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K

Karen H. Miga

University of California Santa Cruz
H指数:34
被引数:1.0万

个人简介

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教育背景

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荣誉奖项

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Haplotype-resolved DiMeLo-seq maps centromeric chromatin in a complete diploid human genome

单体型解析的DiMeLo-seq技术绘制完整二倍体人类基因组着丝粒染色质图谱

Cell Genomics
IF9
2026-08-120
PRE
Xu, Yuan; Loucks, Hailey; Menendez, Julian; Ryabov, Fedor; Lucas, Julian K.; Cechova, Monika; Morina, Luke; Xu, Emily; Dubocanin, Danilo; Chittenden, Cy; Asri, Mobin; Violich, Ivo; Ortiz, Christian; Gardner, Joshua M. V.; Hillaker, Todd; O'Rourke, Sara; McNulty, Brandy; Potapova, Tamara A.; Mitchell, Matthew W.; Schwartz, Jacob P.; Straight, Aaron F.; Gerton, Jennifer L.; Timp, Winston; Alexandrov, Ivan A.; Altemose, Nicolas; Miga, Karen H.
Neocentromeres fail to maintain DNA methylation boundaries, driving CENP-A drift, instability, and chromosome missegregation

新着丝粒无法维持DNA甲基化边界，导致CENP-A漂移、不稳定性和染色体错分离

Cell Reports
IF6.9
2026-08-010
PRE
Mahlke, Megan A.; Enriquez, Angela; Lumerman, Lior; Nath, Poulomi; Chittenden, Cy; Hoyt, Savannah; Koeppel, Jonas; Xu, Yuan; Raphael, Rebecca; Zaffina, Kylie; Hook, Paul W.; Timp, Winston; Miga, Karen H.; Campbell, Peter J.; O'Neill, Rachel J.; Altemose, Nicolas; Nechemia-Arbely, Yael
Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic

使用deepsmatoma实现多种测序技术的准确体细胞小变异发现

Nature Biotechnology
IF41.7
2025-10-160
PRE
Jimin Park; Daniel E. Cook; Pi-Chuan Chang; Alexey Kolesnikov; Lucas Brambrink; Juan Carlos Mier; Joshua Gardner; Brandy McNulty; Samuel Sacco; Ayse G. Keskus; Asher Bryant; Tanveer Ahmad; Jyoti Shetty; Yongmei Zhao; Bao Tran; Giuseppe Narzisi; Adrienne Helland; Byunggil Yoo; Irina Pushel; Lisa A. Lansdon; Chengpeng Bi; Adam Walter; Margaret Gibson; Tomi Pastinen; Rebecca Reiman; Sharvari Mankame; T. Rhyker Ranallo-Benavidez; Christine Brown; Nicolas Robine; Floris P. Barthel; Midhat S. Farooqi; Karen H. Miga; Andrew Carroll; Mikhail Kolmogorov; Benedict Paten; Kishwar Shafin
Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes

人科基因组中核糖体DNA数组的染色体特异性表观遗传调控与传递

Cell Genomics
IF9
2025-10-020
OAAI
Tamara A. Potapova; Paxton Kostos; Sean McKinney; Matthew Borchers; Jeff Haug; Andrea Guarracino; Steven J. Solar; Mark Mattingly; Graciela Monfort Anez; Leonardo Gomes de Lima; Yan Wang; Chongbei Zhao; Kate Hall; Madelaine Gogol; Sophie Hoffman; Dmitry Antipov; Arang Rhie; Monika Cechova; Karen H. Miga; Erik Garrison; Adam M. Phillippy; Jennifer L. Gerton
DNA methylation influences human centromere positioning and function

DNA甲基化影响人类着丝粒定位和功能

Nature Genetics
IF0
2025-09-040
OAAI
Catalina Salinas-Luypaert; Danilo Dubocanin; Rosa Jooyoung Lee; Lorena Andrade Ruiz; Riccardo Gamba; Marine Grison; Leonid Velikovsky; Annapaola Angrisani; Andrea Scelfo; Yuan Xu; Marie Dumont; Viviana Barra; Therese Wilhelm; Guillaume Velasco; Marialucrezia Losito; René Wardenaar; Claire Francastel; Floris Foijer; Geert J. P. L. Kops; Karen H. Miga; Nicolas Altemose; Daniele Fachinetti
Correction: Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

更正：开发和广泛测序一个得到广泛认可的“Genome in a Bottle”匹配的肿瘤-正常配对样本

Scientific Data
IF6.9
2025-08-080
OAAI
Jennifer H. McDaniel; Vaidehi Patel; Nathan D. Olson; Hua-Jun He; Zhiyong He; Kenneth D. Cole; Alexander A. Gooden; Anthony Schmitt; Kristin Sikkink; Fritz J. Sedlazeck; Harsha Doddapaneni; Shalini N. Jhangiani; Donna M. Muzny; Marie-Claude Gingras; Heer Mehta; Sairam Behera; Luis F. Paulin; Alex R. Hastie; Hung-Chun Yu; Victor Weigman; Alison Rojas; Katie Kennedy; Jamie Remington; Isai Salas-González; Mitch Sudkamp; Kelly Wiseman; Bryan R. Lajoie; Shawn Levy; Miten Jain; Stuart Akeson; Giuseppe Narzisi; Zoe Steinsnyder; Catherine Reeves; Jennifer Shelton; Sarah B. Kingan; Christine Lambert; Primo Baybayan; Aaron M. Wenger; Ian J. McLaughlin; Aaron Adamson; Christopher Kingsley; Melanie Wescott; Young Kim; Benedict Paten; Jimin Park; Ivo Violich; Karen H. Miga; Joshua Gardner; Brandy McNulty; Gail L. Rosen; Rajiv McCoy; Francesco Brundu; Erfan Sayyari; Konrad Scheffler; Sean Truong; Severine Catreux; Lesley Chapman Hannah; Doron Lipson; Hila Benjamin; Nika Iremadze; Ilya Soifer; Gat Krieger; Stephen Eacker; Mary Wood; Erin Cross; Greg Husar; Stephen Gross; Michael Vernich; Mikhail Kolmogorov; Tanveer Ahmad; Ayse G. Keskus; Asher Bryant; Francoise Thibaud-Nissen; Jonathan Trow; Jacqueline Proszynski; Jeremy Wain Hirschberg; Krista Ryon; Christopher E. Mason; Mital S. Bhakta; J. Zachary Sanborn; Elizabeth M. Munding; Justin Wagner; Chunlin Xiao; Andrew S. Liss; Justin M. Zook
Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

开发并广泛测序一种在Genome in a Bottle框架下获得广泛共识的匹配肿瘤-正常样本对

Scientific Data
IF6.9
2025-07-160
OAAI
Jennifer H. McDaniel; Vaidehi Patel; Nathan D. Olson; Hua-Jun He; Zhiyong He; Kenneth D. Cole; Alexander A. Gooden; Anthony Schmitt; Kristin Sikkink; Fritz J. Sedlazeck; Harsha Doddapaneni; Shalini N. Jhangiani; Donna M. Muzny; Marie-Claude Gingras; Heer Mehta; Sairam Behera; Luis F. Paulin; Alex R. Hastie; Hung-Chun Yu; Victor Weigman; Alison Rojas; Katie Kennedy; Jamie Remington; Isai Salas-González; Mitch Sudkamp; Kelly Wiseman; Bryan R. Lajoie; Shawn Levy; Miten Jain; Stuart Akeson; Giuseppe Narzisi; Zoe Steinsnyder; Catherine Reeves; Jennifer Shelton; Sarah B. Kingan; Christine Lambert; Primo Baybayan; Aaron M. Wenger; Ian J. McLaughlin; Aaron Adamson; Christopher Kingsley; Melanie Wescott; Young Kim; Benedict Paten; Jimin Park; Ivo Violich; Karen H. Miga; Joshua Gardner; Brandy McNulty; Gail L. Rosen; Rajiv McCoy; Francesco Brundu; Erfan Sayyari; Konrad Scheffler; Sean Truong; Severine Catreux; Lesley Chapman Hannah; Doron Lipson; Hila Benjamin; Nika Iremadze; Ilya Soifer; Gat Krieger; Stephen Eacker; Mary Wood; Erin Cross; Greg Husar; Stephen Gross; Michael Vernich; Mikhail Kolmogorov; Tanveer Ahmad; Ayse G. Keskus; Asher Bryant; Francoise Thibaud-Nissen; Jonathan Trow; Jacqueline Proszynski; Jeremy Wain Hirschberg; Krista Ryon; Christopher E. Mason; Mital S. Bhakta; J. Zachary Sanborn; Elizabeth M. Munding; Justin Wagner; Chunlin Xiao; Andrew S. Liss; Justin M. Zook
Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing

Severus通过长读长测序检测癌症基因组中的体细胞结构变异和复杂重排

NATURE BIOTECHNOLOGY
IF41.7
2025-04-041
PRE
Keskus, Ayse G.; Bryant, Asher; Ahmad, Tanveer; Yoo, Byunggil; Aganezov, Sergey; Goretsky, Anton; Donmez, Ataberk; Lansdon, Lisa A.; Rodriguez, Isabel; Park, Jimin; Liu, Yuelin; Cui, Xiwen; Gardner, Joshua; McNulty, Brandy; Sacco, Samuel; Shetty, Jyoti; Zhao, Yongmei; Tran, Bao; Narzisi, Giuseppe; Helland, Adrienne; Cook, Daniel E.; Chang, Pi-Chuan; Kolesnikov, Alexey; Carroll, Andrew; Molloy, Erin K.; Bi, Chengpeng; Walter, Adam; Gibson, Margaret; Pushel, Irina; Guest, Erin; Pastinen, Tomi; Shafin, Kishwar; Miga, Karen H.; Malikic, Salem; Day, Chi-Ping; Robine, Nicolas; Sahinalp, Cenk; Dean, Michael; Farooqi, Midhat S.; Paten, Benedict; Kolmogorov, Mikhail
Integrated analysis of the complete sequence of a macaque genome

恒河猴基因组完整序列的整合分析

NATURE
IF48.5
2025-02-261
PRE
Zhang, Shilong; Xu, Ning; Fu, Lianting; Yang, Xiangyu; Ma, Kaiyue; Li, Yamei; Yang, Zikun; Li, Zhengtong; Feng, Yu; Jiang, Xinrui; Han, Junmin; Hu, Ruixing; Zhang, Lu; Lian, Da; de Gennaro, Luciana; Paparella, Annalisa; Ryabov, Fedor; Meng, Dan; He, Yaoxi; Wu, Dongya; Yang, Chentao; Mao, Yuxiang; Bian, Xinyan; Lu, Yong; Antonacci, Francesca; Ventura, Mario; Shepelev, Valery A.; Miga, Karen H.; Alexandrov, Ivan A.; Logsdon, Glennis A.; Phillippy, Adam M.; Su, Bing; Zhang, Guojie; Eichler, Evan E.; Lu, Qing; Shi, Yongyong; Sun, Qiang; Mao, Yafei
The Ruminant Telomere-to-Telomere (RT2T) Consortium

反刍动物端粒到端粒（RT2T）联盟

NATURE GENETICS
IF31.8
2024-08-051
PRE
Kalbfleisch, Theodore S.; McKay, Stephanie D.; Murdoch, Brenda M.; Adelson, David L.; Almansa-Villa, Diego; Becker, Gabrielle; Beckett, Linda M.; Benitez-Galeano, Maria Jose; Biase, Fernando; Casey, Theresa; Chuong, Edward; Clark, Emily; Clarke, Shannon; Cockett, Noelle; Couldrey, Christine; Davis, Brian W.; Elsik, Christine G.; Faraut, Thomas; Gao, Yahui; Genet, Carine; Grady, Patrick; Green, Jonathan; Green, Richard; Guan, Dailu; Hagen, Darren; Hartley, Gabrielle A.; Heaton, Mike; Hoyt, Savannah J.; Huang, Wen; Jarvis, Erich; Kalleberg, Jenna; Khatib, Hasan; Koepfi, Klaus-Peter; Koltes, James; Koren, Sergey; Kuehn, Christa; Leeb, Tosso; Leonard, Alexander; Liu, George E.; Low, Wai Yee; Mcconnell, Hunter; Mcrae, Kathryn; Miga, Karen; Mousel, Michelle; Neibergs, Holly; Olagunju, Temitayo; Pennell, Matt; Petry, Bruna; Pewsner, Mirjam; Phillippy, Adam M.; Pickett, Brandon D.; Pineda, Paulene; Potapova, Tamara; Rachagani, Satyanarayana; Rhie, Arang; Rijnkels, Monique; Robic, Annie; Rodriguez Osorio, Nelida; Safonova, Yana; Schettini, Gustavo; Schnabel, Robert D.; Sirpu Natesh, Nagabhishek; Stegemiller, Morgan; Storer, Jessica; Stothard, Paul; Stull, Caleb; Tosser-Klopp, Gwenola; Traglia, German M.; Tuggle, Christopher K.; Van Tassell, Curtis P.; Watson, Corey; Weikard, Rosemarie; Wimmers, Klaus; Xie, Shangqian; Yang, Liu; Smith, Timothy P. L.; O'Neill, Rachel J.; Rosen, Benjamin D.
The complete sequence and comparative analysis of ape sex chromosomes

猿类性染色体的全序列及比较分析

Nature
IF48.5
2024-05-290
OAAI
Kateryna D. Makova; Brandon D. Pickett; Robert S. Harris; Gabrielle A. Hartley; Monika Cechova; Karol Pal; Sergey Nurk; DongAhn Yoo; Qiuhui Li; Prajna Hebbar; Barbara C. McGrath; Francesca Antonacci; Margaux Aubel; Arjun Biddanda; Matthew Borchers; Erich Bornberg-Bauer; Gerard G. Bouffard; Shelise Y. Brooks; Lucia Carbone; Laura Carrel; Andrew Carroll; Pi-Chuan Chang; Chen-Shan Chin; Daniel E. Cook; Sarah J. C. Craig; Luciana de Gennaro; Mark Diekhans; Amalia Dutra; Gage H. Garcia; Patrick G. S. Grady; Richard E. Green; Diana Haddad; Pille Hallast; William T. Harvey; Glenn Hickey; David A. Hillis; Savannah J. Hoyt; Hyeonsoo Jeong; Kaivan Kamali; Sergei L. Kosakovsky Pond; Troy M. LaPolice; Charles Lee; Alexandra P. Lewis; Yong-Hwee E. Loh; Patrick Masterson; Kelly M. McGarvey; Rajiv C. McCoy; Paul Medvedev; Karen H. Miga; Katherine M. Munson; Evgenia Pak; Benedict Paten; Brendan J. Pinto; Tamara Potapova; Arang Rhie; Joana L. Rocha; Fedor Ryabov; Oliver A. Ryder; Samuel Sacco; Kishwar Shafin; Valery A. Shepelev; Viviane Slon; Steven J. Solar; Jessica M. Storer; Peter H. Sudmant; Sweetalana; Alex Sweeten; Michael G. Tassia; Françoise Thibaud-Nissen; Mario Ventura; Melissa A. Wilson; Alice C. Young; Huiqing Zeng; Xinru Zhang; Zachary A. Szpiech; Christian D. Huber; Jennifer L. Gerton; Soojin V. Yi; Michael C. Schatz; Ivan A. Alexandrov; Sergey Koren; Rachel J. O’Neill; Evan E. Eichler; Adam M. Phillippy
Phased nanopore assembly with Shasta and modular graph phasing with GFAse

用Shasta进行的分相纳米孔组装和用GFAse进行的模块化图形分相

GENOME RESEARCH
IF5.5
2024-04-163
OA
Lorig-Roach, Ryan; Meredith, Melissa; Monlong, Jean; Jain, Miten; Olsen, Hugh E.; Mcnulty, Brandy; Porubsky, David; Montague, Tessa G.; Lucas, Julian K.; Condon, Chris; Eizenga, Jordan M.; Juul, Sissel; Mckenzie, Sean K.; Simmonds, Sara E.; Park, Jimin; Asri, Mobin; Koren, Sergey; Eichler, Evan E.; Axel, Richard; Martin, Bruce; Carnevali, Paolo; Miga, Karen H.; Paten, Benedict
Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation
NATURE METHODS
IF32.1
2023-09-1428
OA
Kolmogorov, Mikhail; Billingsley, Kimberley J.; Mastoras, Mira; Meredith, Melissa; Monlong, Jean; Lorig-Roach, Ryan; Asri, Mobin; Alvarez Jerez, Pilar; Malik, Laksh; Dewan, Ramita; Reed, Xylena; Genner, Rylee M.; Daida, Kensuke; Behera, Sairam; Shafin, Kishwar; Pesout, Trevor; Prabakaran, Jeshuwin; Carnevali, Paolo; Yang, Jianzhi; Rhie, Arang; Scholz, Sonja W.; Traynor, Bryan J.; Miga, Karen H.; Jain, Miten; Timp, Winston; Phillippy, Adam M.; Chaisson, Mark; Sedlazeck, Fritz J.; Blauwendraat, Cornelis; Paten, Benedict
The complete sequence of a human Y chromosome

人类Y染色体的完整序列

Nature
IF48.5
2023-08-230
PRE
Arang Rhie; Sergey Nurk; Monika Cechova; Savannah J. Hoyt; Dylan J. Taylor; Nicolas Altemose; Paul W. Hook; Sergey Koren; Mikko Rautiainen; Ivan A. Alexandrov; Jamie Allen; Mobin Asri; Andrey V. Bzikadze; Nae-Chyun Chen; Chen-Shan Chin; Mark Diekhans; Paul Flicek; Giulio Formenti; Arkarachai Fungtammasan; Carlos Garcia Giron; Erik Garrison; Ariel Gershman; Jennifer L. Gerton; Patrick G. S. Grady; Andrea Guarracino; Leanne Haggerty; Reza Halabian; Nancy F. Hansen; Robert Harris; Gabrielle A. Hartley; William T. Harvey; Marina Haukness; Jakob Heinz; Thibaut Hourlier; Robert M. Hubley; Sarah E. Hunt; Stephen Hwang; Miten Jain; Rupesh K. Kesharwani; Alexandra P. Lewis; Heng Li; Glennis A. Logsdon; Julian K. Lucas; Wojciech Makalowski; Christopher Markovic; Fergal J. Martin; Ann M. Mc Cartney; Rajiv C. McCoy; Jennifer McDaniel; Brandy M. McNulty; Paul Medvedev; Alla Mikheenko; Katherine M. Munson; Terence D. Murphy; Hugh E. Olsen; Nathan D. Olson; Luis F. Paulin; David Porubsky; Tamara Potapova; Fedor Ryabov; Steven L. Salzberg; Michael E. G. Sauria; Fritz J. Sedlazeck; Kishwar Shafin; Valery A. Shepelev; Alaina Shumate; Jessica M. Storer; Likhitha Surapaneni; Angela M. Taravella Oill; Françoise Thibaud-Nissen; Winston Timp; Marta Tomaszkiewicz; Mitchell R. Vollger; Brian P. Walenz; Allison C. Watwood; Matthias H. Weissensteiner; Aaron M. Wenger; Melissa A. Wilson; Samantha Zarate; Yiming Zhu; Justin M. Zook; Evan E. Eichler; Rachel J. O’Neill; Michael C. Schatz; Karen H. Miga; Kateryna D. Makova; Adam M. Phillippy

研究方向

暂未获取到该数据
B
Benedict Paten
H 指数:95论文数:370被引数:5.1万
A
Adam M. Phillippy
H 指数:94论文数:353被引数:7.7万
M
Miten Jain
H 指数:43论文数:146被引数:1.7万
E
Evan E. Eichler
H 指数:191论文数:878被引数:20.8万
S
Sergey Koren
H 指数:87论文数:323被引数:7.3万
K
Kishwar Shafin
H 指数:29论文数:75被引数:9,689
A
Arang Rhie
H 指数:53论文数:181被引数:2.5万
J
Justin M. Zook
H 指数:54论文数:235被引数:1.8万
M
Mikhail Kolmogorov
H 指数:25论文数:123被引数:1.4万
B
Brandy McNulty
H 指数:11论文数:38被引数:721