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Kaylene J. Simpson

Peter MacCallum Cancer Centre

40H-index
383Paper Count
6.9KCitation Count
Published Papers 92
Publication Date
A scalable, multi-resolution consensus clustering approach for prioritizing robust signals from high-throughput screens
err2026-05-24
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errShaine Chenxin Bao; Kathleen I Pishas; Karla J Cowley; Qiongyi Zhao; Emily C A Goodall; Ian R Henderson; Xin Liu; Evanny Marinovic; Mark S Carey; Ian G Campbell; Kaylene J Simpson; Dane Cheasley; Dalia Mizikovsky; Nathan J Palpant; null
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Identifying therapeutic targets in low-grade serous ovarian carcinomas with no specific molecular profile
err2026-05-01
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PREAI
errPishas, Kathleen, I; Cowley, Karla J.; Marinovic, Evanny; Kobel, Martin; Llaurado-Fernandez, Marta; Kim, Hannah; Bao, Shaine Chenxin; Mizikovsky, Dalia; Palpant, Nathan J.; Shrestha, Raunak; Vary, Robert; Luu, Jennii; Meunier, Liliane; Semple, Timothy; Blancafort, Pilar; Golden, Emily; Cohen, Paul A.; Carey, Mark S.; Campbell, Ian G.; Simpson, Kaylene J.; Cheasley, Dane
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macpie: scalable workflow for high-throughput transcriptomic profiling
err2025-11-07
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errNenad Bartonicek; Xin Liu; Laura Twomey; Michelle Meier; Richard Lupat; Stuart Craig; David Yoannidis; Jason Li; Tim Semple; Kaylene J Simpson; Mark X Li; Susanne Ramm
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Exploiting dysregulated iron homeostasis to eradicate persistent high-grade serous ovarian cancer
err2025-09-25
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errCarmelo Cerra; Madeleine R. C. Tancock; Niko Thio; Ada Koo; AnnRann Wong; Karla J. Cowley; Swati Varshney; Madelynne O. Willis; Kaylene J. Simpson; David D. L. Bowtell; Elaine Sanij; Elizabeth L. Christie; Richard B. Pearson; Jian Kang; Keefe T. Chan
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A CDK11-dependent RNA polymerase II pause-checkpoint precedes CDK9-mediated transition to transcriptional elongation
err2025-08-25
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errJennifer R. Devlin; Ben Martin; Nenad Bartonicek; Keziah Ting; Zheng Fan; Izabela Todorovski; Filip Bjelosevic; Sandra Verschoor; Annette Ciccone; Joseph A. Trapani; Attila Horvath; Emily Tinsley; Peter Fraser; Andrea Newbold; Jarrod J. Sandow; Andrea Muscat; Kaylene J. Simpson; Matthias Geyer; Stephin J. Vervoort; Ricky W. Johnstone
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Genome-wide analysis of host-encoded microRNAs modulating SARS-CoV-2 infection
err2025-07-31
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errChristina L. Rootes; Karla J. Cowley; Aaron M. Brice; Henry G. Beetham; Rasan Mohamed Sathiqu; Kaylene J. Simpson; Cameron R. Stewart
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GGNBP2 regulates MDA5 sensing triggered by self double-stranded RNA following loss of ADAR1 editing
err2024-11-22
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PREAI
errHeraud-Farlow, Jacki E.; Taylor, Scott R.; Chalk, Alistair M.; Escudero, Adriana; Hu, Shi-Bin; Goradia, Ankita; Sun, Tao; Li, Qin; Nikolic, Iva; Li, Jin Billy; Fidalgo, Miguel; Guallar, Diana; Simpson, Kaylene J.; Walkley, Carl R.
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CDK9 inhibition constrains multiple oncogenic transcriptional and epigenetic pathways in prostate cancer (vol 131, pg 1092, 2024)
err2024-10-24
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errRahman, Razia; Rahaman, Muhammed H.; Hanson, Adrienne R.; Choo, Nicholas; Xie, Jianling; Townley, Scott L.; Shrestha, Raj; Hassankhani, Ramin; Islam, Saiful; Ramm, Susanne; Simpson, Kaylene J.; Risbridger, Gail P.; Best, Giles; Centenera, Margaret M.; Balk, Steven P.; Kichenadasse, Ganessan; Taylor, Renea A.; Butler, Lisa M.; Tilley, Wayne D.; Conn, Simon J.; Lawrence, Mitchell G.; Wang, Shudong; Selth, Luke A.
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RNA kinetics influence the response to transcriptional perturbation in leukaemia cell lines
err2024-10-03
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errTodorovski, Izabela; Tsang, Mary-Jane; Feran, Breon; Fan, Zheng; Gadipally, Sreeja; Yoannidis, David; Kong, Isabella Y.; Bjelosevic, Stefan; Rivera, Sarahi; Voulgaris, Olivia; Zethoven, Magnus; Hawkins, Edwin D.; Simpson, Kaylene J.; Arnau, Gisela Mir; Papenfuss, Anthony T.; Johnstone, Ricky W.; Vervoort, Stephin J.
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A new method for network bioinformatics identifies novel drug targets for mucinous ovarian carcinoma
err2024-08-24
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errCraig, Olivia; Lee, Samuel; Pilcher, Courtney; Saoud, Rita; Abdirahman, Suad; Salazar, Carolina; Williams, Nathan; Ascher, David B.; Vary, Robert; Luu, Jennii; Cowley, Karla J.; Ramm, Susanne; Li, Mark Xiang; Thio, Niko; Li, Jason; Semple, Tim; Simpson, Kaylene J.; Gorringe, Kylie L.; Holien, Jessica K.
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CDK9 inhibition inhibits multiple oncogenic transcriptional and epigenetic pathways in prostate cancer
err2024-08-08
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errOAAI
errRahman, Razia; Rahaman, Muhammed H.; Hanson, Adrienne R.; Choo, Nicholas; Xie, Jianling; Townley, Scott L.; Shrestha, Raj; Hassankhani, Ramin; Islam, Saiful; Ramm, Susanne; Simpson, Kaylene J.; Risbridger, Gail P.; Best, Giles; Centenera, Margaret M.; Balk, Steven P.; Kichenadasse, Ganessan; Taylor, Renea A.; Butler, Lisa M.; Tilley, Wayne D.; Conn, Simon J.; Lawrence, Mitchell G.; Wang, Shudong; Selth, Luke A.
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Delineating functional drivers of esophageal adenocarcinoma to identify synthetic lethal interactions
err2024-06-10
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PREAI
errMilne, Julia V.; Mustafa, Ebtihal; Fujihara, Kenji; Kusnadi, Eric; Trigos, Anna; Thio, Niko; Pechlivanis, Maree; Cabalag, Carlos; Gulati, Twishi; Simpson, Kaylene; Duong, Cuong; Furic, Luc; Phillips, Wayne; Clemons, Nicholas
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CX-5461 sensitizes DNA damage repair-proficient castrate-resistant prostate cancer to PARP inhibition
err2024-06-10
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PREAI
errLawrence, Mitchell G.; Porter, Laura H.; Choo, Nicholas; Sanij, Elaine; Taylor, Renea; Pearson, Richard; Simpson, Kaylene J.; Hannan, Ross D.; Sandhu, Shahneen; Furic, Luc
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Delineating functional drivers of esophageal adenocarcinoma to identify synthetic lethal interactions
err2024-06-10
err0
PREAI
errMilne, Julia V.; Mustafa, Ebtihal; Fujihara, Kenji; Kusnadi, Eric; Trigos, Anna; Thio, Niko; Pechlivanis, Maree; Cabalag, Carlos; Gulati, Twishi; Simpson, Kaylene; Duong, Cuong; Furic, Luc; Phillips, Wayne; Clemons, Nicholas
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miR-99b-5p, miR-380-3p, and miR-485-3p are novel chemosensitizing miRNAs in high-risk neuroblastoma (vol 30, pg 1119, 2022)
err2024-06-01
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errHolliday, Holly; Yang, Jessica; Dodson, Eoin; Nikolic, Iva; Kamili, Alvin; Wheatley, Madeleine; Deng, Niantao; Alexandrou, Sarah; Davis, Thomas P.; Kavallaris, Maria; Caldon, C. Elizabeth; Mccarroll, Joshua; De Preter, Katleen; Mestdagh, Pieter; Marshall, Glenn M.; Simpson, Kaylene J.; Fletcher, Jamie; Swarbrick, Alexander
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Co-targeting BET, CBP, and p300 inhibits neuroendocrine signalling in androgen receptor-null prostate cancer
err2024-04-05
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errOAAI
errChoo, Nicholas; Keerthikumar, Shivakumar; Ramm, Susanne; Ashikari, Daisaku; Teng, Linda; Niranjan, Birunthi; Hedwards, Shelley; Porter, Laura H.; Goode, David L.; Simpson, Kaylene J.; Taylor, Renea A.; Risbridger, Gail P.; Lawrence, Mitchell G.
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Hit-to-lead optimization of 2-aminoquinazolines as anti-microbial agents against Leishmania donovani
err2024-04-01
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PREAI
errDas, Nirmal; Roy, Jayasree; Patra, Binita; Saunders, Eleanor; Sarkar, Dipika; Goon, Sunny; Sinha, Bishnu Prasad; Roy, Shreya; Roy, Swarnali; Sarif, Jafar; Bandopadhyay, Purbita; Barik, Subhasis; Mukherjee, Suravi; Mcnamara, Nicole; Varghese, Swapna; Simpson, Kaylene; Baell, Jonathan; Mcconville, Malcolm; Ganguly, Dipyaman; Talukdar, Arindam
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Multi-omics approach reveals a SMAD4-deficiency signature, translational reprogramming and synthetic lethality in esophageal adenocarcinom
err2024-03-22
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PREAI
errMilne, Julia V.; Fujihara, Kenji; Kusnadi, Eric; Pechlivanis, Maree; Thio, Niko; Cabalag, Carlos; Gulati, Twishi; Gotovac, Jovana; Simpson, Kaylene; Duong, Cuong; Furic, Luc; Phillips, Wayne; Clemons, Nicholas
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Quantitative subcellular reconstruction reveals a lipid mediated inter-organelle biogenesis network
err2023-12-21
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PREAI
errLee, Richard G.; Rudler, Danielle L.; Raven, Samuel A.; Peng, Liuyu; Chopin, Anaelle; Moh, Edward S. X.; Mccubbin, Tim; Siira, Stefan J.; Fagan, Samuel V.; Debono, Nicholas J.; Stentenbach, Maike; Browne, Jasmin; Rackham, Filip F.; Li, Ji; Simpson, Kaylene J.; Marcellin, Esteban; Packer, Nicolle H.; Reid, Gavin E.; Padman, Benjamin S.; Rackham, Oliver; Filipovska, Aleksandra
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Loss of SMAD4 unleashes mTOR and increases dependency on cap-dependent translation in esophageal tumorigenesis
err2023-12-01
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PREAI
errMilne, Julia V.; Mustafa, Ebtihal; Fujihara, Kenji; Kusnadi, Eric; Thio, Niko; Pechlivanis, Maree; Cabalag, Carlos; Gulati, Twishi; Simpson, Kaylene; Duong, Cuong; Furic, Luc; Phillips, Wayne; Clemons, Nicholas J.
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