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Evolutionary history of transformation from chronic lymphocytic leukemia to Richter syndrome 慢性淋巴细胞白血病向Richter综合征转化的进化史 Parry, Erin M.; Leshchiner, Ignaty; Guieze, Romain; Johnson, Connor; Tausch, Eugen; Parikh, Sameer A.; Lemvigh, Camilla; Broseus, Julien; Hergalant, Sebastien; Messer, Conor; Utro, Filippo; Levovitz, Chaya; Rhrissorrakrai, Kahn; Li, Liang; Rosebrock, Daniel; Yin, Shanye; Deng, Stephanie; Slowik, Kara; Jacobs, Raquel; Huang, Teddy; Li, Shuqiang; Fell, Geoff; Redd, Robert; Lin, Ziao; Knisbacher, Binyamin A.; Livitz, Dimitri; Schneider, Christof; Ruthen, Neil; Elagina, Liudmila; Taylor-Weiner, Amaro; Persaud, Bria; Martinez, Aina; Fernandes, Stacey M.; Purroy, Noelia; Anandappa, Annabelle J.; Ma, Jialin; Hess, Julian; Rassenti, Laura Z.; Kipps, Thomas J.; Jain, Nitin; Wierda, William; Cymbalista, Florence; Feugier, Pierre; Kay, Neil E.; Livak, Kenneth J.; Danysh, Brian P.; Stewart, Chip; Neuberg, Donna; Davids, Matthew S.; Brown, Jennifer R.; Parida, Laxmi; Stilgenbauer, Stephan; Getz, Gad; Wu, Catherine J. J. 分享 收藏
Combined tumor and immune signals from genomes or transcriptomes predict outcomes of checkpoint inhibition in melanoma Freeman, Samuel S.; Sade-Feldman, Moshe; Kim, Jaegil; Stewart, Chip; Gonye, Anna L. K.; Ravi, Arvind; Arniella, Monica B.; Gushterova, Irena; LaSalle, Thomas J.; Blaum, Emily M.; Yizhak, Keren; Frederick, Dennie T.; Sharova, Tatyana; Leshchiner, Ignaty; Elagina, Liudmila; Spiro, Oliver G.; Livitz, Dimitri; Rosebrock, Daniel; Aguet, Francois; Carrot-Zhang, Jian; Ha, Gavin; Lin, Ziao; Chen, Jonathan H.; Barzily-Rokni, Michal; Hammond, Marc R.; von Eckstaedt, Hans C. Vitzthum; Blackmon, Shauna M.; Jiao, Yunxin J.; Gabriel, Stacey; Lawrence, Donald P.; Duncan, Lyn M.; Stemmer-Rachamimov, Anat O.; Wargo, Jennifer A.; Flaherty, Keith T.; Sullivan, Ryan J.; Boland, Genevieve M.; Meyerson, Matthew; Getz, Gad; Hacohen, Nir 分享 收藏
Longitudinal Single-Cell Dynamics of Chromatin Accessibility and Mitochondrial Mutations in Chronic Lymphocytic Leukemia Mirror Disease History Penter, Livius; Gohil, Satyen H.; Lareau, Caleb; Ludwig, Leif S.; Parry, Erin M.; Huang, Teddy; Li, Shuqiang; Zhang, Wandi; Livitz, Dimitri; Leshchiner, Ignaty; Parida, Laxmi; Getz, Gad; Rassenti, Laura Z.; Kipps, Thomas J.; Brown, Jennifer R.; Davids, Matthew S.; Neuberg, Donna S.; Livak, Kenneth J.; Sankaran, Vijay G.; Wu, Catherine J. 分享 收藏
Molecular features of exceptional response to neoadjuvant anti-androgen therapy in high-risk localized prostate cancer Tewari, Alok K.; Cheung, Alexander T. M.; Crowdis, Jett; Conway, Jake R.; Camp, Sabrina Y.; Wankowicz, Stephanie A.; Livitz, Dimitri G.; Park, Jihye; Lis, Rosina T.; Bosma-Moody, Alice; He, Meng Xiao; AlDubayan, Saud H.; Zhang, Zhenwei; McKay, Rana R.; Leshchiner, Ignaty; Brown, Myles; Balk, Steven P.; Getz, Gad; Taplin, Mary-Ellen; Van Allen, Eliezer M. 分享 收藏
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Framework for quality assessment of whole genome cancer sequences Whalley, Justin P.; Buchhalter, Ivo; Rheinbay, Esther; Raine, Keiran M.; Stobbe, Miranda D.; Kleinheinz, Kortine; Werner, Johannes; Beltran, Sergi; Gut, Marta; Huebschmann, Daniel; Hutter, Barbara; Livitz, Dimitri; Perry, Marc D.; Rosenberg, Mara; Saksena, Gordon; Trotta, Jean-Remi; Eils, Roland; Gerhard, Daniela S.; Campbell, Peter J.; Schlesner, Matthias; Gut, Ivo G. 分享 收藏
Combined signals from tumor and immune cells predict outcomes of checkpoint inhibition in melanoma Freeman, Samuel S.; Sade-Feldman, Moshe; Kim, Jaegil; Stewart, Chip; Ravi, Arvind; Arniella, Monica; Yizhak, Keren; Leshchiner, Ignaty; Elagina, Liudmila; Spiro, Oliver; Livitz, Dimitri; Rosebrock, Daniel; Aguet, Francois; Carrot-Zhang, Jian; Gonye, Anna; Ha, Gavin; Lin, Ziao; Chen, Jonathan H.; Frederick, Dennie T.; Barzily-Rokni, Michal; Hammond, Marc R.; Vitzthum, Hans; Blackmon, Shauna M.; Jiao, Yunxin J.; Lawrence, Donald P.; Duncan, Lyn M.; Stemmer-Rachamimov, Anat; Wargo, Jennifer A.; Flaherty, Keith T.; Boland, Genevieve M.; Sullivan, Ryan J.; Meyerson, Matthew; Getz, Gad; Hacohen, Nir 分享 收藏
Butler enables rapid cloud-based analysis of thousands of human genomes (vol 79, pg 134, 2019) Yakneen, Sergei; Waszak, Sebastian M.; Gertz, Michael; Korbel, Jan O.; Aminou, Brice; Bartolome, Javier; Boroevich, Keith A.; Boyce, Rich; Brooks, Angela N.; Buchanan, Alex; Buchhalter, Ivo; Butler, Adam P.; Byrne, Niall J.; Cafferkey, Andy; Campbell, Peter J.; Chen, Zhaohong; Cho, Sunghoon; Choi, Wan; Clapham, Peter; Davis-Dusenbery, Brandi N.; De La Vega, Francisco M.; Demeulemeester, Jonas; Dow, Michelle T.; Dursi, Lewis Jonathan; Eils, Juergen; Eils, Roland; Ellrott, Kyle; Farcas, Claudiu; Favero, Francesco; Fayzullaev, Nodirjon; Ferretti, Vincent; Flicek, Paul; Fonseca, Nuno A.; Gelpi, Josep Ll.; Getz, Gad; Gibson, Bob; Grossman, Robert L.; Harismendy, Olivier; Heath, Allison P.; Heinold, Michael C.; Hess, Julian M.; Hofmann, Oliver; Hong, Jongwhi H.; Hudson, Thomas J.; Hutter, Barbara; Hutter, Carolyn M.; Hubschmann, Daniel; Imoto, Seiya; Ivkovic, Sinisa; Jeon, Seung-Hyup; Jiao, Wei; Jung, Jongsun; Kabbe, Rolf; Kahles, Andre; Kerssemakers, Jules N. A.; Kim, Hyung-Lae; Kim, Hyunghwan; Kim, Jihoon; Kim, Youngwook; Kleinheinz, Kortine; Koscher, Michael; Koures, Antonios; Kovacevic, Milena; Lawerenz, Chris; Leshchiner, Ignaty; Liu, Jia; Livitz, Dimitri; Mihaiescu, George L.; Mijalkovic, Sanja; Lazic, Ana Mijalkovic; Miyano, Satoru; Miyoshi, Naoki; Nahal-Bose, Hardeep K.; Nakagawa, Hidewaki; Nastic, Mia; Newhouse, Steven J.; Nicholson, Jonathan; O'Connor, Brian D.; Ocana, David; Ohi, Kazuhiro; Ohno-Machado, Lucila; Omberg, Larsson; Ouellette, B. F. Francis; Paramasivam, Nagarajan; Perry, Marc D.; Pihl, Todd D.; Prinz, Manuel; Puiggros, Montserrat; Radovic, Petar; Raine, Keiran M.; Rheinbay, Esther; Rosenberg, Mara; Royo, Romina; Ratsch, Gunnar; Saksena, Gordon; Schlesner, Matthias; Shorser, Solomon I.; Short, Charles; Sofia, Heidi J.; Spring, Jonathan; Stein, Lincoln D.; Struck, Adam J.; Tiao, Grace; Tijanic, Nebojsa; Torrents, David; Van Loo, Peter; Vazquez, Miguel; Vicente, David; Wala, Jeremiah A.; Wang, Zhining; Waszak, Sebastian M.; Weischenfeldt, Joachim; Werner, Johannes; Williams, Ashley; Woo, Youngchoon; Wright, Adam J.; Xiang, Qian; Yang, Liming; Yuen, Denis; Yung, Christina K.; Zhang, Junjun; Korbel, Jan O. 分享 收藏
Butler enables rapid cloud-based analysis of thousands of human genomes Butler能够对成千上万的人类基因组进行基于云的快速分析 Yakneen, Sergei; Waszak, Sebastian M.; Gertz, Michael; Korbel, Jan O.; Aminou, Brice; Bartolome, Javier; Boroevich, Keith A.; Boyce, Rich; Brooks, Angela N.; Buchanan, Alex; Buchhalter, Ivo; Butler, Adam P.; Byrne, Niall J.; Cafferkey, Andy; Campbell, Peter J.; Chen, Zhaohong; Cho, Sunghoon; Choi, Wan; Clapham, Peter; Davis-Dusenbery, Brandi N.; De La Vega, Francisco M.; Demeulemeester, Jonas; Dow, Michelle T.; Dursi, Lewis Jonathan; Eils, Juergen; Eils, Roland; Ellrott, Kyle; Farcas, Claudiu; Favero, Francesco; Fayzullaev, Nodirjon; Ferretti, Vincent; Flicek, Paul; Fonseca, Nuno A.; Gelpi, Josep Ll; Getz, Gad; Gibson, Bob; Grossman, Robert L.; Harismendy, Olivier; Heath, Allison P.; Heinold, Michael C.; Hess, Julian M.; Hofmann, Oliver; Hong, Jongwhi H.; Hudson, Thomas J.; Hutter, Barbara; Hutter, Carolyn M.; Huebschmann, Daniel; Imoto, Seiya; Ivkovic, Sinisa; Jeon, Seung-Hyup; Jiao, Wei; Jung, Jongsun; Kabbe, Rolf; Kahles, Andre; Kerssemakers, Jules N. A.; Kim, Hyung-Lae; Kim, Hyunghwan; Kim, Jihoon; Kim, Youngwook; Kleinheinz, Kortine; Koscher, Michael; Koures, Antonios; Kovacevic, Milena; Lawerenz, Chris; Leshchiner, Ignaty; Liu, Jia; Livitz, Dimitri; Mihaiescu, George L.; Mijalkovic, Sanja; Lazic, Ana Mijalkovic; Miyano, Satoru; Miyoshi, Naoki; Nahal-Bose, Hardeep K.; Nakagawa, Hidewaki; Nastic, Mia; Newhouse, Steven J.; Nicholson, Jonathan; O'Connor, Brian D.; Ocana, David; Ohi, Kazuhiro; Ohno-Machado, Lucila; Omberg, Larsson; Ouellette, B. F. Francis; Paramasivam, Nagarajan; Perry, Marc D.; Pihl, Todd D.; Prinz, Manuel; Puiggros, Montserrat; Radovic, Petar; Raine, Keiran M.; Rheinbay, Esther; Rosenberg, Mara; Royo, Romina; Raetsch, Gunnar; Saksena, Gordon; Schlesner, Matthias; Shorser, Solomon, I; Short, Charles; Sofia, Heidi J.; Spring, Jonathan; Stein, Lincoln D.; Struck, Adam J.; Tiao, Grace; Tijanic, Nebojsa; Torrents, David; Van Loo, Peter; Vazquez, Miguel; Vicente, David; Wala, Jeremiah A.; Wang, Zhining; Weischenfeldt, Joachim; Werner, Johannes; Williams, Ashley; Woo, Youngchoon; Wright, Adam J.; Xiang, Qian; Yang, Liming; Yuen, Denis; Yung, Christina K.; Zhang, Junjun 分享 收藏
Liquid versus tissue biopsy for detecting acquired resistance and tumor heterogeneity in gastrointestinal cancers (vol 25, pg 1415, 2019) 液体与组织活检用于检测胃肠癌的获得性耐药性和肿瘤异质性 (第25卷，1415页，2019) Parikh, Aparna R.; Leshchiner, Ignaty; Elagina, Liudmila; Goyal, Lipika; Levovitz, Chaya; Siravegna, Giulia; Livitz, Dimitri; Rhrissorrakrai, Kahn; Martin, Elizabeth E.; Van Seventer, Emily E.; Hanna, Megan; Slowik, Kara; Utro, Filippo; Pinto, Christopher J.; Wong, Alicia; Danysh, Brian P.; de la Cruz, Ferran Fece; Fetter, Isobel J.; Nadres, Brandon; Shahzade, Heather A.; Allen, Jill N.; Blaszkowsky, Lawrence S.; Clark, Jeffrey W.; Giantonio, Bruce; Murphy, Janet E.; Nipp, Ryan D.; Roeland, Eric; Ryan, David P.; Weekes, Colin D.; Kwak, Eunice L.; Faris, Jason E.; Wo, Jennifer Y.; Aguet, Francois; Dey-Guha, Ipsita; Hazar-Rethinam, Mehlika; Dias-Santagata, Dora; Ting, David T.; Zhu, Andrew X.; Hong, Theodore S.; Golub, Todd R.; Iafrate, A. John; Adalsteinsson, Viktor A.; Bardelli, Alberto; Parida, Laxmi; Juric, Dejan; Getz, Gad; Corcoran, Ryan B. 分享 收藏
Liquid versus tissue biopsy for detecting acquired resistance and tumor heterogeneity in gastrointestinal cancers 液体与组织活检用于检测胃肠道癌症的获得性耐药性和肿瘤异质性 Parikh, Aparna R.; Leshchiner, Ignaty; Elagina, Liudmila; Goyal, Lipika; Levovitz, Chaya; Siravegna, Giulia; Livitz, Dimitri; Rhrissorrakrai, Kahn; Martin, Elizabeth E.; Van Seventer, Emily E.; Hanna, Megan; Slowik, Kara; Utro, Filippo; Pinto, Christopher J.; Wong, Alicia; Danysh, Brian P.; de la Cruz, Ferran Fece; Fetter, Isobel J.; Nadres, Brandon; Shahzade, Heather A.; Allen, Jill N.; Blaszkowsky, Lawrence S.; Clark, Jeffrey W.; Giantonio, Bruce; Murphy, Janet E.; Nipp, Ryan D.; Roeland, Eric; Ryan, David P.; Weekes, Colin D.; Kwak, Eunice L.; Faris, Jason E.; Wo, Jennifer Y.; Aguet, Francois; Dey-Guha, Ipsita; Hazar-Rethinam, Mehlika; Dias-Santagata, Dora; Ting, David T.; Zhu, Andrew X.; Hong, Theodore S.; Golub, Todd R.; Iafrate, A. John; Adalsteinsson, Viktor A.; Bardelli, Alberto; Parida, Laxmi; Juric, Dejan; Getz, Gad; Corcoran, Ryan B. 分享 收藏
Liquid biopsy versus tissue biopsy to assess acquired resistance and tumor heterogeneity in gastrointestinal cancers Parikh, Aparna R.; Leshchiner, Ignaty; Elagina, Liudmila; Goyal, Lipika; Levovitz, Chaya; Siravegna, Giulia; Livitz, Dimitri; Rhrissorrakrai, Kahn; Martin, Liz; Van Seventer, Emily E.; Hanna, Megan; Slowik, Kara; Utro, Filippo; Pinto, Christopher J.; Wong, Alicia; Danysh, Brian P.; de la Cruz, Ferran Fece; Fetter, Isobel J.; Nadres, Brandon; Shahzade, Heather A.; Allen, Jill N.; Blaszkowsky, Lawrence S.; Clark, Jeffrey W.; Giantonio, Bruce; Murphy, Janet E.; Nipp, Ryan D.; Roeland, Eric; Ryan, David P.; Weekes, Colin D.; Kwak, Eunice L.; Faris, Jason E.; Aguet, Francois; Guha, Ipsita; Hazar-Rethinam, Mehlika; Dias-Santagata, Dora; Ting, David T.; Zhu, Andrew X.; Hong, Theodore S.; Golub, Todd R.; Lafrate, A. J.; Adalsteinsson, Viktor; Bardelli, Alberto; Parida, Laxmi; Juric, Dejan; Getz, Gad; Corcoran, Ryan B. 分享 收藏
Evolutionary analysis of 462 serial metastatic biopsies from 208 patients with estrogen receptor-positive (ER plus ) metastatic breast cancer (MBC) using whole exome sequencing (WES) Cohen, O.; Buendia-Buendia, J.; Wander, S.; Nayar, U.; Mao, P.; Waks, A.; Kim, D.; Freeman, S.; Adalsteinsson, V.; Helvie, K.; Livitz, D.; Rosebrock, D.; Leshchiner, I.; Dellostritto, L.; Garrido-Castro, A.; Jain, E.; Periyasamy, S.; Mackichan, C.; Lloyd, M.; Marini, L.; Krop, I.; Garraway, L.; Getz, G.; Winer, E.; Lin, N.; Wagle, N. 分享 收藏
Mechanisms of acquired resistance to rapalogs in metastatic renal cell carcinoma Hamieh, Lana; Choueiri, Toni K.; Ogorek, Barbara; Khabibullin, Damir; Rosebrock, Daniel; Livitz, Dimitri; Fay, Andre; Pignon, Jean-Christophe; McDermott, David F.; Agarwal, Neeraj; Gao, Wenhua; Signoretti, Sabina; Kwiatkowski, David J. 分享 收藏
Liquid biopsies identify trunk mutations and reflect multiple tumors in a patient Freeman, Samuel S.; Lin, Ziao; Ha, Gavin; Leshchiner, Ignaty; Rhoades, Justin; Livitz, Dimitri; Rosebrock, Daniel; Reed, Sarah C.; Gydush, Gregory; Lo, Christopher; Rotem, Denisse; Choudhury, Atish D.; Stover, Daniel G.; Parsons, Heather A.; Boehm, Jesse S.; Love, J. Christopher; Meyerson, Matthew; Grandgenett, Paul; Hollingsworth, Michael A.; Adalsteinsson, Viktor A.; Getz, Gad 分享 收藏
Integrative and multiregional molecular analysis of localized, high grade prostate cancer treated with neoadjuvant androgen deprivation treatment Wankowicz, Stephanie A.; Bowden, Michaela; Lis, Rosina; Margolis, Claire; Livitz, Dimitri; Leshchiner, Ignaty; Liu, David; He, Meng Xiao; Zhang, Zhenwei; Getz, Gad; Taplin, Mary-Ellen; Van Allen, Eliezer 分享 收藏
Pervasive intra-tumour heterogeneity and subclonal selection across cancer types Dentro, Stefan; Leshchiner, Ignaty; Haase, Kerstin; Wintersinger, Jeff; Deshwar, Amit; Tarabichi, Maxime; Rubanova, Yulia; Yu, Kaixian; Garcia, Ignacio Vazquez; Macintyre, Geoff; Kleinheinz, Kortine; Livitz, Dimitri; Malikic, Salem; Donmez, Nilgun; Sengupta, Subhajit; Ji, Yuan; Demeulemeester, Jonas; Anur, Pavana; Jolly, Clemency; Cmero, Marek; Rosebrock, Daniel; Schumacher, Steve; Fan, Yu; Fittall, Matthew; Yao, Xiaotong; Lee, Juhee; Schlesner, Matthias; Zhu, Hongtu; Adams, David; Getz, Gad; Boutros, Paul; Imielinski, Marcin; Beroukhim, Rameen; Sahinalp, Cenk; Peifer, Martin; Martincorena, Inigo; Markowetz, Florian; Mustonen, Ville; Yuan, Ke; Gerstung, Moritz; Wang, Wenyi; Spellman, Paul; Morris, Quaid; Wedge, David; Van Loo, Peter 分享 收藏
The evolutionary history of 2,658 cancers Jolly, Clemency; Gerstung, Moritz; Leshchiner, Ignaty; Dentro, Stefan C.; Gonzalez, Santiago; Mitchell, Thomas J.; Rubanova, Yulia; Anur, Pavana; Rosebrock, Daniel; Yu, Kaixian; Tarabichi, Maxime; Deshwar, Amit; Wintersinger, Jeff; Kleinheinz, Kortine; Vasquez-Garcia, Ignacio; Haase, Kerstin; Sengupta, Subhajit; Macintyre, Geoff; Malikic, Salem; Donmez, Nilgun; Livitz, Dimitri G.; Cmero, Mark; Demeulemeester, Jonas; Schumacher, Steve; Fan, Yu; Yao, Xiaotong; Lee, Juhee; Schlesner, Matthias; Boutros, Paul C.; Bowtell, David D.; Zhu, Hongtu; Getz, Gad; Imielinski, Marcin; Beroukhim, Rameen; Sahinalp, S. Cenk; Ji, Yuan; Peifer, Martin; Markowetz, Florian; Mustonen, Ville; Juan, Ke; Wang, Wenyi; Morris, Quaid D.; Spellman, Paul T.; Wedge, David C.; Van Loo, Peter 分享 收藏
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