Li, Daofeng; Liu, Shane; Assis, Pedro R.; Li, Mingjie; Dong, Shengcheng; Whaling, Ian; Jolanki, Otto; Kagda, Meenakshi; Zhang, Wenjin; Macias-Velasco, Juan F.; Liu, Tianjie; Cody, Sarah; Antonacci-Fulton, Lucinda; Huang, Yuanhao; Liu, Jie; Montgomery, Michael T.; Zeiberg, Daniel; Jain, Shantanu; Pejaver, Vikas; Bergquist, Timothy; Chen, Yile; Radivojac, Predrag; Gersbach, Charles A.; Sherpa, Rintsen N.; Castro, Christopher P.; Boyle, Alan P.; Starita, Lea M.; Fowler, Douglas M.; Ahituv, Nadav; Dey, Kushal K.; Majoros, William H.; Reddy, Timothy E.; Craven, Mark; Sinha, Riya; Sverchkov, Yuriy; Cai, Xiangmeng; Nzima, Mpathi Z.; Calderwood, Michael A.; Rozowsky, Joel; Gerstein, Mark; Ma, Jian; Yue, Feng; Cherry, J. Michael; Love, Michael, I; Engreitz, Jesse M.; Hitz, Benjamin C.; Wang, Ting

Tree-based differential testing using inferential uncertainty for RNA-seq

基于推断不确定性的树结构差异测试用于RNA-seq

GENOME RESEARCH

IF5.5

2025-10-010

Probabilistic classification of gene-by-treatment interactions on molecular count phenotypes

PLOS GENETICS

IF3.7

2025-04-010

OAAI

Extensive co-regulation of neighboring genes complicates the use of eQTLs in target gene prioritization

HUMAN GENETICS AND GENOMICS ADVANCES

IF3.6

2024-10-010

OAAI

Liver eQTL meta-analysis illuminates potential molecular mechanisms of cardiometabolic traits

肝脏eQTL荟萃分析阐明了心脏代谢性状的潜在分子机制

AMERICAN JOURNAL OF HUMAN GENETICS

IF8.1

2024-09-011

PRE

Genetics of cell-type-specific post-transcriptional gene regulation during human neurogenesis

AMERICAN JOURNAL OF HUMAN GENETICS

IF8.1

2024-09-010

OAAI

Cross-site reproducibility of human cortical organoids reveals consistent cell type composition and architecture

STEM CELL REPORTS

IF5.1

2024-09-011

OAAI

Assessing etiological heterogeneity for multinomial outcome with two-phase outcome-dependent sampling design

AMERICAN JOURNAL OF EPIDEMIOLOGY

IF4.8

2024-07-160

The tidyomics ecosystem: enhancing omic data analyses

NATURE METHODS

IF32.1

2024-06-142

PRE

Hutchison, William J.; Keyes, Timothy J.; Crowell, Helena L.; Serizay, Jacques; Soneson, Charlotte; Davis, Eric S.; Sato, Noriaki; Moses, Lambda; Tarlinton, Boyd; Nahid, Abdullah A.; Kosmac, Miha; Clayssen, Quentin; Yuan, Victor; Mu, Wancen; Park, Ji-Eun; Mamede, Izabela; Ryu, Min Hyung; Axisa, Pierre-Paul; Paiz, Paulina; Poon, Chi-Lam; Tang, Ming; Gottardo, Raphael; Morgan, Martin; Lee, Stuart; Lawrence, Michael; Hicks, Stephanie C.; Nolan, Garry P.; Davis, Kara L.; Papenfuss, Anthony T.; Love, Michael I.; Mangiola, Stefano

Genomic Characterization of the Carolina Breast Cancer Study

CANCER RESEARCH

IF16.6

2024-05-020

PRE

Joint genotypic and phenotypic outcome modeling improves base editing variant effect quantification

NATURE GENETICS

IF31.8

2024-04-242

PRE

Diffsig: Associating Risk Factors with Mutational Signatures

CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION