, Mariana G.; Jana, Biswanath; Scott, Nichollas E.; Beatty, Wandy L.; Ortiz-Marquez, Juan C.; Van Opijnen, Tim; Hsu, Fong-Fu; Potter, Robert F.; Feldman, Mario F.; Silhavy, Thomas
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Streptococcus pneumoniae favors tolerance via metabolic adaptation over resistance to circumvent fluoroquinolones
errMBIO
IF4.7
err2024-02-14
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errOAAI
errDao, Tina H.; Echlin, Haley; Mcknight, Abigail; Marr, Enolia S.; Junker, Julia; Jia, Qidong; Hayden, Randall; van Opijnen, Tim; Isberg, Ralph R.; Cooper, Vaughn S.; Rosch, Jason W.
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Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis
err2024-01-26
err10
errOAAI
errJewel, Delilah; Kelemen, Rachel E.; Huang, Rachel L.; Zhu, Zeyu; Sundaresh, Bharathi; Malley, Kaitlin; Pham, Quan; Loynd, Conor; Huang, Zeyi; van Opijnen, Tim; Chatterjee, Abhishek
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Droplet Tn-Seq identifies the primary secretion mechanism for yersiniabactin in Yersinia pestis
err2023-07-28
err1
errOAAI
errPrice, Sarah L.; Thibault, Derek; Garrison, Taylor M.; Brady, Amanda; Guo, Haixun; Kehl-Fie, Thomas E.; Garneau-Tsodikova, Sylvie; Perry, Robert D.; van Opijnen, Tim; Lawrenz, Matthew B.
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Genome-wide phage susceptibility analysis in Acinetobacter baumannii reveals capsule modulation strategies that determine phage infectivity
err2023-06-08
err11
errOAAI
errBai, Jinna; Raustad, Nicole; Denoncourt, Jason; van Opijnen, Tim; Geisinger, Edward
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Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells
err2022-12-22
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errOAAI
errJewel, Delilah; Kelemen, Rachel E. E.; Huang, Rachel L. L.; Zhu, Zeyu; Sundaresh, Bharathi; Cao, Xiaofu; Malley, Kaitlin; Huang, Zeyi; Pasha, Muhammad; Anthony, Jon; van Opijnen, Tim; Chatterjee, Abhishek
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Interspecies recombination, not de novo mutation, maintains virulence after (3-lactam resistance acquisition in Streptococcus pneumoniae
err2022-12-01
err4
errOAAI
errNishimoto, Andrew T.; Dao, Tina H.; Jia, Qidong; Ortiz-Marquez, Juan C.; Echlin, Haley; Vogel, Peter; van Opijnen, Tim; Rosch, Jason W.
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The Phenylacetic Acid Catabolic Pathway Regulates Antibiotic and Oxidative Stress Responses in Acinetobacter
errMBIO
IF4.7
err2022-06-28
err26
errOAAI
errHooppaw, Anna J.; McGuffey, Jenna C.; Di Venanzio, Gisela; Ortiz-Marquez, Juan C.; Weber, Brent S.; Lightly, Tasia Joy; van Opijnen, Tim; Scott, Nichollas E.; Cardona, Silvia T.; Feldman, Mario F.
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A genome-wide atlas of antibiotic susceptibility targets and pathways to tolerance
err2022-06-07
err20
errOAAI
errLeshchiner, Dmitry; Rosconi, Federico; Sundaresh, Bharathi; Rudmann, Emily; Ramirez, Luisa Maria Nieto; Nishimoto, Andrew T.; Wood, Stephen J.; Jana, Bimal; Bujan, Noemi; Li, Kaicheng; Gao, Jianmin; Frank, Matthew; Reeve, Stephanie M.; Lee, Richard E.; Rock, Charles O.; Rosch, Jason W.; van Opijnen, Tim
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Yersinia pseudotuberculosis doxycycline tolerance strategies include modulating expression of genes involved in cell permeability and tRNA modifications
err2022-05-16
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errOAAI
errAlvarez-Manzo, Hector S.; Davidson, Robert K.; de Wyels, Jasper Van Cauwelaert; Cotten, Katherine L.; Nguyen, Benjamin H.; Xiao, Melody; Zhu, Zeyu; Anthony, Jon; van Opijnen, Tim; Davis, Kimberly Michele
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Targeted control of pneumolysin production by a mobile genetic element in Streptococcus pneumoniae
err2022-04-26
err5
errOAAI
errStevens, Emily J.; Morse, Daniel J.; Bonini, Dora; Duggan, Seana; Brignoli, Tarcisio; Recker, Mario; Lees, John A.; Croucher, Nicholas J.; Bentley, Stephen; Wilson, Daniel J.; Earle, Sarah G.; Dixon, Robert; Nobbs, Angela; Jenkinson, Howard; van Opijnen, Tim; Thibault, Derek; Wilkinson, Oliver J.; Dillingham, Mark S.; Carlile, Simon; McLoughlin, Rachel M.; Massey, Ruth C.
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Rapid, Multianalyte Detection of Opioid Metabolites in Wastewater
err2022-02-24
err24
errOAAI
errKumar, Narendra; Rana, Muhit; Geiwitz, Michael; Khan, Niazul Islam; Catalano, Matthew; Ortiz-Marquez, Juan C.; Kitadai, Hikari; Weber, Andrew; Dweik, Badawi; Ling, Xi; van Opijnen, Tim; Argun, Avni A.; Burch, Kenneth S.
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Host-informed therapies for the treatment of pneumococcal pneumonia
err2021-10-01
err5
PREAI
errSundaresh, Bharathi; Xu, Shuying; Noonan, Brian; Mansour, Michael K.; Leong, John M.; van Opijnen, Tim
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Antibiotic susceptibility signatures identify potential antimicrobial targets in the Acinetobacter baumannii cell envelope (vol 11, 4522, 2020)
err2020-11-24
err1
errOAAI
errGeisinger, Edward; Mortman, Nadav J.; Dai, Yunfei; Cokol, Murat; Syal, Sapna; Farinha, Andrew; Fisher, Delaney G.; Tang, Amy Y.; Lazinski, David W.; Wood, Stephen; Anthony, Jon; van Opijnen, Tim; Isberg, Ralph R.
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