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刘琦 cover

刘琦 (Qi Liu)

tongji university

41H-index
257Paper Count
6.6KCitation Count
Published Papers 87
Publication Date
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L-arginine alleviates polycystic ovary syndrome restore ovulation and androgen levels by regulating gut microbiota
errnpj Biofilms and Microbiomes
IF9.2
err2026-08-24
err0
errOAAI
errDiliqingna Dilimulati; Meili Cai; Yicheng Gao; Yuqin Zhang; Xuyang Jia; Xiaowen Shao; Lie Du; Jiangfan Zhu; Xiaojing Lin; Haibing Chen; Qi Liu; Manna Zhang; Shen Qu
errShare
errSave
Mechanisms of Hematopoietic Stem Cell Aging and Emerging Rejuvenation Strategies
errStem Cell Reviews and Reports
IF4.2
err2026-08-10
err0
PREAI
errQi Liu; Lijun Zhao; Chengying Li
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errSave
Telomere-to-Telomere Gap-Free Genome Assembly and Comparative Analysis of the Opsariichthys bidens (Cypriniformes: Xenocyprididae)
errBiology
IF3.5
err2026-03-03
err0
errOAAI
errXinyue Wang; Qi Liu; Denghua Yin; Pan Wang; Min Jiang; Jie Liu; Ning Sun; Yunzhi Yan; Kai Liu
errShare
errSave
ProTCR: a protein language model-driven framework for decoding TCR-antigen recognition toward precision immunotherapies
errBriefings in Bioinformatics
IF7.7
err2026-01-01
err0
PREAI
errXu, Minrui; Lu, Manman; Liu, Peng; Zhang, Siwen; Chen, Lanming; Liu, Qi; Lin, Yong; Xie, Lu
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errSave
Benchmarking algorithms for generalizable single-cell perturbation response prediction
errNature Methods
IF32.1
err2025-12-11
err0
PREAI
errZhiting Wei; Yiheng Wang; Yicheng Gao; Shuguang Wang; Ping Li; Duanmiao Si; Yuli Gao; Siqi Wu; Danlu Li; Kejing Dong; Xingbo Yang; Chen Tang; Shaliu Fu; Xiaohan Chen; Wannian Li; Yuzhou You; Chen Zhang; Aibin Liang; Guohui Chuai; Qi Liu
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errSave
Lactoferrin-driven delivery of Kaixinsan nanomedicine for Alzheimer's disease neuroprotection: Mechanistic insights from bioinformatics and multi-target validation
errInternational Journal of Biological Macromolecules
IF8.5
err2025-11-03
err0
PREAI
errJiapu Wang; Zhi Du; Wenjuan Wang; Ziwei Liang; Yunhan Hou; Qi Liu; Jie Wang; Shaojie Wang; Mike He; Zongyi Li; Ruofeng Yang; Kaiqun Wang; Liqin Zhao; Yan Wei; Di Huang
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errSave
Genome survey and evolutionary analysis of 8 Lamprotula species: SSR profiling, mitochondrial characterization, and population dynamics inference
errDNA RESEARCH
IF2.9
err2025-10-01
err0
PREAI
errJiang, Min; Liu, Qi; Jiang, Chao; Zhan, Mingfei; Wen, Haibo; Shu, Fengyue; Xie, Lingli; Liu, Tengteng; Ren, Chenliang; Tang, Wenqiao; Liu, Kai
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errSave
Discovery of Lenacapavir: First-in-Class Twice-Yearly Capsid Inhibitor for HIV-1 Treatment and Pre-exposure Prophylaxis
errJournal of Medicinal Chemistry
IF6.8
err2025-10-01
err0
errOAAI
errEda Canales; Winston Tse; Scott D. Schroeder; Chien-Hung Chou; Qi Liu; Jennifer Zhang; Scott E. Lazerwith; Philip Morganelli; Roland D. Saito; Gediminas Brizgys; Jiayao Li; Qiaoyin Wu; Michael Graupe; Randall L. Halcomb; Manoj Desai; Carina Cannizzaro; Eric Hu; Jason K. Perry; Armando G. Villaseñor; John R. Somoza; Ryan D. Ferrao; S. Swaminathan; Jim Zheng; Bing Lu; Judy Mwangi; Kelly Wang; Raju Subramanian; Bill J. Smith; Gerry Rhodes; William Rowe; Dorothea Sauer; Latesh Lad; Giuseppe A. Papalia; Sheila Clancy; George J. Stepan; Helen Yu; Roman Sakowicz; Bing Shi; Gavin Carr; Rujuta A. Bam; Luong K. Tsai; Eric Singer; Derek Hansen; Andrew Mulato; Stephen R. Yant; Tomas Cihlar; John O. Link
errShare
errSave
Weakly supervised peptide-TCR binding prediction facilitates neoantigen identification
errCell Systems
IF7.7
err2025-09-22
err0
PREAI
errYuli Gao; Yicheng Gao; Siqi Wu; Danlu Li; Chi Zhou; Fangliangzi Meng; Kejing Dong; Xueying Zhao; Ping Li; Aibin Liang; Qi Liu
errShare
errSave
Discovery of CRISPR-Cas12a clades using a large language model
errNature Communications
IF15.7
err2025-08-23
err0
errOAAI
errYuanyuan Feng; Junchao Shi; Zhanwei Li; Yongqian Li; Jiaxi Yang; Shisheng Huang; Jinfang Zheng; Wei Han; Yunbo Qiao; Jun Zhang; Qi Liu; Yao Yang; Chunyi Hu; Lina Wu; Xiaokang Zhang; Jin Tang; Xingxu Huang; Peixiang Ma
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errSave
The pronounced cytotoxic effects of chimeric antigen receptor T cells targeting B7-H3 in organoids and liver xenografts derived from colorectal cancer patients
errBritish Journal of Cancer
IF6.8
err2025-07-28
err0
errOAAI
errYuling Sheng; Li Yan; Qi Liu; Yifan Peng; Jingyun Tan; Wenhua Li; Wei Mao; Wenqing Wei; Yanyun Chang; Linlin Cao; Yi Tan; Yanlin Xiao; Wenyong Zhang; Jing Gao; Yang Xu; Changzheng Du
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errSave
Causal disentanglement for single-cell representations and controllable counterfactual generation
errNature Communications
IF15.7
err2025-07-23
err0
errOAAI
errYicheng Gao; Kejing Dong; Caihua Shan; Dongsheng Li; Qi Liu
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errSave
Benchmarking single-cell multi-modal data integrations
errNature Methods
IF32.1
err2025-07-10
err0
PREAI
errShaliu Fu; Shuguang Wang; Duanmiao Si; Gaoyang Li; Yawei Gao; Qi Liu
errShare
errSave
SpaLinker identifies phenotype-associated spatial tumor microenvironment features by integrating bulk and spatial sequencing data
errCell Genomics
IF9
err2025-06-05
err0
errOAAI
errXiaojie Cheng; Chen Tang; Kejing Dong; Yuzhou You; Xueying Zhao; Bin Duan; Shaoqi Chen; Guohui Chuai; Zhenbo Zhang; Qi Liu
errShare
errSave
Pseudo-Contrast-enhanced US via Enhanced Generative Adversarial Networks for Evaluating Tumor Ablation Efficacy
errRADIOLOGY-ARTIFICIAL INTELLIGENCE
IF13.2
err2025-05-01
err0
PREAI
errChen, Chen; Yu, Jiabin; Xu, Zhikang; Xu, Changsong; Zhou, Zubang; Hao, Jindong; Wang, Vicky Yang; Yao, Jincao; Zhou, Lingyan; Xu, Chenke; Song, Mei; Zhang, Qi; Liu, Xiaofang; Sui, Lin; Yan, Yuqi; Jiang, Tian; Zhou, Yahan; Wu, Yingtianqi; Xiao, Binggang; Xu, Chenjie; Mi, Hongmei; Yang, Li; Wu, Zhiwei; He, Qingquan; Chen, Jian; Liu, Qi
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errSave
The expression of PRMT5 is associated with postoperative chemotherapeutic outcome in colon cancer
errBMC CANCER
IF3.4
err2025-04-23
err0
errOAAI
errLu, Lu; Li, Huan; Yin, Hongfang; Wang, Feng; Sun, Xiaowen; Chang, Yanyun; Sheng, Yuling; Liu, Qi; Peng, Yifan; Du, Changzheng
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errSave
Panzerina lanata accelerates methicillin-resistant Staphylococcus aureus eradication by promoting migration and activation of neutrophils
errFRONTIERS IN PHARMACOLOGY
IF4.8
err2025-01-14
err0
errOAAI
errDong, Shuai; Bai, Xingyuan; Chen, Bin; Fan, Minzhe; Liu, Qi; Zhao, Yubo; Li, Linsen; Zhu, Dan
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errSave
PerturBase: a comprehensive database for single-cell perturbation data analysis and visualization
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-10-08
err0
errOAAI
errWei, Zhiting; Si, Duanmiao; Duan, Bin; Gao, Yicheng; Yu, Qian; Zhang, Zhenbo; Guo, Ling; Liu, Qi
errShare
errSave
Toward subtask-decomposition-based learning and benchmarking for predicting genetic perturbation outcomes and beyond
errNATURE COMPUTATIONAL SCIENCE
IF18.3
err2024-09-27
err1
PREAI
errGao, Yicheng; Wei, Zhiting; Dong, Kejing; Chen, Ke; Yang, Jingya; Chuai, Guohui; Liu, Qi
errShare
errSave
Delineating cell types with transcriptional kinetics
errNATURE COMPUTATIONAL SCIENCE
IF18.3
err2024-09-20
err0
PREAI
errGao, Yicheng; Liu, Qi
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errSave

Research Directions

实验室主页：中文：英文：
Co-authors
Cooperation Journals
刘
刘劼 (Jie Liu)
H-index: 150 · Papers: 2.3K
李金 cover
李金 (Jin Li)
H-index: 149 · Papers: 4.5K
樊
樊嘉 (Jia Fan)
H-index: 126 · Papers: 1.5K
I
Ian T. Paulsen
H-index: 125 · Papers: 514
Z
Zhiping Weng
H-index: 119 · Papers: 537
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