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Roadmap on deep learning for microscopy

delete2026-01-29
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OA
AI
G
Giovanni Volpe *
C
Carolina Wählby *
田磊 cover
田磊 (Lei Tian) *
M
Michael Hecht
A
Artur Yakimovich
K
Kristina Monakhova
L
Laura Waller
I
Ivo F. Sbalzarini
C
Christopher A. Metzler
M
Mingyang Xie
K
Kevin Zhang
I
Isaac C. D. Lenton
H
Halina Rubinsztein‐Dunlop
D
Daniel Brunner
B
Bijie Bai
A
Aydogan Özcan
D
Daniel Midtvedt
H
Hao Wang
T
Tongyu Li
N
Nataša Sladoje
J
Joakim Lindblad
J
Jason T. Smith
M
Marien Ochoa
M
Margarida Barroso
X
Xavier Intes
T
T. Qiu
L
Li-Yu Yu
S
Sixian You
Y
Yongtao Liu
M
Maxim Ziatdinov
S
Sergei V. Kalinin
A
Arlo Sheridan
U
Uri Manor
E
Elias Nehme
O
Ofri Goldenberg
Y
Yoav Shechtman
H
Henrik Klein Moberg
C
Christoph Langhammer
B
Barbora Špačková
S
Saga Helgadóttir
B
Benjamin Midtvedt
A
Aykut Argun
T
Tobias Thalheim
F
Frank Cichos
S
Stefano Bo
L
Lars Hubatsch
J
Jesús Pineda
C
Carlo Manzo
H
Harshith Bachimanchi
E
Erik Selander
A
A. Homs-Corbera
M
Martin Fränzl
K
Kevin de Haan
Y
Yair Rivenson
Z
Zofia Korczak
C
Caroline B. Adiels
M
Mite Mijalkov
D
Dániel Veréb
Y
Yu-Wei Chang
J
Joana B. Pereira
D
Damian J. Matuszewski
G
Gustaf Kylberg
I
Ida‐Maria Sintorn
J
Juan Carlos Caicedo
B
Beth A. Cimini
M
Muyinatu A. Lediju Bell
B
Bruno M. Saraiva
G
Guillaume Jacquemet
R
Ricardo Henriques
W
Wei Ouyang
T
Trang T. Le
E
Estibaliz Gómez‐de‐Mariscal
D
Daniel Sage
A
Arrate Muñoz‐Barrutia
E
Ebba Josefson Lindqvist
J
Johanna Bergman
DOI:10.1088/2515-7647/ae0fd1delete
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Abstract

Abstract

En 中文
Through digital imaging, microscopy has evolved from primarily being a means for visual observation of life at the micro- and nano-scale, to a quantitative tool with ever-increasing resolution and throughput. Artificial intelligence, deep neural networks, and machine learning (ML) are all niche terms describing computational methods that have gained a pivotal role in microscopy-based research over the past decade. This Roadmap encompasses key aspects of how ML is applied to microscopy image data, with the aim of gaining scientific knowledge by improved image quality, automated detection, segmentation, classification and tracking of objects, and efficient merging of information from multiple imaging modalities. We aim to give the reader an overview of the key developments and an understanding of possibilities and limitations of ML for microscopy. It will be of interest to a wide cross-disciplinary audience in the physical sciences and life sciences.
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journal of physics: photonics
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66
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