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Novel computational method for predicting polytherapy switching strategies to overcome tumor heterogeneity and evolution

delete2017-03-13
delete27
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OA
AI
V
Vanessa D. Jönsson
C
Collin M. Blakely
L
Luping Lin
S
Saurabh Asthana
N
Nikolai Matni
V
Victor Olivas
E
Evangelos Pazarentzos
M
Matthew A. Gubens
B
Boris C. Bastian
B
Barry S. Taylor
J
John C. Doyle
T
Trever G. Bivona *
DOI:10.1038/srep44206delete
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Abstract

Abstract

En 中文
The success of targeted cancer therapy is limited by drug resistance that can result from tumor genetic heterogeneity. The current approach to address resistance typically involves initiating a new treatment after clinical/radiographic disease progression, ultimately resulting in futility in most patients. Towards a potential alternative solution, we developed a novel computational framework that uses human cancer profiling data to systematically identify dynamic, pre-emptive, and sometimes non-intuitive treatment strategies that can better control tumors in real-time. By studying lung adenocarcinoma clinical specimens and preclinical models, our computational analyses revealed that the best anti-cancer strategies addressed existing resistant subpopulations as they emerged dynamically during treatment. In some cases, the best computed treatment strategy used unconventional therapy switching while the bulk tumor was responding, a prediction we confirmed in vitro. The new framework presented here could guide the principled implementation of dynamic molecular monitoring and treatment strategies to improve cancer control.
Keywords:
INTRATUMOR HETEROGENEITY
LUNG ADENOCARCINOMAS
MIXED IMMUNOTHERAPY
ACQUIRED-RESISTANCE
MUTATIONS
CHEMOTHERAPY
DRIVEN
DNA
ACTIVATION
FRAMEWORK
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Scientific Reports cover
Scientific Reports
IF:
3.9
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27.1W
Citations:
83.5W

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C
California Institute of Technology
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Papers: 2.5W
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U
university of california san francisco
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University of California System
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