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Alexander V. Predeus

wellcome sanger institute

29H-index
130Paper Count
3.0KCitation Count
Published Papers 40
Publication Date
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A Hormone Cell Atlas maps the human endocrine system at cellular resolution
errScience
IF45.8
err2026-05-28
err0
PREAI
errLijiang Fei; Isabel Huang-Doran; Katherine Lawler; Yizhou Yu; Jan Patrick Pett; Kevin M. Méndez-Acevedo; Dinesh Shah; Jaume Margalef-Rieres; Joseph S. Pohlman; Batuhan Cakir; Madelyn R. Moy; Robert G. Legg; Chuan Xu; Ken To; Duy Pham; Alexander V. Predeus; Ruth Hanssen; Tessa M. Cacciottolo; Rakesh K. Kapuge; Krzysztof Polanski; Amanda J. Oliver; Sarah A. Teichmann; I. Sadaf Farooqi
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Generation of biologically responsive colon-like intestinal tissue patches from human induced pluripotent stem cells using a rapid co-differentiation platform
errStem Cell Research & Therapy
IF7.3
err2026-04-09
err0
errOAAI
errWilliam Dalleywater; Alexander V. Predeus; Batuhan Cakir; Pavel Mazin; Jayakumar Vadakekolathu; Sergio Rutella; Marian L. Meakin; Alison A. Ritchie; Shamir Montazid; Sara Cuevas Ocaña; Nadine Holmes; Victoria Wright; Fei Sang; Silvia Santoni; Adam Bills; Declan Sculthorpe; Rasa Elmentaite; Sarah A. Teichmann; Shazia Irshad; Ian Tomlinson; Andrew Silver; Ricky D. Wildman; Nicholas R. F. Hannan; Felicity R. A. J. Rose; Mohammad Ilyas
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errSave
Spatiotemporal cellular map of the developing human reproductive tract
errNature
IF48.5
err2025-12-17
err0
errOAAI
errValentina Lorenzi; Cecilia Icoresi-Mazzeo; Charlotte Cassie; Nadav Yayon; Elias R. Ruiz-Morales; Carmen Sancho-Serra; Ryan Colligan; Frederick C. K. Wong; Magda Marečková; Elizabeth Tuck; Kenny Roberts; Tong Li; Marc-Antoine Jacques; James Ashcroft; Xiaoling He; Berta Crespo; Batuhan Cakir; Simon Murray; Yong Gu; Alexander V. Predeus; Martin Prete; Iva Kelava; Roger Barker; Luz Garcia-Alonso; John C. Marioni; Roser Vento-Tormo
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errSave
Functional Determinants and Evolutionary Consequences of Pleiotropy in Complex and Mendelian Traits
errMOLECULAR BIOLOGY AND EVOLUTION
IF5.3
err2025-10-01
err0
errOAAI
errBarbitoff, Yury A.; Bogaichuk, Polina M.; Pavlova, Nadezhda S.; Malysheva, Polina, V; Predeus, Alexander, V
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errSave
A single-cell and spatial genomics atlas of human skin fibroblasts reveals shared disease-related fibroblast subtypes across tissues
errNature Immunology
IF27.6
err2025-09-24
err0
errOAAI
errLloyd Steele; Bayanne Olabi; Kenny Roberts; Pavel V. Mazin; Simon Koplev; Catherine Tudor; Benjamin Rumney; Chloe Admane; Treasa Jiang; Donovan Correa-Gallegos; Keerthi Priya Chakala; Aljes Binkevich; Nusayhah Hudaa Gopee; Alexander Predeus; Martin Prete; Elena Winheim; Karl Annusver; Agnes Forsthuber; Luc Francis; Sophie Frech; Clarisse Ganier; Thomas Layton; Yingzi Liu; Hao Yuan; Johann E. Gudjonsson; Beate M. Lichtenberger; Satveer Mahil; Jagdeep Nanchahal; Edel A. O’Toole; Maksim V. Plikus; Yuval Rinkevich; Emanuel Rognoni; Catherine H. Smith; Sarah A. Teichmann; Maria Kasper; April R. Foster; Mohammad Lotfollahi; Muzlifah Haniffa
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Single-cell transcriptomics identifies chondrocyte differentiation dynamics in vivo and in vitro
errDevelopmental Cell
IF8.7
err2025-07-24
err0
errOAAI
errJohn E.G. Lawrence; Steven Woods; Kenny Roberts; Dinithi Sumanaweera; Petra Balogh; Tong Li; Alexander V. Predeus; Peng He; Krzysztof Polanski; Elena Prigmore; Elizabeth Tuck; Lira Mamanova; Di Zhou; Simone Webb; Laura Jardine; Xiaoling He; Roger A. Barker; Muzlifah Haniffa; Adrienne M. Flanagan; Matthew J. Young; Sam Behjati; Omer Bayraktar; Susan J. Kimber; Sarah A. Teichmann
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LMNA R482L mutation causes impairments in C2C12 myoblasts subpopulations, alterations in metabolic reprogramming during differentiation, and oxidative stress
errSCIENTIFIC REPORTS
IF3.9
err2025-02-13
err0
errOAAI
errIvanova, Oksana A.; Predeus, Alexander V.; Sorokina, Margarita Y.; Ignatieva, Elena V.; Bobkov, Danila E.; Sukhareva, Kseniia S.; Kostareva, Anna A.; Dmitrieva, Renata I.
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Potential links between human bloodstream infection by Salmonella enterica serovar Typhimurium and international transmission to Colombia
errPLOS NEGLECTED TROPICAL DISEASES
IF3.4
err2025-01-28
err0
errOAAI
errLi, Yan; Pulford, Caisey V.; Diaz, Paula; Perez-Sepulveda, Blanca M.; Duarte, Carolina; Predeus, Alexander V.; Wiesner, Magdalena; Heavens, Darren; Low, Ross; Schudoma, Christian; Montano, Angeline; Hall, Neil; Moreno, Jaime; Hinton, Jay C. D.
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CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-11-28
err4
errOAAI
errAbdulla, Shibla; Aevermann, Brian; Assis, Pedro; Badajoz, Seve; Bell, Sidney M.; Bezzi, Emanuele; Cakir, Batuhan; Chaffer, Jim; Chambers, Signe; Cherry, J. Michael; Chi, Tiffany; Chien, Jennifer; Dorman, Leah; Garcia-Nieto, Pablo; Gloria, Nayib; Hastie, Mim; Hegeman, Daniel; Hilton, Jason; Huang, Timmy; Infeld, Amanda; Istrate, Ana-Maria; Jelic, Ivana; Katsuya, Kuni; Kim, Yang Joon; Liang, Karen; Lin, Mike; Lombardo, Maximilian; Marshall, Bailey; Martin, Bruce; Mcdade, Fran; Megill, Colin; Patel, Nikhil; Predeus, Alexander; Raymor, Brian; Robatmili, Behnam; Rogers, Dave; Rutherford, Erica; Sadgat, Dana; Shin, Andrew; Small, Corinn; Smith, Trent; Sridharan, Prathap; Tarashansky, Alexander; Tavares, Norbert; Thomas, Harley; Tolopko, Andrew; Urisko, Meghan; Yan, Joyce; Yeretssian, Garabet; Zamanian, Jennifer; Mani, Arathi; Cool, Jonah; Carr, Ambrose
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errSave
Expanding the Russian allele frequency reference via cross-laboratory data integration: insights from 7452 exome samples
errNATIONAL SCIENCE REVIEW
IF17.1
err2024-09-14
err2
errOAAI
errBarbitoff, Yury A.; Khmelkova, Darya N.; Pomerantseva, Ekaterina A.; Slepchenkov, Aleksandr, V; Zubashenko, Nikita A.; Mironova, Irina, V; Kaimonov, Vladimir S.; Polev, Dmitrii E.; Tsay, Victoria V.; Glotov, Andrey S.; Aseev, Mikhail, V; Shcherbak, Sergey G.; Glotov, Oleg S.; Isaev, Arthur A.; Predeus, Alexander, V
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Modulation of Salmonella virulence by a novel SPI-2 injectisome effector that interacts with the dystrophin-associated protein complex
errMBIO
IF4.7
err2024-07-17
err1
errOAAI
errYu, Xiu-Jun; Xie, Haixia; Li, Yan; Liu, Mei; Hou, Ruhong; Predeus, Alexander V.; Sepulveda, Blanca M. Perez; Hinton, Jay C. D.; Holden, David W.; Thurston, Teresa L. M.
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Single-cell and spatially resolved interactomics of tooth-associated keratinocytes in periodontitis
errNATURE COMMUNICATIONS
IF15.7
err2024-06-14
err3
errOAAI
errEaster, Quinn T.; Matuck, Bruno Fernandes; Stark, German Beldorati; Worth, Catherine L.; Predeus, Alexander V.; Fremin, Brayon; Huynh, Khoa; Ranganathan, Vaishnavi; Ren, Zhi; Pereira, Diana; Rupp, Brittany T.; Weaver, Theresa; Miller, Kathryn; Perez, Paola; Hasuike, Akira; Chen, Zhaoxu; Bush, Mandy; Qu, Xufeng; Lee, Janice; Randell, Scott H.; Wallet, Shannon M.; Sequeira, Ines; Koo, Hyun; Tyc, Katarzyna M.; Liu, Jinze; Ko, Kang I.; Teichmann, Sarah A.; Byrd, Kevin M.
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errSave
Acute response to pathogens in the early human placenta at single-cell resolution
errCELL SYSTEMS
IF7.7
err2024-05-01
err4
errOAAI
errHoo, Regina; Ruiz-Morales, Elias R.; Kelava, Iva; Rawat, Mukul; Mazzeo, Cecilia Icoresi; Tuck, Elizabeth; Sancho-Serra, Carmen; Chelaghma, Sara; Predeus, Alexander, V; Murray, Simon; Fernandez-Antoran, David; Waller, Ross F.; Alvarez-Errico, Damiana; Lee, Marcus C. S.; Vento-Tormo, Roser
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Bioinformatics of germline variant discovery for rare disease diagnostics: current approaches and remaining challenges
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-01-23
err3
errOAAI
errBarbitoff, Yury A.; Ushakov, Mikhail O.; Lazareva, Tatyana E.; Nasykhova, Yulia A.; Glotov, Andrey S.; Predeus, Alexander, V
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Author affiliations: a; bc; d; ef g h; i jnd k
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2024-01-02
err13
errOAAI
errGanier, Clarisse; Mazin, Pavel; Herrera-Oropeza, Gabriel; Du-Harpur, Xinyi; Blakeley, Matthew; Gabriel, Jeyrroy; Predeus, Alexander, V; Cakir, Batuhan; Prete, Martin; Harun, Nasrat; Darrigrand, Jean-Francois; Haiser, Alexander; Wyles, Saranya; Shaw, Tanya; Teichmann, Sarah A.; Haniffa, Muzlifah; Watt, Fiona M.; Lynch, Magnus D.
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Genome- wide fitness analysis identifies genes required for in vitro growth and macrophage infection by African and global epidemic pathovariants of Salmonella enterica Enteritidis
errMICROBIAL GENOMICS
IF4
err2023-05-23
err5
errOAAI
errFong, Wai Yee; Canals, Rocio; Predeus, Alexander, V; Perez-Sepulveda, Blanca; Wenner, Nicolas; Lora, Lizeth Lacharme-; Feasey, Nicholas; Wigley, Paul; Hinton, Jay C. D.
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Transcriptomic profiling of Escherichia coli K-12 in response to a compendium of stressors (vol 8, 8788, 2022)
errSCIENTIFIC REPORTS
IF3.9
err2022-10-07
err0
errOAAI
errBhatia, Rama P.; Kirit, Hande A.; Predeus, Alexander V.; Bollback, Jonathan P.
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Transcriptomic profiling of Escherichia coli K-12 in response to a compendium of stressors
errSCIENTIFIC REPORTS
IF3.9
err2022-05-24
err18
errOAAI
errBhatia, Rama P.; Kirit, Hande A.; Predeus, Alexander V.; Bollback, Jonathan P.
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Systematic benchmark of state-of-the-art variant calling pipelines identifies major factors affecting accuracy of coding sequence variant discovery
errBMC GENOMICS
IF3.7
err2022-02-22
err39
errOAAI
errBarbitoff, Yury A.; Abasov, Ruslan; Tvorogova, Varvara E.; Glotov, Andrey S.; Predeus, Alexander V.
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An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes
errGENOME BIOLOGY
IF9.4
err2021-12-21
err20
errOAAI
errPerez-Sepulveda, Blanca M.; Heavens, Darren; Pulford, Caisey, V; Predeus, Alexander, V; Low, Ross; Webster, Hermione; Dykes, Gregory F.; Schudoma, Christian; Rowe, Will; Lipscombe, James; Watkins, Chris; Kumwenda, Benjamin; Shearer, Neil; Costigan, Karl; Baker, Kate S.; Feasey, Nicholas A.; Hinton, Jay C. D.; Hall, Neil
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Research Directions

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Co-authors
Cooperation Journals
S
Sarah A. Teichmann
H-index: 141 · Papers: 677
I
Ian Tomlinson
H-index: 129 · Papers: 1.3K
F
FamilariMary (Fiona M. Watt)
H-index: 127 · Papers: 682
R
Roger A. Barker
H-index: 122 · Papers: 956
I
I. Sadaf Farooqi
H-index: 105 · Papers: 462
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