Evan Floden - Publications, H-index & Citations

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Evan Floden

Pompeu Fabra University

12H-index

37Paper Count

5.6KCitation Count

Published Papers 10

Publication Date

An nf-core framework for the systematic comparison of alternative modeling tools: the multiple sequence alignment case study

NAR GENOMICS AND BIOINFORMATICS

IF2.8

2025-09-01

OAAI

Santus, Luisa; Espinosa-Carrasco, Jose; Rauschning, Leon; Mir-Pedrol, Julia; Trujnara, Igor; Vignoli, Alessio; Mansouri, Leila; Baltzis, Athanasios; Floden, Evan W.; Di Tommaso, Paolo; Garriga, Edgar; Gudys, Adam; Deorowicz, Sebastian; Gilchrist, Cameron; Steinegger, Martin; Notredame, Cedric

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Large multiple sequence alignments with a root-to-leaf regressive method

NATURE BIOTECHNOLOGY

IF41.7

2019-12-02

OAAI

Garriga, Edgar; Di Tommaso, Paolo; Magis, Cedrik; Erb, Ionas; Mansouri, Leila; Baltzis, Athanasios; Laayouni, Hafid; Kondrashov, Fyodor; Floden, Evan; Notredame, Cedric

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Generalized Bootstrap Supports for Phylogenetic Analyses of Protein Sequences Incorporating Alignment Uncertainty

SYSTEMATIC BIOLOGY

IF5.7

2018-03-29

OAAI

Chatzou, Maria; Floden, Evan W.; Di Tommaso, Paolo; Gascuel, Olivier; Notredame, Cedric

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Nextflow enables reproducible computational workflows

NATURE BIOTECHNOLOGY

IF41.7

2017-04-11

1.2K

PREAI

Di Tommaso, Paolo; Chatzou, Maria; Floden, Evan W.; Prieto Barja, Pablo; Palumbo, Emilio; Notredame, Cedric

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HCVIVdb: The hepatitis-C IRES variation database

BMC MICROBIOLOGY

IF4.2

2016-08-15

OAAI

Floden, Evan W.; Khawaja, Anas; Vopalensky, Vaclav; Pospisek, Martin

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PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases

NUCLEIC ACIDS RESEARCH

IF13.1

2016-04-22

OAAI

Floden, Evan W.; Tommaso, Paolo D.; Chatzou, Maria; Magis, Cedrik; Notredame, Cedric; Chang, Jia-Ming

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Rfam 12.0: updates to the RNA families database

NUCLEIC ACIDS RESEARCH

IF13.1

2014-11-11

890

OAAI

Nawrocki, Eric P.; Burge, Sarah W.; Bateman, Alex; Daub, Jennifer; Eberhardt, Ruth Y.; Eddy, Sean R.; Floden, Evan W.; Gardner, Paul P.; Jones, Thomas A.; Tate, John; Finn, Robert D.

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Quantification of in vitro and in vivo angiogenesis stimulated by ovine forestomach matrix biomaterial

BIOMATERIALS

IF12.9

2011-09-01

PREAI

Irvine, Sharleen M.; Cayzer, Juliet; Todd, Elise M.; Lun, Stan; Floden, Evan W.; Negron, Leonardo; Fisher, James N.; Dempsey, Sandi G.; Alexander, Alan; Hill, Michael C.; O'Rouke, Annalee; Gunningham, Sarah P.; Knight, Cameron; Davis, Paul F.; Ward, Brian R.; May, Barnaby C. H.

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Biophysical characterization of ovine forestomach extracellular matrix biomaterials

JOURNAL OF BIOMEDICAL MATERIALS RESEARCH PART B-APPLIED BIOMATERIALS

IF3.4

2010-11-04

PREAI

Floden, Evan W.; Malak, Sharif F. F.; Basil-Jones, Melissa M.; Negron, Leonardo; Fisher, James N.; Lun, Stan; Dempsey, Sandi G.; Haverkamp, Richard G.; Ward, Brian R.; May, Barnaby C. H.

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A functional extracellular matrix biomaterial derived from ovine forestomach

BIOMATERIALS

IF12.9

2010-06-01

PREAI

Lun, Stan; Irvine, Sharleen M.; Johnson, Keryn D.; Fisher, Neil J.; Floden, Evan W.; Negron, Leonardo; Dempsey, Sandi G.; McLaughlin, Rene J.; Vasudevamurthy, Madhusudan; Ward, Brian R.; May, Barnaby C. H.

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Research Directions