Hirak Sarkar - Publications, H-index & Citations

Hirak Sarkar

princeton university

16H指数

94论文数

2.5K被引数

收录论文 9

发表时间

Joint imputation and deconvolution of gene expression across spatial transcriptomics platforms 基因表达在空间转录组学平台上的联合插补与反卷积

GENOME RESEARCH

IF5.5

2025-12-01

PREAI

Zheng, Hongyu; Sarkar, Hirak; Raphael, Benjamin J.

Tumors hijack macrophages for iron supply to promote bone metastasis and anemia 肿瘤劫持巨噬细胞以提供铁来促进骨转移和贫血

Cell

IF42.5

2025-09-03

PREAI

Yujiao Han; Hirak Sarkar; Zhan Xu; Sereno Lopez-Darwin; Yong Wei; Xiang Hang; Fengshuo Liu; Kimberley Tran; Wei Wang; Jennifer M. Miller; Christina J. DeCoste; Dylan S. Blohm; Robert L. Satcher; Xiang H.-F. Zhang; Yibin Kang

Deciphering normal and cancer stem cell niches by spatial transcriptomics: opportunities and challenges 通过空间转录组学解析正常与癌症干细胞微环境：机遇与挑战

GENES & DEVELOPMENT

IF7.7

2024-11-04

OAAI

Sarkar, Hirak; Lee, Eunmi; Lopez-Darwin, Sereno L.

Single-cell analyses of metastatic bone marrow in human neuroblastoma reveals microenvironmental remodeling and metastatic

JCI INSIGHT

IF6.1

2024-02-15

OAAI

Mei, Shenglin; Alchahin, Adele M.; Embaie, Bethel Tesfai; Gavriliuc, Ioana Maria; Verhoeven, Bronte Manouk; Zhao, Ting; Li, Xiangyun; Jeffries, Nathan Elias; Pepich, Adena; Sarkar, Hirak; Olsen, Thale Kristin; Wickstrom, Malin; Stenman, Jakob; Reina-Bedoya, Oscar; Kharchenko, Peter V.; Saylor, Philip J.; Johnsen, John Inge; Sykes, David B.; Kogner, Per; Baryawno, Ninib

Single-cell analysis of immune and stroma cell remodeling in renal cell carcinoma primary tumors and bone metastatic lesions

CANCER RESEARCH

IF16.6

2023-04-04

PREAI

Mei, Shenglin; Alchahin, Adele M.; Tsea, Ioanna; Kfoury, Youmna; Taghreed, Taghreed; Sarkar, Hirak; Wu, Shulin; Subtelny, Alexander O.; Zhang, Yida; Salari, Keyan; Wu, Chin-Lee; Randolph, Mark A.; Scadden, David T.; Dahl, Douglas; Shin, John; Kharchenko, Peter; Saylor, Philip; Sykes, David; Baryawno, Ninib

Dissecting the immune suppressive human prostate tumor microenvironment via integrated single-cell and spatial transcriptomic analyses 通过整合的单细胞和空间转录组分析解剖免疫抑制性人类前列腺肿瘤微环境

NATURE COMMUNICATIONS

IF15.7

2023-02-07

OAAI

Hirz, Taghreed; Mei, Shenglin; Sarkar, Hirak; Kfoury, Youmna; Wu, Shulin; Verhoeven, Bronte M.; Subtelny, Alexander O.; Zlatev, Dimitar V.; Wszolek, Matthew W.; Salari, Keyan; Murray, Evan; Chen, Fei; Macosko, Evan Z.; Wu, Chin-Lee; Scadden, David T.; Dahl, Douglas M.; Baryawno, Ninib; Saylor, Philip J.; Kharchenko, Peter V.; Sykes, David B.

Haplotype-aware analysis of somatic copy number variations from single -cell transcriptomes 单细胞转录组体细胞拷贝数变异的单倍型感知分析

NATURE BIOTECHNOLOGY

IF41.7

2022-09-26

PREAI

Gao, Teng; Soldatov, Ruslan; Sarkar, Hirak; Kurkiewicz, Adam; Biederstedt, Evan; Loh, Po-Ru; Kharchenko, Peter, V

Alevin-fry unlocks rapid, accurate and memory-frugal quantification of single-cell RNA-seq data

NATURE METHODS

IF32.1

2022-03-11

OAAI

He, Dongze; Zakeri, Mohsen; Sarkar, Hirak; Soneson, Charlotte; Srivastava, Avi; Patro, Rob